RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 B9D1Q9UPM9 204 aa23.52■■□□□ 1.36
HLA-C-208ENST00000487245 A0A1B0GTH9 108 aa23.51■■□□□ 1.35
HLA-C-208ENST00000487245 PRSS37A4D1T9 235 aa23.51■■□□□ 1.35
HLA-C-208ENST00000487245 AHSA1O95433 338 aa23.51■■□□□ 1.35
HLA-C-208ENST00000487245 IFNA7P01567 189 aa23.51■■□□□ 1.35
HLA-C-208ENST00000487245 LINC00303Q3SY05 128 aa23.51■■□□□ 1.35
HLA-C-208ENST00000487245 GLB1L2Q8IW92 636 aa23.51■■□□□ 1.35
HLA-C-208ENST00000487245 UXS1Q8NBZ7 420 aa23.51■■□□□ 1.35
HLA-C-208ENST00000487245 DUSP19Q8WTR2 217 aa23.51■■□□□ 1.35
HLA-C-208ENST00000487245 THEM6Q8WUY1 208 aa23.51■■□□□ 1.35
HLA-C-208ENST00000487245 TMEM106AQ96A25 262 aa23.51■■□□□ 1.35
HLA-C-208ENST00000487245 VSX1Q9NZR4 365 aaPredicted RBP23.51■■□□□ 1.35
HLA-C-208ENST00000487245 H7C417 338 aa23.51■■□□□ 1.35
HLA-C-208ENST00000487245 GIPP09681 153 aaPredicted RBP23.51■■□□□ 1.35
HLA-C-208ENST00000487245 RAD52P43351 418 aa23.51■■□□□ 1.35
HLA-C-208ENST00000487245 SLC17A1Q14916 467 aa23.51■■□□□ 1.35
HLA-C-208ENST00000487245 ACKR1Q16570 336 aa23.51■■□□□ 1.35
HLA-C-208ENST00000487245 ZNF626Q68DY1 528 aa23.51■■□□□ 1.35
HLA-C-208ENST00000487245 ANKRD16Q6P6B7 361 aa23.51■■□□□ 1.35
HLA-C-208ENST00000487245 DNAAF1Q8NEP3 725 aa23.51■■□□□ 1.35
HLA-C-208ENST00000487245 CLEC4MQ9H2X3 399 aaPredicted RBP23.51■■□□□ 1.35
HLA-C-208ENST00000487245 SLC17A5Q9NRA2 495 aa23.51■■□□□ 1.35
HLA-C-208ENST00000487245 TAS2R8Q9NYW2 309 aa23.51■■□□□ 1.35
HLA-C-208ENST00000487245 MTFP1Q9UDX5 166 aa23.51■■□□□ 1.35
HLA-C-208ENST00000487245 CPAMD8Q8IZJ3 1885 aa23.5■■□□□ 1.35
HLA-C-208ENST00000487245 SEC16AO15027 2179 aa23.5■■□□□ 1.35
HLA-C-208ENST00000487245 A0A1W2PQ72 361 aa23.5■■□□□ 1.35
HLA-C-208ENST00000487245 HEXBP07686 556 aa23.5■■□□□ 1.35
HLA-C-208ENST00000487245 DCTDP32321 178 aa23.5■■□□□ 1.35
HLA-C-208ENST00000487245 FAUP35544 74 aaKnown RBP23.5■■□□□ 1.35
HLA-C-208ENST00000487245 TOMM20Q15388 145 aa23.5■■□□□ 1.35
HLA-C-208ENST00000487245 WDR38Q5JTN6 314 aa23.5■■□□□ 1.35
HLA-C-208ENST00000487245 ANKRD37Q7Z713 158 aa23.5■■□□□ 1.35
HLA-C-208ENST00000487245 OR10AC1Q8NH08 325 aa23.5■■□□□ 1.35
HLA-C-208ENST00000487245 ST8SIA1Q92185 356 aa23.5■■□□□ 1.35
HLA-C-208ENST00000487245 ADAMTS20P59510 1910 aa23.5■■□□□ 1.35
HLA-C-208ENST00000487245 PLPP3O14495 311 aa23.49■■□□□ 1.35
HLA-C-208ENST00000487245 ZNF81P51508 661 aa23.49■■□□□ 1.35
HLA-C-208ENST00000487245 SUMO3P55854 103 aaPredicted RBP23.49■■□□□ 1.35
HLA-C-208ENST00000487245 ROM1Q03395 351 aa23.49■■□□□ 1.35
HLA-C-208ENST00000487245 SNTA1Q13424 505 aa23.49■■□□□ 1.35
HLA-C-208ENST00000487245 TEX30Q5JUR7 227 aa23.49■■□□□ 1.35
HLA-C-208ENST00000487245 CLLU1Q5K131 121 aa23.49■■□□□ 1.35
HLA-C-208ENST00000487245 NUBPLQ8TB37 319 aa23.49■■□□□ 1.35
HLA-C-208ENST00000487245 RNF128Q8TEB7 428 aa23.49■■□□□ 1.35
HLA-C-208ENST00000487245 AMELYQ99218 206 aa23.49■■□□□ 1.35
HLA-C-208ENST00000487245 PIPOXQ9P0Z9 390 aa23.49■■□□□ 1.35
HLA-C-208ENST00000487245 EIF3KQ9UBQ5 218 aaKnown RBP23.49■■□□□ 1.35
HLA-C-208ENST00000487245 KCNG2Q9UJ96 466 aa23.49■■□□□ 1.35
HLA-C-208ENST00000487245 UNC13CQ8NB66 2214 aa23.49■■□□□ 1.35
HLA-C-208ENST00000487245 ANKUB1A6NFN9 424 aa23.49■■□□□ 1.35
HLA-C-208ENST00000487245 C17orf51A8MQB3 221 aa23.49■■□□□ 1.35
HLA-C-208ENST00000487245 MAS1P04201 325 aa23.49■■□□□ 1.35
HLA-C-208ENST00000487245 AP2S1P53680 142 aaPredicted RBP23.49■■□□□ 1.35
HLA-C-208ENST00000487245 C17orf67Q0P5P2 114 aa23.49■■□□□ 1.35
HLA-C-208ENST00000487245 MFSD13AQ14CX5 517 aa23.49■■□□□ 1.35
HLA-C-208ENST00000487245 NR0B2Q15466 257 aa23.49■■□□□ 1.35
HLA-C-208ENST00000487245 SLC25A25Q6KCM7 469 aa23.49■■□□□ 1.35
HLA-C-208ENST00000487245 ELMOD2Q8IZ81 293 aa23.49■■□□□ 1.35
HLA-C-208ENST00000487245 NFAM1Q8NET5 270 aaPredicted RBP23.49■■□□□ 1.35
HLA-C-208ENST00000487245 CREBL2O60519 120 aaPredicted RBP23.48■■□□□ 1.35
HLA-C-208ENST00000487245 RBBP9O75884 186 aa23.48■■□□□ 1.35
HLA-C-208ENST00000487245 OR2A4O95047 310 aa23.48■■□□□ 1.35
HLA-C-208ENST00000487245 MPC2O95563 127 aa23.48■■□□□ 1.35
HLA-C-208ENST00000487245 C4BPBP20851 252 aa23.48■■□□□ 1.35
HLA-C-208ENST00000487245 RAP2BP61225 183 aa23.48■■□□□ 1.35
HLA-C-208ENST00000487245 SSBP1Q04837 148 aaKnown RBP23.48■■□□□ 1.35
HLA-C-208ENST00000487245 PUDPQ08623 228 aa23.48■■□□□ 1.35
HLA-C-208ENST00000487245 NKAIN1Q4KMZ8 207 aa23.48■■□□□ 1.35
HLA-C-208ENST00000487245 ZNF679Q8IYX0 411 aa23.48■■□□□ 1.35
HLA-C-208ENST00000487245 OR2A7Q96R45 310 aa23.48■■□□□ 1.35
HLA-C-208ENST00000487245 SEC22CQ9BRL7 303 aa23.48■■□□□ 1.35
HLA-C-208ENST00000487245 DPCDQ9BVM2 203 aaPredicted RBP23.48■■□□□ 1.35
HLA-C-208ENST00000487245 TMPRSS13Q9BYE2 586 aa23.48■■□□□ 1.35
HLA-C-208ENST00000487245 ELOVL3Q9HB03 270 aa23.48■■□□□ 1.35
HLA-C-208ENST00000487245 MGAT4CQ9UBM8 478 aa23.48■■□□□ 1.35
HLA-C-208ENST00000487245 PPIEQ9UNP9 301 aaKnown RBP23.48■■□□□ 1.35
HLA-C-208ENST00000487245 PCDHGA5Q9Y5G8 931 aa23.48■■□□□ 1.35
HLA-C-208ENST00000487245 IGLV1-36A0A0B4J1U3 117 aa23.47■■□□□ 1.35
HLA-C-208ENST00000487245 SHOXO15266 292 aa23.47■■□□□ 1.35
HLA-C-208ENST00000487245 ALDOBP05062 364 aa23.47■■□□□ 1.35
HLA-C-208ENST00000487245 CSF1P09603 554 aa23.47■■□□□ 1.35
HLA-C-208ENST00000487245 TMIGD3P0DMS9 266 aaPredicted RBP23.47■■□□□ 1.35
HLA-C-208ENST00000487245 SDHBP21912 280 aa23.47■■□□□ 1.35
HLA-C-208ENST00000487245 SLC18B1Q6NT16 456 aa23.47■■□□□ 1.35
HLA-C-208ENST00000487245 SHISA6Q6ZSJ9 500 aa23.47■■□□□ 1.35
HLA-C-208ENST00000487245 OR8H3Q8N146 312 aa23.47■■□□□ 1.35
HLA-C-208ENST00000487245 ZNF248Q8NDW4 579 aa23.47■■□□□ 1.35
HLA-C-208ENST00000487245 UBQLN2Q9UHD9 624 aa23.47■■□□□ 1.35
HLA-C-208ENST00000487245 RPS10-NUDT3A0A1W2PQS6 291 aa23.47■■□□□ 1.35
HLA-C-208ENST00000487245 OR2M5A3KFT3 312 aa23.47■■□□□ 1.35
HLA-C-208ENST00000487245 GGT3PA6NGU5 568 aa23.47■■□□□ 1.35
HLA-C-208ENST00000487245 TUBAL3A6NHL2 446 aa23.47■■□□□ 1.35
HLA-C-208ENST00000487245 ADAM10O14672 748 aa23.47■■□□□ 1.35
HLA-C-208ENST00000487245 ALOX12BO75342 701 aa23.47■■□□□ 1.35
HLA-C-208ENST00000487245 CTAG2O75638 210 aa23.47■■□□□ 1.35
HLA-C-208ENST00000487245 HLA-DQA2P01906 255 aa23.47■■□□□ 1.35
HLA-C-208ENST00000487245 PTHLHP12272 177 aa23.47■■□□□ 1.35
HLA-C-208ENST00000487245 NAGAP17050 411 aa23.47■■□□□ 1.35
HLA-C-208ENST00000487245 RP1P56715 2156 aa23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms