RNA–Protein interactions for RNA: ENST00000487215.1

SMPDL3A-202, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2

Gene SMPDL3A, Length 903 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-202ENST00000487215 ZSCAN5BA6NJL1 495 aa16.46■□□□□ 0.23
SMPDL3A-202ENST00000487215 CPSF4LA6NMK7 179 aaKnown RBP16.46■□□□□ 0.23
SMPDL3A-202ENST00000487215 PPIAL4DF5H284 164 aa16.46■□□□□ 0.23
SMPDL3A-202ENST00000487215 KPNA4O00629 521 aaPredicted RBP16.46■□□□□ 0.23
SMPDL3A-202ENST00000487215 POLR3GO15318 223 aaPredicted RBP16.46■□□□□ 0.23
SMPDL3A-202ENST00000487215 PPIAL4FP0DN26 164 aa16.46■□□□□ 0.23
SMPDL3A-202ENST00000487215 GPX2P18283 190 aa16.46■□□□□ 0.23
SMPDL3A-202ENST00000487215 CCNOP22674 350 aa16.46■□□□□ 0.23
SMPDL3A-202ENST00000487215 MPV17P39210 176 aa16.46■□□□□ 0.23
SMPDL3A-202ENST00000487215 ZNF84P51523 738 aa16.46■□□□□ 0.23
SMPDL3A-202ENST00000487215 CLRN1P58418 232 aa16.46■□□□□ 0.23
SMPDL3A-202ENST00000487215 DEFA6Q01524 100 aa16.46■□□□□ 0.23
SMPDL3A-202ENST00000487215 HSF2Q03933 536 aa16.46■□□□□ 0.23
SMPDL3A-202ENST00000487215 SLC3A1Q07837 685 aa16.46■□□□□ 0.23
SMPDL3A-202ENST00000487215 PABPC1L2AQ5JQF8 200 aa16.46■□□□□ 0.23
SMPDL3A-202ENST00000487215 ENTPD8Q5MY95 495 aa16.46■□□□□ 0.23
SMPDL3A-202ENST00000487215 TTC33Q6PID6 262 aaPredicted RBP16.46■□□□□ 0.23
SMPDL3A-202ENST00000487215 BLOC1S3Q6QNY0 202 aa16.46■□□□□ 0.23
SMPDL3A-202ENST00000487215 TREML4Q6UXN2 200 aa16.46■□□□□ 0.23
SMPDL3A-202ENST00000487215 NOXO1Q8NFA2 376 aa16.46■□□□□ 0.23
SMPDL3A-202ENST00000487215 OR6T1Q8NGN1 323 aa16.46■□□□□ 0.23
SMPDL3A-202ENST00000487215 ST7LQ8TDW4 575 aa16.46■□□□□ 0.23
SMPDL3A-202ENST00000487215 POP5Q969H6 163 aaKnown RBP16.46■□□□□ 0.23
SMPDL3A-202ENST00000487215 MARS2Q96GW9 593 aaKnown RBP16.46■□□□□ 0.23
SMPDL3A-202ENST00000487215 C1orf147Q96MC9 270 aaPredicted RBP16.46■□□□□ 0.23
SMPDL3A-202ENST00000487215 ZNF69Q9UC07 566 aa16.46■□□□□ 0.23
SMPDL3A-202ENST00000487215 PLSCR5A0PG75 271 aa16.45■□□□□ 0.22
SMPDL3A-202ENST00000487215 FOXH1O75593 365 aa16.45■□□□□ 0.22
SMPDL3A-202ENST00000487215 ASAH2BP0C7U1 165 aa16.45■□□□□ 0.22
SMPDL3A-202ENST00000487215 GCH1P30793 250 aa16.45■□□□□ 0.22
SMPDL3A-202ENST00000487215 WNT5AP41221 380 aa16.45■□□□□ 0.22
SMPDL3A-202ENST00000487215 HNRNPA0Q13151 305 aaKnown RBP16.45■□□□□ 0.22
SMPDL3A-202ENST00000487215 DUSP7Q16829 419 aa16.45■□□□□ 0.22
SMPDL3A-202ENST00000487215 ZNF718Q3SXZ3 478 aa16.45■□□□□ 0.22
SMPDL3A-202ENST00000487215 ARMCX4Q5H9R4 360 aa16.45■□□□□ 0.22
SMPDL3A-202ENST00000487215 THEM4Q5T1C6 240 aa16.45■□□□□ 0.22
SMPDL3A-202ENST00000487215 GPR32P1Q8NGA4 272 aa16.45■□□□□ 0.22
SMPDL3A-202ENST00000487215 SPDL1Q96EA4 605 aa16.45■□□□□ 0.22
SMPDL3A-202ENST00000487215 C7orf26Q96N11 449 aa16.45■□□□□ 0.22
SMPDL3A-202ENST00000487215 SEPHS2Q99611 448 aa16.45■□□□□ 0.22
SMPDL3A-202ENST00000487215 MRPL13Q9BYD1 178 aaKnown RBP16.45■□□□□ 0.22
SMPDL3A-202ENST00000487215 EGLN1Q9GZT9 426 aa16.45■□□□□ 0.22
SMPDL3A-202ENST00000487215 UNKLQ9H9P5 680 aaKnown RBP16.45■□□□□ 0.22
SMPDL3A-202ENST00000487215 MMP26Q9NRE1 261 aa16.45■□□□□ 0.22
SMPDL3A-202ENST00000487215 PURGQ9UJV8 347 aaKnown RBP16.45■□□□□ 0.22
SMPDL3A-202ENST00000487215 NUP50Q9UKX7 468 aa16.45■□□□□ 0.22
SMPDL3A-202ENST00000487215 CORO2BQ9UQ03 480 aa16.45■□□□□ 0.22
SMPDL3A-202ENST00000487215 ANGPT4Q9Y264 503 aa16.45■□□□□ 0.22
SMPDL3A-202ENST00000487215 OPN1SWP03999 348 aa16.44■□□□□ 0.22
SMPDL3A-202ENST00000487215 HIST1H2ABP04908 130 aa16.44■□□□□ 0.22
SMPDL3A-202ENST00000487215 ADH4P08319 380 aa16.44■□□□□ 0.22
SMPDL3A-202ENST00000487215 UMPSP11172 480 aa16.44■□□□□ 0.22
SMPDL3A-202ENST00000487215 STOMP27105 288 aa16.44■□□□□ 0.22
SMPDL3A-202ENST00000487215 ATP4BP51164 291 aa16.44■□□□□ 0.22
SMPDL3A-202ENST00000487215 PCBP3P57721 371 aaKnown RBP16.44■□□□□ 0.22
SMPDL3A-202ENST00000487215 SPRNQ5BIV9 151 aa16.44■□□□□ 0.22
SMPDL3A-202ENST00000487215 KLF17Q5JT82 389 aaPredicted RBP16.44■□□□□ 0.22
SMPDL3A-202ENST00000487215 HIST3H2AQ7L7L0 130 aa16.44■□□□□ 0.22
SMPDL3A-202ENST00000487215 NANOGNBQ7Z5D8 188 aa16.44■□□□□ 0.22
SMPDL3A-202ENST00000487215 TSPYL5Q86VY4 417 aaPredicted RBP16.44■□□□□ 0.22
SMPDL3A-202ENST00000487215 RBM45Q8IUH3 476 aaKnown RBP16.44■□□□□ 0.22
SMPDL3A-202ENST00000487215 BCL6BQ8N143 479 aaPredicted RBP16.44■□□□□ 0.22
SMPDL3A-202ENST00000487215 SYT14Q8NB59 555 aa16.44■□□□□ 0.22
SMPDL3A-202ENST00000487215 OR4D11Q8NGI4 311 aa16.44■□□□□ 0.22
SMPDL3A-202ENST00000487215 SLC25A40Q8TBP6 338 aa16.44■□□□□ 0.22
SMPDL3A-202ENST00000487215 ADAMTS16Q8TE57 1224 aa16.44■□□□□ 0.22
SMPDL3A-202ENST00000487215 GEMIN6Q8WXD5 167 aaKnown RBP16.44■□□□□ 0.22
SMPDL3A-202ENST00000487215 HIST1H2ACQ93077 130 aa16.44■□□□□ 0.22
SMPDL3A-202ENST00000487215 POM121L2Q96KW2 1035 aa16.44■□□□□ 0.22
SMPDL3A-202ENST00000487215 ZNF426Q9BUY5 554 aa16.44■□□□□ 0.22
SMPDL3A-202ENST00000487215 ZMAT3Q9HA38 289 aaKnown RBP16.44■□□□□ 0.22
SMPDL3A-202ENST00000487215 DCAF16Q9NXF7 216 aa16.44■□□□□ 0.22
SMPDL3A-202ENST00000487215 CCDC167Q9P0B6 97 aa16.44■□□□□ 0.22
SMPDL3A-202ENST00000487215 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.44■□□□□ 0.22
SMPDL3A-202ENST00000487215 SLC7A7Q9UM01 511 aa16.44■□□□□ 0.22
SMPDL3A-202ENST00000487215 WNK2Q9Y3S1 2297 aa16.44■□□□□ 0.22
SMPDL3A-202ENST00000487215 ARHGAP32A7KAX9 2087 aa16.43■□□□□ 0.22
SMPDL3A-202ENST00000487215 EVPLLA8MZ36 301 aa16.43■□□□□ 0.22
SMPDL3A-202ENST00000487215 MGRN1O60291 552 aa16.43■□□□□ 0.22
SMPDL3A-202ENST00000487215 ZNF32P17041 273 aa16.43■□□□□ 0.22
SMPDL3A-202ENST00000487215 ZNF133P52736 654 aaPredicted RBP16.43■□□□□ 0.22
SMPDL3A-202ENST00000487215 BEND6Q5SZJ8 279 aaPredicted RBP16.43■□□□□ 0.22
SMPDL3A-202ENST00000487215 C10orf128Q5T292 105 aa16.43■□□□□ 0.22
SMPDL3A-202ENST00000487215 AGBL2Q5U5Z8 902 aa16.43■□□□□ 0.22
SMPDL3A-202ENST00000487215 MBNL2Q5VZF2 373 aaKnown RBP16.43■□□□□ 0.22
SMPDL3A-202ENST00000487215 RFPL4BQ6ZWI9 263 aa16.43■□□□□ 0.22
SMPDL3A-202ENST00000487215 PTOV1Q86YD1 416 aa16.43■□□□□ 0.22
SMPDL3A-202ENST00000487215 VANGL1Q8TAA9 524 aaPredicted RBP16.43■□□□□ 0.22
SMPDL3A-202ENST00000487215 KLF14Q8TD94 323 aaPredicted RBP16.43■□□□□ 0.22
SMPDL3A-202ENST00000487215 LRRC8CQ8TDW0 803 aa16.43■□□□□ 0.22
SMPDL3A-202ENST00000487215 ASB10Q8WXI3 467 aa16.43■□□□□ 0.22
SMPDL3A-202ENST00000487215 ZNF48Q96MX3 618 aaPredicted RBP16.43■□□□□ 0.22
SMPDL3A-202ENST00000487215 GPA33Q99795 319 aa16.43■□□□□ 0.22
SMPDL3A-202ENST00000487215 CPPED1Q9BRF8 314 aaPredicted RBP16.43■□□□□ 0.22
SMPDL3A-202ENST00000487215 CCDC28BQ9BUN5 200 aa16.43■□□□□ 0.22
SMPDL3A-202ENST00000487215 SLC19A3Q9BZV2 496 aa16.43■□□□□ 0.22
SMPDL3A-202ENST00000487215 OR2J1Q9GZK6 312 aa16.43■□□□□ 0.22
SMPDL3A-202ENST00000487215 SIAEQ9HAT2 523 aa16.43■□□□□ 0.22
SMPDL3A-202ENST00000487215 NPHS2Q9NP85 383 aa16.43■□□□□ 0.22
SMPDL3A-202ENST00000487215 CCNB1IP1Q9NPC3 277 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 109.5 ms