RNA–Protein interactions for RNA: ENST00000484581.6

VPS13A-211, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2 BASIC

Gene VPS13A, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-211ENST00000484581 ZNF275Q9NSD4 429 aaPredicted RBP3.31□□□□□ -1.88
VPS13A-211ENST00000484581 VNN3Q9NY84 501 aa3.31□□□□□ -1.88
VPS13A-211ENST00000484581 TMEM9Q9P0T7 183 aa3.31□□□□□ -1.88
VPS13A-211ENST00000484581 SLC25A15Q9Y619 301 aa3.31□□□□□ -1.88
VPS13A-211ENST00000484581 UBN2Q6ZU65 1347 aa3.3□□□□□ -1.88
VPS13A-211ENST00000484581 LOC100506127A0A0U1RQW1 187 aa3.3□□□□□ -1.88
VPS13A-211ENST00000484581 ZNF816-ZNF321PA0A0X1KG74 233 aa3.3□□□□□ -1.88
VPS13A-211ENST00000484581 LINC00854A0A1B0GVQ3 168 aa3.3□□□□□ -1.88
VPS13A-211ENST00000484581 A0A1B0GVY2 172 aa3.3□□□□□ -1.88
VPS13A-211ENST00000484581 F6UB75 175 aa3.3□□□□□ -1.88
VPS13A-211ENST00000484581 BCL2L11O43521 198 aa3.3□□□□□ -1.88
VPS13A-211ENST00000484581 HSBP1O75506 76 aa3.3□□□□□ -1.88
VPS13A-211ENST00000484581 FARS2O95363 451 aaKnown RBP3.3□□□□□ -1.88
VPS13A-211ENST00000484581 HBE1P02100 147 aa3.3□□□□□ -1.88
VPS13A-211ENST00000484581 HPNP05981 417 aa3.3□□□□□ -1.88
VPS13A-211ENST00000484581 CLTAP09496 248 aa3.3□□□□□ -1.88
VPS13A-211ENST00000484581 FOLR1P15328 257 aa3.3□□□□□ -1.88
VPS13A-211ENST00000484581 COX7A1P24310 79 aa3.3□□□□□ -1.88
VPS13A-211ENST00000484581 AK4P27144 223 aaPredicted RBP3.3□□□□□ -1.88
VPS13A-211ENST00000484581 CD151P48509 253 aa3.3□□□□□ -1.88
VPS13A-211ENST00000484581 PSMD4P55036 377 aaKnown RBP3.3□□□□□ -1.88
VPS13A-211ENST00000484581 UBE2MP61081 183 aaKnown RBP3.3□□□□□ -1.88
VPS13A-211ENST00000484581 RPS15AP62244 130 aaKnown RBP3.3□□□□□ -1.88
VPS13A-211ENST00000484581 LCN2P80188 198 aa3.3□□□□□ -1.88
VPS13A-211ENST00000484581 ZNF33AQ06730 810 aa3.3□□□□□ -1.88
VPS13A-211ENST00000484581 CDH17Q12864 832 aa3.3□□□□□ -1.88
VPS13A-211ENST00000484581 KIAA0087Q14695 138 aa3.3□□□□□ -1.88
VPS13A-211ENST00000484581 PSMD5Q16401 504 aa3.3□□□□□ -1.88
VPS13A-211ENST00000484581 NRF1Q16656 503 aa3.3□□□□□ -1.88
VPS13A-211ENST00000484581 KYAT1Q16773 422 aa3.3□□□□□ -1.88
VPS13A-211ENST00000484581 FAM83EQ2M2I3 478 aa3.3□□□□□ -1.88
VPS13A-211ENST00000484581 RPEL1Q2QD12 228 aa3.3□□□□□ -1.88
VPS13A-211ENST00000484581 Q3ZCU0 254 aa3.3□□□□□ -1.88
VPS13A-211ENST00000484581 TMEM179BQ7Z7N9 219 aa3.3□□□□□ -1.88
VPS13A-211ENST00000484581 FBXO16Q8IX29 292 aaPredicted RBP3.3□□□□□ -1.88
VPS13A-211ENST00000484581 TRIML2Q8N7C3 387 aa3.3□□□□□ -1.88
VPS13A-211ENST00000484581 OR4A15Q8NGL6 344 aa3.3□□□□□ -1.88
VPS13A-211ENST00000484581 OR1N2Q8NGR9 330 aa3.3□□□□□ -1.88
VPS13A-211ENST00000484581 OR2A1Q8NGT9 310 aa3.3□□□□□ -1.88
VPS13A-211ENST00000484581 NEIL3Q8TAT5 605 aa3.3□□□□□ -1.88
VPS13A-211ENST00000484581 NUBPLQ8TB37 319 aa3.3□□□□□ -1.88
VPS13A-211ENST00000484581 MRAPQ8TCY5 172 aa3.3□□□□□ -1.88
VPS13A-211ENST00000484581 SDR42E1Q8WUS8 393 aa3.3□□□□□ -1.88
VPS13A-211ENST00000484581 ARPC1AQ92747 370 aa3.3□□□□□ -1.88
VPS13A-211ENST00000484581 MSANTD3Q96H12 275 aa3.3□□□□□ -1.88
VPS13A-211ENST00000484581 OR5B12Q96R08 314 aa3.3□□□□□ -1.88
VPS13A-211ENST00000484581 NXF3Q9H4D5 531 aaKnown RBP3.3□□□□□ -1.88
VPS13A-211ENST00000484581 CLN6Q9NWW5 311 aa3.3□□□□□ -1.88
VPS13A-211ENST00000484581 VSIG4Q9Y279 399 aa3.3□□□□□ -1.88
VPS13A-211ENST00000484581 RCL1Q9Y2P8 373 aaKnown RBP3.3□□□□□ -1.88
VPS13A-211ENST00000484581 YARS2Q9Y2Z4 477 aaKnown RBP3.3□□□□□ -1.88
VPS13A-211ENST00000484581 THSD7BQ9C0I4 1608 aa3.3□□□□□ -1.88
VPS13A-211ENST00000484581 COL2A1P02458 1487 aaPredicted RBP3.29□□□□□ -1.88
VPS13A-211ENST00000484581 TRAV39A0A0B4J263 110 aa3.29□□□□□ -1.88
VPS13A-211ENST00000484581 IGKV1D-13A0A0B4J2D9 117 aa3.29□□□□□ -1.88
VPS13A-211ENST00000484581 A0A0G2JLM5 398 aa3.29□□□□□ -1.88
VPS13A-211ENST00000484581 GSTTP1A0A1W2PQM5 241 aa3.29□□□□□ -1.88
VPS13A-211ENST00000484581 PSMD11O00231 422 aa3.29□□□□□ -1.88
VPS13A-211ENST00000484581 ICOSLGO75144 302 aa3.29□□□□□ -1.88
VPS13A-211ENST00000484581 FKBP6O75344 327 aa3.29□□□□□ -1.88
VPS13A-211ENST00000484581 AQP8O94778 261 aa3.29□□□□□ -1.88
VPS13A-211ENST00000484581 GKN3PP0CG01 181 aa3.29□□□□□ -1.88
VPS13A-211ENST00000484581 IGKV1-13P0DP09 117 aa3.29□□□□□ -1.88
VPS13A-211ENST00000484581 ICAM2P13598 275 aa3.29□□□□□ -1.88
VPS13A-211ENST00000484581 ZNF250P15622 560 aa3.29□□□□□ -1.88
VPS13A-211ENST00000484581 PMCHP20382 165 aa3.29□□□□□ -1.88
VPS13A-211ENST00000484581 CFHR2P36980 270 aa3.29□□□□□ -1.88
VPS13A-211ENST00000484581 NBL1P41271 181 aa3.29□□□□□ -1.88
VPS13A-211ENST00000484581 CCR8P51685 355 aa3.29□□□□□ -1.88
VPS13A-211ENST00000484581 APOC4P55056 127 aa3.29□□□□□ -1.88
VPS13A-211ENST00000484581 DMTNQ08495 405 aa3.29□□□□□ -1.88
VPS13A-211ENST00000484581 ZNF726P1Q15940 193 aa3.29□□□□□ -1.88
VPS13A-211ENST00000484581 KCTD19Q17RG1 926 aaPredicted RBP3.29□□□□□ -1.88
VPS13A-211ENST00000484581 MBOAT1Q6ZNC8 495 aa3.29□□□□□ -1.88
VPS13A-211ENST00000484581 TMEM150AQ86TG1 271 aa3.29□□□□□ -1.88
VPS13A-211ENST00000484581 GTSCR1Q86UQ5 136 aa3.29□□□□□ -1.88
VPS13A-211ENST00000484581 MYOCDQ8IZQ8 938 aa3.29□□□□□ -1.88
VPS13A-211ENST00000484581 ASCC1Q8N9N2 400 aaKnown RBP3.29□□□□□ -1.88
VPS13A-211ENST00000484581 FBXO36Q8NEA4 188 aa3.29□□□□□ -1.88
VPS13A-211ENST00000484581 OR51L1Q8NGJ5 315 aa3.29□□□□□ -1.88
VPS13A-211ENST00000484581 ZNF596Q8TC21 504 aa3.29□□□□□ -1.88
VPS13A-211ENST00000484581 FANK1Q8TC84 345 aa3.29□□□□□ -1.88
VPS13A-211ENST00000484581 CA5BP1Q8WTZ4 195 aa3.29□□□□□ -1.88
VPS13A-211ENST00000484581 FAM222BQ8WU58 562 aa3.29□□□□□ -1.88
VPS13A-211ENST00000484581 UCN3Q969E3 161 aa3.29□□□□□ -1.88
VPS13A-211ENST00000484581 DNAJC1Q96KC8 554 aaKnown RBP3.29□□□□□ -1.88
VPS13A-211ENST00000484581 FOXN4Q96NZ1 517 aa3.29□□□□□ -1.88
VPS13A-211ENST00000484581 P2RX4Q99571 388 aa3.29□□□□□ -1.88
VPS13A-211ENST00000484581 DEFB129Q9H1M3 183 aa3.29□□□□□ -1.88
VPS13A-211ENST00000484581 TMEM38AQ9H6F2 299 aa3.29□□□□□ -1.88
VPS13A-211ENST00000484581 PRSS16Q9NQE7 514 aa3.29□□□□□ -1.88
VPS13A-211ENST00000484581 AGPAT4Q9NRZ5 378 aa3.29□□□□□ -1.88
VPS13A-211ENST00000484581 IFNKQ9P0W0 207 aa3.29□□□□□ -1.88
VPS13A-211ENST00000484581 NEUROG3Q9Y4Z2 214 aa3.29□□□□□ -1.88
VPS13A-211ENST00000484581 ABCA7Q8IZY2 2146 aa3.29□□□□□ -1.88
VPS13A-211ENST00000484581 COL22A1Q8NFW1 1626 aaPredicted RBP3.29□□□□□ -1.88
VPS13A-211ENST00000484581 A0A0J9YXY3 114 aa3.28□□□□□ -1.88
VPS13A-211ENST00000484581 KLF18A0A0U1RQI7 1052 aa3.28□□□□□ -1.88
VPS13A-211ENST00000484581 A0A1B0GVI7 797 aa3.28□□□□□ -1.88
VPS13A-211ENST00000484581 A0A1B0GW55 424 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms