RNA–Protein interactions for RNA: ENST00000483684.1

COMMD3-213, Transcript of COMM domain containing 3, humanhuman

TSL 5

Gene COMMD3, Length 722 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-213ENST00000483684 APTXQ7Z2E3 356 aaKnown RBP2.5□□□□□ -2.01
COMMD3-213ENST00000483684 LUZP2Q86TE4 346 aa2.5□□□□□ -2.01
COMMD3-213ENST00000483684 LINC00523Q86TU6 105 aa2.5□□□□□ -2.01
COMMD3-213ENST00000483684 SLC51BQ86UW2 128 aa2.5□□□□□ -2.01
COMMD3-213ENST00000483684 VRK2Q86Y07 508 aa2.5□□□□□ -2.01
COMMD3-213ENST00000483684 CCDC50Q8IVM0 306 aa2.5□□□□□ -2.01
COMMD3-213ENST00000483684 KIR3DL3Q8N743 410 aa2.5□□□□□ -2.01
COMMD3-213ENST00000483684 CEP112Q8N8E3 955 aa2.5□□□□□ -2.01
COMMD3-213ENST00000483684 FNDC5Q8NAU1 212 aa2.5□□□□□ -2.01
COMMD3-213ENST00000483684 OR52I1Q8NGK6 324 aa2.5□□□□□ -2.01
COMMD3-213ENST00000483684 ZNF461Q8TAF7 563 aa2.5□□□□□ -2.01
COMMD3-213ENST00000483684 NDNFQ8TB73 568 aa2.5□□□□□ -2.01
COMMD3-213ENST00000483684 MARCH1Q8TCQ1 289 aa2.5□□□□□ -2.01
COMMD3-213ENST00000483684 CD300LFQ8TDQ1 290 aa2.5□□□□□ -2.01
COMMD3-213ENST00000483684 IFT81Q8WYA0 676 aa2.5□□□□□ -2.01
COMMD3-213ENST00000483684 RAB1CQ92928 201 aa2.5□□□□□ -2.01
COMMD3-213ENST00000483684 UBE2E3Q969T4 207 aa2.5□□□□□ -2.01
COMMD3-213ENST00000483684 STARD4Q96DR4 205 aa2.5□□□□□ -2.01
COMMD3-213ENST00000483684 TMA16Q96EY4 203 aaKnown RBP2.5□□□□□ -2.01
COMMD3-213ENST00000483684 TBX15Q96SF7 602 aa2.5□□□□□ -2.01
COMMD3-213ENST00000483684 ACBD6Q9BR61 282 aa2.5□□□□□ -2.01
COMMD3-213ENST00000483684 SLC35A5Q9BS91 424 aa2.5□□□□□ -2.01
COMMD3-213ENST00000483684 SMYD3Q9H7B4 428 aa2.5□□□□□ -2.01
COMMD3-213ENST00000483684 TRIM45Q9H8W5 580 aaPredicted RBP2.5□□□□□ -2.01
COMMD3-213ENST00000483684 ZDHHC11Q9H8X9 412 aa2.5□□□□□ -2.01
COMMD3-213ENST00000483684 PATZ1Q9HBE1 687 aaKnown RBP2.5□□□□□ -2.01
COMMD3-213ENST00000483684 POPDC2Q9HBU9 364 aa2.5□□□□□ -2.01
COMMD3-213ENST00000483684 MRM3Q9HC36 420 aaKnown RBP2.5□□□□□ -2.01
COMMD3-213ENST00000483684 SH2D2AQ9NP31 389 aa2.5□□□□□ -2.01
COMMD3-213ENST00000483684 MMP26Q9NRE1 261 aa2.5□□□□□ -2.01
COMMD3-213ENST00000483684 PAQR5Q9NXK6 330 aaPredicted RBP2.5□□□□□ -2.01
COMMD3-213ENST00000483684 B3GNT2Q9NY97 397 aa2.5□□□□□ -2.01
COMMD3-213ENST00000483684 NKIRAS1Q9NYS0 192 aa2.5□□□□□ -2.01
COMMD3-213ENST00000483684 PTTG3PQ9NZH4 202 aa2.5□□□□□ -2.01
COMMD3-213ENST00000483684 PSMC3IPQ9P2W1 217 aaPredicted RBP2.5□□□□□ -2.01
COMMD3-213ENST00000483684 GGA2Q9UJY4 613 aa2.5□□□□□ -2.01
COMMD3-213ENST00000483684 TMCO1Q9UM00 188 aa2.5□□□□□ -2.01
COMMD3-213ENST00000483684 PRPF19Q9UMS4 504 aaKnown RBP2.5□□□□□ -2.01
COMMD3-213ENST00000483684 TIMM22Q9Y584 194 aa2.5□□□□□ -2.01
COMMD3-213ENST00000483684 WSB1Q9Y6I7 421 aa2.5□□□□□ -2.01
COMMD3-213ENST00000483684 PTPRGP23470 1445 aa2.5□□□□□ -2.01
COMMD3-213ENST00000483684 CCDC180Q9P1Z9 1646 aa2.5□□□□□ -2.01
COMMD3-213ENST00000483684 PEG3Q9GZU2 1588 aa2.49□□□□□ -2.01
COMMD3-213ENST00000483684 A0A1W2PPV4 95 aa2.49□□□□□ -2.01
COMMD3-213ENST00000483684 PSMB11A5LHX3 300 aa2.49□□□□□ -2.01
COMMD3-213ENST00000483684 CENPBD1B2RD01 187 aa2.49□□□□□ -2.01
COMMD3-213ENST00000483684 FCN1O00602 326 aa2.49□□□□□ -2.01
COMMD3-213ENST00000483684 AIM2O14862 343 aa2.49□□□□□ -2.01
COMMD3-213ENST00000483684 SCAMP2O15127 329 aaKnown RBP2.49□□□□□ -2.01
COMMD3-213ENST00000483684 POLR1CO15160 346 aaPredicted RBP2.49□□□□□ -2.01
COMMD3-213ENST00000483684 DENRO43583 198 aaKnown RBP2.49□□□□□ -2.01
COMMD3-213ENST00000483684 GATCO43716 136 aaKnown RBP2.49□□□□□ -2.01
COMMD3-213ENST00000483684 CXCL13O43927 109 aa2.49□□□□□ -2.01
COMMD3-213ENST00000483684 N4BP1O75113 896 aaKnown RBP2.49□□□□□ -2.01
COMMD3-213ENST00000483684 NPIPB7O75200 414 aa2.49□□□□□ -2.01
COMMD3-213ENST00000483684 CDK14O94921 469 aa2.49□□□□□ -2.01
COMMD3-213ENST00000483684 DIRAS1O95057 198 aa2.49□□□□□ -2.01
COMMD3-213ENST00000483684 IL6P05231 212 aa2.49□□□□□ -2.01
COMMD3-213ENST00000483684 SERPINE2P07093 398 aa2.49□□□□□ -2.01
COMMD3-213ENST00000483684 PLEKP08567 350 aaPredicted RBP2.49□□□□□ -2.01
COMMD3-213ENST00000483684 PNMA6AP0CW24 399 aaPredicted RBP2.49□□□□□ -2.01
COMMD3-213ENST00000483684 HSMCR30P0CW71 290 aa2.49□□□□□ -2.01
COMMD3-213ENST00000483684 EIF2S2P20042 333 aaKnown RBP2.49□□□□□ -2.01
COMMD3-213ENST00000483684 RAB4AP20338 218 aa2.49□□□□□ -2.01
COMMD3-213ENST00000483684 SERPINA2P20848 420 aa2.49□□□□□ -2.01
COMMD3-213ENST00000483684 MSR1P21757 451 aa2.49□□□□□ -2.01
COMMD3-213ENST00000483684 CRABP2P29373 138 aa2.49□□□□□ -2.01
COMMD3-213ENST00000483684 PRDX3P30048 256 aaKnown RBP2.49□□□□□ -2.01
COMMD3-213ENST00000483684 NUDT1P36639 197 aa2.49□□□□□ -2.01
COMMD3-213ENST00000483684 VHLP40337 213 aa2.49□□□□□ -2.01
COMMD3-213ENST00000483684 PTGDSP41222 190 aa2.49□□□□□ -2.01
COMMD3-213ENST00000483684 HSPA2P54652 639 aa2.49□□□□□ -2.01
COMMD3-213ENST00000483684 CLDN18P56856 261 aa2.49□□□□□ -2.01
COMMD3-213ENST00000483684 RGS8P57771 180 aaPredicted RBP2.49□□□□□ -2.01
COMMD3-213ENST00000483684 LINC00315P59091 139 aa2.49□□□□□ -2.01
COMMD3-213ENST00000483684 RAB4BP61018 213 aa2.49□□□□□ -2.01
COMMD3-213ENST00000483684 IFFO1Q0D2I5 559 aa2.49□□□□□ -2.01
COMMD3-213ENST00000483684 FADDQ13158 208 aa2.49□□□□□ -2.01
COMMD3-213ENST00000483684 GPR176Q14439 515 aa2.49□□□□□ -2.01
COMMD3-213ENST00000483684 TGFBIQ15582 683 aa2.49□□□□□ -2.01
COMMD3-213ENST00000483684 ALX1Q15699 326 aa2.49□□□□□ -2.01
COMMD3-213ENST00000483684 NDUFA9Q16795 377 aa2.49□□□□□ -2.01
COMMD3-213ENST00000483684 DGUOKQ16854 277 aa2.49□□□□□ -2.01
COMMD3-213ENST00000483684 KLHL38Q2WGJ6 581 aa2.49□□□□□ -2.01
COMMD3-213ENST00000483684 HSDL1Q3SXM5 330 aa2.49□□□□□ -2.01
COMMD3-213ENST00000483684 MLIPQ5VWP3 458 aa2.49□□□□□ -2.01
COMMD3-213ENST00000483684 PLCXD3Q63HM9 321 aa2.49□□□□□ -2.01
COMMD3-213ENST00000483684 SPECC1LQ69YQ0 1117 aa2.49□□□□□ -2.01
COMMD3-213ENST00000483684 FAM199XQ6PEV8 388 aaPredicted RBP2.49□□□□□ -2.01
COMMD3-213ENST00000483684 COPS6Q7L5N1 327 aa2.49□□□□□ -2.01
COMMD3-213ENST00000483684 LRRC6Q86X45 466 aa2.49□□□□□ -2.01
COMMD3-213ENST00000483684 SELENOHQ8IZQ5 122 aaKnown RBP2.49□□□□□ -2.01
COMMD3-213ENST00000483684 LIX1Q8N485 282 aa2.49□□□□□ -2.01
COMMD3-213ENST00000483684 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.49□□□□□ -2.01
COMMD3-213ENST00000483684 ZNF740Q8NDX6 193 aa2.49□□□□□ -2.01
COMMD3-213ENST00000483684 OR4F6Q8NGB9 312 aa2.49□□□□□ -2.01
COMMD3-213ENST00000483684 OR4A15Q8NGL6 344 aa2.49□□□□□ -2.01
COMMD3-213ENST00000483684 ANGPTL6Q8NI99 470 aa2.49□□□□□ -2.01
COMMD3-213ENST00000483684 PHOSPHO2Q8TCD6 241 aa2.49□□□□□ -2.01
COMMD3-213ENST00000483684 CYP2S1Q96SQ9 504 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms