RNA–Protein interactions for RNA: ENST00000483407.1

CSDE1-207, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-207ENST00000483407 GLRXP35754 106 aa5.04□□□□□ -1.6
CSDE1-207ENST00000483407 TMEM33P57088 247 aa5.04□□□□□ -1.6
CSDE1-207ENST00000483407 SELENOVP59797 346 aa5.04□□□□□ -1.6
CSDE1-207ENST00000483407 GALK2Q01415 458 aa5.04□□□□□ -1.6
CSDE1-207ENST00000483407 STX3Q13277 289 aa5.04□□□□□ -1.6
CSDE1-207ENST00000483407 MFSD13AQ14CX5 517 aa5.04□□□□□ -1.6
CSDE1-207ENST00000483407 GSG1Q2KHT4 349 aa5.04□□□□□ -1.6
CSDE1-207ENST00000483407 PDCD4Q53EL6 469 aaKnown RBP5.04□□□□□ -1.6
CSDE1-207ENST00000483407 ZNF311Q5JNZ3 666 aa5.04□□□□□ -1.6
CSDE1-207ENST00000483407 FAM69AQ5T7M9 428 aa5.04□□□□□ -1.6
CSDE1-207ENST00000483407 GKAP1Q5VSY0 366 aaPredicted RBP5.04□□□□□ -1.6
CSDE1-207ENST00000483407 DEF8Q6ZN54 512 aa5.04□□□□□ -1.6
CSDE1-207ENST00000483407 H1FNTQ75WM6 255 aaPredicted RBP5.04□□□□□ -1.6
CSDE1-207ENST00000483407 NET1Q7Z628 596 aaPredicted RBP5.04□□□□□ -1.6
CSDE1-207ENST00000483407 SERPINA11Q86U17 422 aa5.04□□□□□ -1.6
CSDE1-207ENST00000483407 MDP1Q86V88 176 aa5.04□□□□□ -1.6
CSDE1-207ENST00000483407 MYPOPQ86VE0 399 aaPredicted RBP5.04□□□□□ -1.6
CSDE1-207ENST00000483407 UEVLDQ8IX04 471 aa5.04□□□□□ -1.6
CSDE1-207ENST00000483407 CLIP4Q8N3C7 705 aa5.04□□□□□ -1.6
CSDE1-207ENST00000483407 C3orf56Q8N813 242 aa5.04□□□□□ -1.6
CSDE1-207ENST00000483407 OR51F2Q8NH61 342 aa5.04□□□□□ -1.6
CSDE1-207ENST00000483407 SGMS2Q8NHU3 365 aa5.04□□□□□ -1.6
CSDE1-207ENST00000483407 SLC38A5Q8WUX1 472 aa5.04□□□□□ -1.6
CSDE1-207ENST00000483407 RDH5Q92781 318 aa5.04□□□□□ -1.6
CSDE1-207ENST00000483407 SLC38A4Q969I6 547 aa5.04□□□□□ -1.6
CSDE1-207ENST00000483407 SLC35B4Q969S0 331 aa5.04□□□□□ -1.6
CSDE1-207ENST00000483407 MUL1Q969V5 352 aa5.04□□□□□ -1.6
CSDE1-207ENST00000483407 MRPL24Q96A35 216 aaKnown RBP5.04□□□□□ -1.6
CSDE1-207ENST00000483407 TMEM186Q96B77 213 aa5.04□□□□□ -1.6
CSDE1-207ENST00000483407 KTI12Q96EK9 354 aaPredicted RBP5.04□□□□□ -1.6
CSDE1-207ENST00000483407 TMEM19Q96HH6 336 aa5.04□□□□□ -1.6
CSDE1-207ENST00000483407 TEX37Q96LM6 180 aa5.04□□□□□ -1.6
CSDE1-207ENST00000483407 MOGAT1Q96PD6 335 aa5.04□□□□□ -1.6
CSDE1-207ENST00000483407 SORT1Q99523 831 aa5.04□□□□□ -1.6
CSDE1-207ENST00000483407 ZNF416Q9BWM5 594 aa5.04□□□□□ -1.6
CSDE1-207ENST00000483407 NARFLQ9H6Q4 476 aa5.04□□□□□ -1.6
CSDE1-207ENST00000483407 RMND5AQ9H871 391 aa5.04□□□□□ -1.6
CSDE1-207ENST00000483407 TPT1P8Q9HAU6 139 aa5.04□□□□□ -1.6
CSDE1-207ENST00000483407 C12orf10Q9HB07 376 aa5.04□□□□□ -1.6
CSDE1-207ENST00000483407 TBC1D23Q9NUY8 699 aa5.04□□□□□ -1.6
CSDE1-207ENST00000483407 HIF1ANQ9NWT6 349 aa5.04□□□□□ -1.6
CSDE1-207ENST00000483407 ETAA1Q9NY74 926 aa5.04□□□□□ -1.6
CSDE1-207ENST00000483407 SELENONQ9NZV5 590 aa5.04□□□□□ -1.6
CSDE1-207ENST00000483407 HAO1Q9UJM8 370 aa5.04□□□□□ -1.6
CSDE1-207ENST00000483407 FBXL3Q9UKT7 428 aa5.04□□□□□ -1.6
CSDE1-207ENST00000483407 ZNF346Q9UL40 294 aaKnown RBP5.04□□□□□ -1.6
CSDE1-207ENST00000483407 POFUT2Q9Y2G5 429 aa5.04□□□□□ -1.6
CSDE1-207ENST00000483407 TRAV36DV7A0A075B6V5 113 aa5.03□□□□□ -1.6
CSDE1-207ENST00000483407 LOC102723971A0A1B0GUV8 181 aa5.03□□□□□ -1.6
CSDE1-207ENST00000483407 LOC102725191A0A1B0GVB3 256 aa5.03□□□□□ -1.6
CSDE1-207ENST00000483407 A0A1W2PPW3 197 aa5.03□□□□□ -1.6
CSDE1-207ENST00000483407 TRPC5OSA6NMA1 111 aa5.03□□□□□ -1.6
CSDE1-207ENST00000483407 ZNF726A6NNF4 738 aa5.03□□□□□ -1.6
CSDE1-207ENST00000483407 C5orf58C9J3I9 102 aa5.03□□□□□ -1.6
CSDE1-207ENST00000483407 SDHDO14521 159 aa5.03□□□□□ -1.6
CSDE1-207ENST00000483407 RGS16O15492 202 aaPredicted RBP5.03□□□□□ -1.6
CSDE1-207ENST00000483407 PPIHO43447 177 aaKnown RBP5.03□□□□□ -1.6
CSDE1-207ENST00000483407 TRAF3IP2O43734 574 aaPredicted RBP5.03□□□□□ -1.6
CSDE1-207ENST00000483407 ENTPD5O75356 428 aa5.03□□□□□ -1.6
CSDE1-207ENST00000483407 SLC22A3O75751 556 aa5.03□□□□□ -1.6
CSDE1-207ENST00000483407 SEC14L2O76054 403 aa5.03□□□□□ -1.6
CSDE1-207ENST00000483407 UBL3O95164 117 aa5.03□□□□□ -1.6
CSDE1-207ENST00000483407 VENTXO95231 258 aa5.03□□□□□ -1.6
CSDE1-207ENST00000483407 HLA-HP01893 362 aa5.03□□□□□ -1.6
CSDE1-207ENST00000483407 IGFBP1P08833 259 aaPredicted RBP5.03□□□□□ -1.6
CSDE1-207ENST00000483407 ALDOCP09972 364 aaKnown RBP5.03□□□□□ -1.6
CSDE1-207ENST00000483407 ZCCHC18P0CG32 403 aa5.03□□□□□ -1.6
CSDE1-207ENST00000483407 IDO1P14902 403 aa5.03□□□□□ -1.6
CSDE1-207ENST00000483407 TCN1P20061 433 aaPredicted RBP5.03□□□□□ -1.6
CSDE1-207ENST00000483407 BGNP21810 368 aa5.03□□□□□ -1.6
CSDE1-207ENST00000483407 IL12AP29459 219 aa5.03□□□□□ -1.6
CSDE1-207ENST00000483407 GRPRP30550 384 aa5.03□□□□□ -1.6
CSDE1-207ENST00000483407 MSX2P35548 267 aaPredicted RBP5.03□□□□□ -1.6
CSDE1-207ENST00000483407 ALDH3B1P43353 468 aa5.03□□□□□ -1.6
CSDE1-207ENST00000483407 PTDSS1P48651 473 aaKnown RBP5.03□□□□□ -1.6
CSDE1-207ENST00000483407 COMPP49747 757 aaPredicted RBP5.03□□□□□ -1.6
CSDE1-207ENST00000483407 NCALDP61601 193 aa5.03□□□□□ -1.6
CSDE1-207ENST00000483407 MRPS11P82912 194 aaKnown RBP5.03□□□□□ -1.6
CSDE1-207ENST00000483407 HOXC5Q00444 222 aa5.03□□□□□ -1.6
CSDE1-207ENST00000483407 EGR4Q05215 589 aa5.03□□□□□ -1.6
CSDE1-207ENST00000483407 MAPK11Q15759 364 aa5.03□□□□□ -1.6
CSDE1-207ENST00000483407 KRT71Q3SY84 523 aa5.03□□□□□ -1.6
CSDE1-207ENST00000483407 ALG10BQ5I7T1 473 aa5.03□□□□□ -1.6
CSDE1-207ENST00000483407 ELFN2Q5R3F8 820 aa5.03□□□□□ -1.6
CSDE1-207ENST00000483407 C6orf10Q5SRN2 563 aa5.03□□□□□ -1.6
CSDE1-207ENST00000483407 CARD17Q5XLA6 110 aa5.03□□□□□ -1.6
CSDE1-207ENST00000483407 C6orf89Q6UWU4 347 aa5.03□□□□□ -1.6
CSDE1-207ENST00000483407 ZNF813Q6ZN06 617 aa5.03□□□□□ -1.6
CSDE1-207ENST00000483407 MSANTD1Q6ZTZ1 278 aa5.03□□□□□ -1.6
CSDE1-207ENST00000483407 USP43Q70EL4 1123 aa5.03□□□□□ -1.6
CSDE1-207ENST00000483407 C20orf196Q8IYI0 205 aa5.03□□□□□ -1.6
CSDE1-207ENST00000483407 TMEM123Q8N131 208 aa5.03□□□□□ -1.6
CSDE1-207ENST00000483407 SYT8Q8NBV8 401 aa5.03□□□□□ -1.6
CSDE1-207ENST00000483407 ADPRHL1Q8NDY3 354 aa5.03□□□□□ -1.6
CSDE1-207ENST00000483407 SEMA6DQ8NFY4 1073 aa5.03□□□□□ -1.6
CSDE1-207ENST00000483407 OR6N1Q8NGY5 312 aa5.03□□□□□ -1.6
CSDE1-207ENST00000483407 CLDND2Q8NHS1 167 aa5.03□□□□□ -1.6
CSDE1-207ENST00000483407 BBS10Q8TAM1 723 aa5.03□□□□□ -1.6
CSDE1-207ENST00000483407 FAM216AQ8WUB2 273 aa5.03□□□□□ -1.6
CSDE1-207ENST00000483407 DNAJA4Q8WW22 397 aaPredicted RBP5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms