RNA–Protein interactions for RNA: ENST00000483212.1

USP4-210, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 2

Gene USP4, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-210ENST00000483212 SLCO5A1Q9H2Y9 848 aa7.28□□□□□ -1.24
USP4-210ENST00000483212 WDR76Q9H967 626 aa7.28□□□□□ -1.24
USP4-210ENST00000483212 ACOT13Q9NPJ3 140 aa7.28□□□□□ -1.24
USP4-210ENST00000483212 GLRX2Q9NS18 164 aa7.28□□□□□ -1.24
USP4-210ENST00000483212 CLEC2DQ9UHP7 191 aa7.28□□□□□ -1.24
USP4-210ENST00000483212 SCOCQ9UIL1 159 aa7.28□□□□□ -1.24
USP4-210ENST00000483212 COPS3Q9UNS2 423 aa7.28□□□□□ -1.24
USP4-210ENST00000483212 KLHDC2Q9Y2U9 406 aa7.28□□□□□ -1.24
USP4-210ENST00000483212 NOSIPQ9Y314 301 aaKnown RBP7.28□□□□□ -1.24
USP4-210ENST00000483212 TPRP12270 2363 aaKnown RBP7.28□□□□□ -1.24
USP4-210ENST00000483212 A0A1W2PQL4 384 aaPredicted RBP7.27□□□□□ -1.25
USP4-210ENST00000483212 TMEM129A0AVI4 362 aa7.27□□□□□ -1.25
USP4-210ENST00000483212 C12orf71A8MTZ7 269 aa7.27□□□□□ -1.25
USP4-210ENST00000483212 RPL36A-HNRNPH2H7BZ11 118 aa7.27□□□□□ -1.25
USP4-210ENST00000483212 SLC19A2O60779 497 aa7.27□□□□□ -1.25
USP4-210ENST00000483212 MRPL33O75394 65 aaKnown RBP7.27□□□□□ -1.25
USP4-210ENST00000483212 TNFSF13O75888 250 aa7.27□□□□□ -1.25
USP4-210ENST00000483212 CLPTM1O96005 669 aa7.27□□□□□ -1.25
USP4-210ENST00000483212 HRGP04196 525 aa7.27□□□□□ -1.25
USP4-210ENST00000483212 LCKP06239 509 aa7.27□□□□□ -1.25
USP4-210ENST00000483212 NR2C1P13056 603 aa7.27□□□□□ -1.25
USP4-210ENST00000483212 LAP3P28838 519 aa7.27□□□□□ -1.25
USP4-210ENST00000483212 CEACAM8P31997 349 aaPredicted RBP7.27□□□□□ -1.25
USP4-210ENST00000483212 NAA10P41227 235 aaPredicted RBP7.27□□□□□ -1.25
USP4-210ENST00000483212 KIR2DL2P43627 348 aaPredicted RBP7.27□□□□□ -1.25
USP4-210ENST00000483212 BLVRAP53004 296 aa7.27□□□□□ -1.25
USP4-210ENST00000483212 HCCSP53701 268 aa7.27□□□□□ -1.25
USP4-210ENST00000483212 HSF2Q03933 536 aa7.27□□□□□ -1.25
USP4-210ENST00000483212 GLO1Q04760 184 aa7.27□□□□□ -1.25
USP4-210ENST00000483212 FOXF2Q12947 444 aa7.27□□□□□ -1.25
USP4-210ENST00000483212 STK11Q15831 433 aa7.27□□□□□ -1.25
USP4-210ENST00000483212 TEX30Q5JUR7 227 aa7.27□□□□□ -1.25
USP4-210ENST00000483212 ZNF684Q5T5D7 378 aa7.27□□□□□ -1.25
USP4-210ENST00000483212 UBE2UQ5VVX9 321 aa7.27□□□□□ -1.25
USP4-210ENST00000483212 OTPQ5XKR4 325 aa7.27□□□□□ -1.25
USP4-210ENST00000483212 GFRALQ6UXV0 394 aa7.27□□□□□ -1.25
USP4-210ENST00000483212 P4HA3Q7Z4N8 544 aa7.27□□□□□ -1.25
USP4-210ENST00000483212 GLB1L2Q8IW92 636 aa7.27□□□□□ -1.25
USP4-210ENST00000483212 SLC35F2Q8IXU6 374 aa7.27□□□□□ -1.25
USP4-210ENST00000483212 NANOGP1Q8N7R0 232 aa7.27□□□□□ -1.25
USP4-210ENST00000483212 NAXEQ8NCW5 288 aa7.27□□□□□ -1.25
USP4-210ENST00000483212 OR6N1Q8NGY5 312 aa7.27□□□□□ -1.25
USP4-210ENST00000483212 C11orf40Q8WZ69 217 aa7.27□□□□□ -1.25
USP4-210ENST00000483212 NSMAFQ92636 917 aa7.27□□□□□ -1.25
USP4-210ENST00000483212 MUL1Q969V5 352 aa7.27□□□□□ -1.25
USP4-210ENST00000483212 ALKBH3Q96Q83 286 aaPredicted RBP7.27□□□□□ -1.25
USP4-210ENST00000483212 INTS14Q96SY0 518 aa7.27□□□□□ -1.25
USP4-210ENST00000483212 ULBP2Q9BZM5 246 aa7.27□□□□□ -1.25
USP4-210ENST00000483212 YIPF3Q9GZM5 350 aa7.27□□□□□ -1.25
USP4-210ENST00000483212 CCDC90BQ9GZT6 254 aa7.27□□□□□ -1.25
USP4-210ENST00000483212 RERGLQ9H628 205 aa7.27□□□□□ -1.25
USP4-210ENST00000483212 GPR35Q9HC97 309 aa7.27□□□□□ -1.25
USP4-210ENST00000483212 POLE4Q9NR33 117 aa7.27□□□□□ -1.25
USP4-210ENST00000483212 INPP5EQ9NRR6 644 aa7.27□□□□□ -1.25
USP4-210ENST00000483212 SLC7A10Q9NS82 523 aa7.27□□□□□ -1.25
USP4-210ENST00000483212 PARPBPQ9NWS1 579 aa7.27□□□□□ -1.25
USP4-210ENST00000483212 ERVK13-1Q9NX77 482 aa7.27□□□□□ -1.25
USP4-210ENST00000483212 PRSS50Q9UI38 385 aa7.27□□□□□ -1.25
USP4-210ENST00000483212 EXOSC1Q9Y3B2 195 aaKnown RBP7.27□□□□□ -1.25
USP4-210ENST00000483212 ALPK2Q86TB3 2170 aa7.27□□□□□ -1.25
USP4-210ENST00000483212 OR6C65A6NJZ3 312 aa7.26□□□□□ -1.25
USP4-210ENST00000483212 FIGNL2A6NMB9 653 aa7.26□□□□□ -1.25
USP4-210ENST00000483212 TTLL8A6PVC2 850 aa7.26□□□□□ -1.25
USP4-210ENST00000483212 INMTO95050 263 aa7.26□□□□□ -1.25
USP4-210ENST00000483212 WNT11O96014 354 aa7.26□□□□□ -1.25
USP4-210ENST00000483212 CGAP01215 116 aa7.26□□□□□ -1.25
USP4-210ENST00000483212 HOXD4P09016 255 aaPredicted RBP7.26□□□□□ -1.25
USP4-210ENST00000483212 OR2T7P0C7T2 308 aa7.26□□□□□ -1.25
USP4-210ENST00000483212 GLI4P10075 376 aa7.26□□□□□ -1.25
USP4-210ENST00000483212 ABOP16442 354 aa7.26□□□□□ -1.25
USP4-210ENST00000483212 ALOX5APP20292 161 aa7.26□□□□□ -1.25
USP4-210ENST00000483212 CDAP32320 146 aa7.26□□□□□ -1.25
USP4-210ENST00000483212 TIMP3P35625 211 aa7.26□□□□□ -1.25
USP4-210ENST00000483212 RPS27P42677 84 aaKnown RBP7.26□□□□□ -1.25
USP4-210ENST00000483212 OR3A2P47893 321 aa7.26□□□□□ -1.25
USP4-210ENST00000483212 ENTPD1P49961 510 aa7.26□□□□□ -1.25
USP4-210ENST00000483212 NR1H2P55055 460 aa7.26□□□□□ -1.25
USP4-210ENST00000483212 GP2P55259 537 aaKnown RBP7.26□□□□□ -1.25
USP4-210ENST00000483212 FOXG1P55316 489 aaPredicted RBP7.26□□□□□ -1.25
USP4-210ENST00000483212 ACTC1P68032 377 aa7.26□□□□□ -1.25
USP4-210ENST00000483212 ACTA1P68133 377 aa7.26□□□□□ -1.25
USP4-210ENST00000483212 MRPS34P82930 218 aaKnown RBP7.26□□□□□ -1.25
USP4-210ENST00000483212 ROR2Q01974 943 aaKnown RBP7.26□□□□□ -1.25
USP4-210ENST00000483212 ENDOGQ14249 297 aaKnown RBP7.26□□□□□ -1.25
USP4-210ENST00000483212 GALEQ14376 348 aa7.26□□□□□ -1.25
USP4-210ENST00000483212 SF3B4Q15427 424 aaKnown RBP eCLIP7.26□□□□□ -1.25
USP4-210ENST00000483212 MEP1BQ16820 701 aa7.26□□□□□ -1.25
USP4-210ENST00000483212 CDONQ4KMG0 1287 aa7.26□□□□□ -1.25
USP4-210ENST00000483212 OR2G6Q5TZ20 316 aa7.26□□□□□ -1.25
USP4-210ENST00000483212 ZNF787Q6DD87 383 aa7.26□□□□□ -1.25
USP4-210ENST00000483212 OR2A2Q6IF42 318 aa7.26□□□□□ -1.25
USP4-210ENST00000483212 VWA1Q6PCB0 445 aa7.26□□□□□ -1.25
USP4-210ENST00000483212 TFAP2EQ6VUC0 442 aa7.26□□□□□ -1.25
USP4-210ENST00000483212 FAM214BQ7L5A3 538 aa7.26□□□□□ -1.25
USP4-210ENST00000483212 ZNF627Q7L945 461 aa7.26□□□□□ -1.25
USP4-210ENST00000483212 LHFPL3Q86UP9 236 aa7.26□□□□□ -1.25
USP4-210ENST00000483212 ERI1Q8IV48 349 aaKnown RBP7.26□□□□□ -1.25
USP4-210ENST00000483212 MCEMP1Q8IX19 187 aa7.26□□□□□ -1.25
USP4-210ENST00000483212 GCNT2Q8N0V5 402 aa7.26□□□□□ -1.25
USP4-210ENST00000483212 SVOPQ8N4V2 548 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms