RNA–Protein interactions for RNA: ENST00000483030.1

CSDE1-206, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-206ENST00000483030 IL13RA1P78552 427 aa6.25□□□□□ -1.41
CSDE1-206ENST00000483030 CDK6Q00534 326 aa6.25□□□□□ -1.41
CSDE1-206ENST00000483030 PLP2Q04941 152 aa6.25□□□□□ -1.41
CSDE1-206ENST00000483030 HNRNPA0Q13151 305 aaKnown RBP6.25□□□□□ -1.41
CSDE1-206ENST00000483030 MELKQ14680 651 aa6.25□□□□□ -1.41
CSDE1-206ENST00000483030 KRT71Q3SY84 523 aa6.25□□□□□ -1.41
CSDE1-206ENST00000483030 SPRNQ5BIV9 151 aa6.25□□□□□ -1.41
CSDE1-206ENST00000483030 KLF17Q5JT82 389 aaPredicted RBP6.25□□□□□ -1.41
CSDE1-206ENST00000483030 FAM209AQ5JX71 171 aa6.25□□□□□ -1.41
CSDE1-206ENST00000483030 SPATA46Q5T0L3 261 aa6.25□□□□□ -1.41
CSDE1-206ENST00000483030 THEM4Q5T1C6 240 aa6.25□□□□□ -1.41
CSDE1-206ENST00000483030 GCNT6Q5T4J0 391 aa6.25□□□□□ -1.41
CSDE1-206ENST00000483030 REEP3Q6NUK4 255 aa6.25□□□□□ -1.41
CSDE1-206ENST00000483030 SLC2A7Q6PXP3 512 aa6.25□□□□□ -1.41
CSDE1-206ENST00000483030 MSANTD1Q6ZTZ1 278 aa6.25□□□□□ -1.41
CSDE1-206ENST00000483030 DPPA2Q7Z7J5 298 aa6.25□□□□□ -1.41
CSDE1-206ENST00000483030 KRT73Q86Y46 540 aa6.25□□□□□ -1.41
CSDE1-206ENST00000483030 C10orf111Q8N326 155 aa6.25□□□□□ -1.41
CSDE1-206ENST00000483030 LRRC18Q8N456 261 aa6.25□□□□□ -1.41
CSDE1-206ENST00000483030 LRRC17Q8N6Y2 441 aa6.25□□□□□ -1.41
CSDE1-206ENST00000483030 RBM15BQ8NDT2 890 aaKnown RBP6.25□□□□□ -1.41
CSDE1-206ENST00000483030 CPEB3Q8NE35 698 aaKnown RBP6.25□□□□□ -1.41
CSDE1-206ENST00000483030 DEFB108BQ8NET1 73 aa6.25□□□□□ -1.41
CSDE1-206ENST00000483030 GTF2H4Q92759 462 aa6.25□□□□□ -1.41
CSDE1-206ENST00000483030 C1orf147Q96MC9 270 aaPredicted RBP6.25□□□□□ -1.41
CSDE1-206ENST00000483030 ZNF48Q96MX3 618 aaPredicted RBP6.25□□□□□ -1.41
CSDE1-206ENST00000483030 DCLRE1CQ96SD1 692 aaKnown RBP6.25□□□□□ -1.41
CSDE1-206ENST00000483030 TMEM43Q9BTV4 400 aa6.25□□□□□ -1.41
CSDE1-206ENST00000483030 SPATA5L1Q9BVQ7 753 aa6.25□□□□□ -1.41
CSDE1-206ENST00000483030 EGLN1Q9GZT9 426 aa6.25□□□□□ -1.41
CSDE1-206ENST00000483030 C1orf198Q9H425 327 aa6.25□□□□□ -1.41
CSDE1-206ENST00000483030 SSU72Q9NP77 194 aaKnown RBP6.25□□□□□ -1.41
CSDE1-206ENST00000483030 SDR39U1Q9NRG7 319 aaPredicted RBP6.25□□□□□ -1.41
CSDE1-206ENST00000483030 PLEK2Q9NYT0 353 aa6.25□□□□□ -1.41
CSDE1-206ENST00000483030 TAS2R5Q9NYW4 299 aa6.25□□□□□ -1.41
CSDE1-206ENST00000483030 TESQ9UGI8 421 aaKnown RBP6.25□□□□□ -1.41
CSDE1-206ENST00000483030 PURGQ9UJV8 347 aaKnown RBP6.25□□□□□ -1.41
CSDE1-206ENST00000483030 SLC13A4Q9UKG4 626 aa6.25□□□□□ -1.41
CSDE1-206ENST00000483030 AUP1Q9Y679 476 aa6.25□□□□□ -1.41
CSDE1-206ENST00000483030 PPIAL4EA0A075B759 164 aa6.24□□□□□ -1.41
CSDE1-206ENST00000483030 PPIAL4CA0A0B4J2A2 164 aa6.24□□□□□ -1.41
CSDE1-206ENST00000483030 A0A0G2JK05 382 aa6.24□□□□□ -1.41
CSDE1-206ENST00000483030 A0A1W2PRQ8 180 aa6.24□□□□□ -1.41
CSDE1-206ENST00000483030 PLSCR5A0PG75 271 aa6.24□□□□□ -1.41
CSDE1-206ENST00000483030 PRORSD1PA6NEY8 169 aa6.24□□□□□ -1.41
CSDE1-206ENST00000483030 ZSCAN5BA6NJL1 495 aa6.24□□□□□ -1.41
CSDE1-206ENST00000483030 PPIAL4DF5H284 164 aa6.24□□□□□ -1.41
CSDE1-206ENST00000483030 TRAPPC2LH3BP13 241 aa6.24□□□□□ -1.41
CSDE1-206ENST00000483030 UBDO15205 165 aa6.24□□□□□ -1.41
CSDE1-206ENST00000483030 CH25HO95992 272 aa6.24□□□□□ -1.41
CSDE1-206ENST00000483030 RNASE1P07998 156 aaKnown RBP6.24□□□□□ -1.41
CSDE1-206ENST00000483030 PGA4P0DJD7 388 aa6.24□□□□□ -1.41
CSDE1-206ENST00000483030 PGA3P0DJD8 388 aa6.24□□□□□ -1.41
CSDE1-206ENST00000483030 PPIAL4FP0DN26 164 aa6.24□□□□□ -1.41
CSDE1-206ENST00000483030 AQP1P29972 269 aa6.24□□□□□ -1.41
CSDE1-206ENST00000483030 APLNRP35414 380 aa6.24□□□□□ -1.41
CSDE1-206ENST00000483030 RBMXP38159 391 aaKnown RBP6.24□□□□□ -1.41
CSDE1-206ENST00000483030 MPV17P39210 176 aa6.24□□□□□ -1.41
CSDE1-206ENST00000483030 MMP15P51511 669 aa6.24□□□□□ -1.41
CSDE1-206ENST00000483030 HSF2Q03933 536 aa6.24□□□□□ -1.41
CSDE1-206ENST00000483030 SLC3A1Q07837 685 aa6.24□□□□□ -1.41
CSDE1-206ENST00000483030 ZNF154Q13106 437 aa6.24□□□□□ -1.41
CSDE1-206ENST00000483030 SLC9A3R2Q15599 337 aa6.24□□□□□ -1.41
CSDE1-206ENST00000483030 ZNF718Q3SXZ3 478 aa6.24□□□□□ -1.41
CSDE1-206ENST00000483030 ARMCX4Q5H9R4 360 aa6.24□□□□□ -1.41
CSDE1-206ENST00000483030 PABPC1L2AQ5JQF8 200 aa6.24□□□□□ -1.41
CSDE1-206ENST00000483030 TMEM255AQ5JRV8 349 aa6.24□□□□□ -1.41
CSDE1-206ENST00000483030 HHATQ5VTY9 493 aa6.24□□□□□ -1.41
CSDE1-206ENST00000483030 LEG1Q6P5S2 330 aa6.24□□□□□ -1.41
CSDE1-206ENST00000483030 LINC00114Q6XXX2 140 aa6.24□□□□□ -1.41
CSDE1-206ENST00000483030 ANKRD42Q8N9B4 389 aa6.24□□□□□ -1.41
CSDE1-206ENST00000483030 SYT14Q8NB59 555 aa6.24□□□□□ -1.41
CSDE1-206ENST00000483030 AENQ8WTP8 325 aaKnown RBP6.24□□□□□ -1.41
CSDE1-206ENST00000483030 GEMIN6Q8WXD5 167 aaKnown RBP6.24□□□□□ -1.41
CSDE1-206ENST00000483030 POP5Q969H6 163 aaKnown RBP6.24□□□□□ -1.41
CSDE1-206ENST00000483030 MCHR2Q969V1 340 aa6.24□□□□□ -1.41
CSDE1-206ENST00000483030 SLC25A28Q96A46 364 aa6.24□□□□□ -1.41
CSDE1-206ENST00000483030 MARS2Q96GW9 593 aaKnown RBP6.24□□□□□ -1.41
CSDE1-206ENST00000483030 OR52B2Q96RD2 323 aa6.24□□□□□ -1.41
CSDE1-206ENST00000483030 ZNF347Q96SE7 839 aa6.24□□□□□ -1.41
CSDE1-206ENST00000483030 MCHR1Q99705 422 aa6.24□□□□□ -1.41
CSDE1-206ENST00000483030 CENPHQ9H3R5 247 aa6.24□□□□□ -1.41
CSDE1-206ENST00000483030 ZMAT3Q9HA38 289 aaKnown RBP6.24□□□□□ -1.41
CSDE1-206ENST00000483030 NPHS2Q9NP85 383 aa6.24□□□□□ -1.41
CSDE1-206ENST00000483030 NANSQ9NR45 359 aa6.24□□□□□ -1.41
CSDE1-206ENST00000483030 THAP1Q9NVV9 213 aa6.24□□□□□ -1.41
CSDE1-206ENST00000483030 SLC25A37Q9NYZ2 338 aa6.24□□□□□ -1.41
CSDE1-206ENST00000483030 SLAMF8Q9P0V8 285 aa6.24□□□□□ -1.41
CSDE1-206ENST00000483030 EIF3KQ9UBQ5 218 aaKnown RBP6.24□□□□□ -1.41
CSDE1-206ENST00000483030 ZMAT5Q9UDW3 170 aaKnown RBP6.24□□□□□ -1.41
CSDE1-206ENST00000483030 SOX21Q9Y651 276 aaPredicted RBP6.24□□□□□ -1.41
CSDE1-206ENST00000483030 LOC100509620A0A075B734 347 aa6.23□□□□□ -1.41
CSDE1-206ENST00000483030 IGHV3OR16-10A0A075B7F0 116 aa6.23□□□□□ -1.41
CSDE1-206ENST00000483030 C5orf49A4QMS7 147 aa6.23□□□□□ -1.41
CSDE1-206ENST00000483030 BLOC1S5-TXNDC5H3BN57 136 aa6.23□□□□□ -1.41
CSDE1-206ENST00000483030 M0R3H8 397 aa6.23□□□□□ -1.41
CSDE1-206ENST00000483030 SERPINB7O75635 380 aa6.23□□□□□ -1.41
CSDE1-206ENST00000483030 GPANK1O95872 356 aa6.23□□□□□ -1.41
CSDE1-206ENST00000483030 IGHV2-70P01814 119 aa6.23□□□□□ -1.41
CSDE1-206ENST00000483030 IGHG1P01857 330 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms