RNA–Protein interactions for RNA: ENST00000482879.5

SDC1-206, Transcript of syndecan 1, humanhuman

TSL 4

Gene SDC1, Length 558 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-206ENST00000482879 ZNF582Q96NG8 517 aaPredicted RBP10.76□□□□□ -0.69
SDC1-206ENST00000482879 FOXB1Q99853 325 aa10.76□□□□□ -0.69
SDC1-206ENST00000482879 RACGAP1Q9H0H5 632 aa10.76□□□□□ -0.69
SDC1-206ENST00000482879 Q9H521 79 aa10.76□□□□□ -0.69
SDC1-206ENST00000482879 KCNJ16Q9NPI9 418 aa10.76□□□□□ -0.69
SDC1-206ENST00000482879 CLN6Q9NWW5 311 aa10.76□□□□□ -0.69
SDC1-206ENST00000482879 ELOVL5Q9NYP7 299 aa10.76□□□□□ -0.69
SDC1-206ENST00000482879 TAS2R16Q9NYV7 291 aa10.76□□□□□ -0.69
SDC1-206ENST00000482879 MOKQ9UQ07 419 aa10.76□□□□□ -0.69
SDC1-206ENST00000482879 UGT2A1Q9Y4X1 527 aa10.76□□□□□ -0.69
SDC1-206ENST00000482879 HSPE1-MOB4S4R3N1 261 aa10.76□□□□□ -0.69
SDC1-206ENST00000482879 HEATR1Q9H583 2144 aaKnown RBP10.75□□□□□ -0.69
SDC1-206ENST00000482879 PRODHO43272 600 aa10.75□□□□□ -0.69
SDC1-206ENST00000482879 ENTPD6O75354 484 aa10.75□□□□□ -0.69
SDC1-206ENST00000482879 SEC14L2O76054 403 aa10.75□□□□□ -0.69
SDC1-206ENST00000482879 GLCEO94923 617 aa10.75□□□□□ -0.69
SDC1-206ENST00000482879 CLDN14O95500 239 aa10.75□□□□□ -0.69
SDC1-206ENST00000482879 GPANK1O95872 356 aa10.75□□□□□ -0.69
SDC1-206ENST00000482879 HLA-DQA2P01906 255 aa10.75□□□□□ -0.69
SDC1-206ENST00000482879 COX5AP20674 150 aa10.75□□□□□ -0.69
SDC1-206ENST00000482879 SLC2A5P22732 501 aa10.75□□□□□ -0.69
SDC1-206ENST00000482879 MYF6P23409 242 aa10.75□□□□□ -0.69
SDC1-206ENST00000482879 FMO3P31513 532 aa10.75□□□□□ -0.69
SDC1-206ENST00000482879 CD79BP40259 229 aa10.75□□□□□ -0.69
SDC1-206ENST00000482879 SH3BGRP55822 239 aaPredicted RBP10.75□□□□□ -0.69
SDC1-206ENST00000482879 GLO1Q04760 184 aa10.75□□□□□ -0.69
SDC1-206ENST00000482879 FAM27E3Q08E93 113 aa10.75□□□□□ -0.69
SDC1-206ENST00000482879 TSC22D1Q15714 1073 aa10.75□□□□□ -0.69
SDC1-206ENST00000482879 OCLNQ16625 522 aa10.75□□□□□ -0.69
SDC1-206ENST00000482879 SLC35D3Q5M8T2 416 aa10.75□□□□□ -0.69
SDC1-206ENST00000482879 SLC25A30Q5SVS4 291 aa10.75□□□□□ -0.69
SDC1-206ENST00000482879 SFRP5Q5T4F7 317 aa10.75□□□□□ -0.69
SDC1-206ENST00000482879 MEDAGQ5VYS4 303 aa10.75□□□□□ -0.69
SDC1-206ENST00000482879 STAC2Q6ZMT1 411 aa10.75□□□□□ -0.69
SDC1-206ENST00000482879 ZNF813Q6ZN06 617 aa10.75□□□□□ -0.69
SDC1-206ENST00000482879 BHLHA15Q7RTS1 189 aaPredicted RBP10.75□□□□□ -0.69
SDC1-206ENST00000482879 GID4Q8IVV7 300 aa10.75□□□□□ -0.69
SDC1-206ENST00000482879 OR1K1Q8NGR3 316 aa10.75□□□□□ -0.69
SDC1-206ENST00000482879 OR6K6Q8NGW6 343 aa10.75□□□□□ -0.69
SDC1-206ENST00000482879 KISS1RQ969F8 398 aaPredicted RBP10.75□□□□□ -0.69
SDC1-206ENST00000482879 LRRC46Q96FV0 321 aa10.75□□□□□ -0.69
SDC1-206ENST00000482879 CNBD2Q96M20 576 aa10.75□□□□□ -0.69
SDC1-206ENST00000482879 Q96MT0 163 aa10.75□□□□□ -0.69
SDC1-206ENST00000482879 HDHD5Q9BXW7 423 aa10.75□□□□□ -0.69
SDC1-206ENST00000482879 ANKRD60Q9BZ19 345 aa10.75□□□□□ -0.69
SDC1-206ENST00000482879 TMEM38BQ9NVV0 291 aa10.75□□□□□ -0.69
SDC1-206ENST00000482879 GALNT8Q9NY28 637 aa10.75□□□□□ -0.69
SDC1-206ENST00000482879 RELNP78509 3460 aa10.74□□□□□ -0.69
SDC1-206ENST00000482879 A0A096LPE4 126 aa10.74□□□□□ -0.69
SDC1-206ENST00000482879 A0A1W2PPZ6 126 aa10.74□□□□□ -0.69
SDC1-206ENST00000482879 CCDC182A6NF36 153 aa10.74□□□□□ -0.69
SDC1-206ENST00000482879 TVP23AA6NH52 213 aa10.74□□□□□ -0.69
SDC1-206ENST00000482879 DENRO43583 198 aaKnown RBP10.74□□□□□ -0.69
SDC1-206ENST00000482879 RAD51DO75771 328 aa10.74□□□□□ -0.69
SDC1-206ENST00000482879 MPZL1O95297 269 aa10.74□□□□□ -0.69
SDC1-206ENST00000482879 B4GALT1P15291 398 aa10.74□□□□□ -0.69
SDC1-206ENST00000482879 NPR2P20594 1047 aa10.74□□□□□ -0.69
SDC1-206ENST00000482879 PSMB1P20618 241 aaKnown RBP10.74□□□□□ -0.69
SDC1-206ENST00000482879 IL32P24001 234 aa10.74□□□□□ -0.69
SDC1-206ENST00000482879 BLVRAP53004 296 aa10.74□□□□□ -0.69
SDC1-206ENST00000482879 CDH11P55287 796 aa10.74□□□□□ -0.69
SDC1-206ENST00000482879 MRPS34P82930 218 aaKnown RBP10.74□□□□□ -0.69
SDC1-206ENST00000482879 HSF2Q03933 536 aa10.74□□□□□ -0.69
SDC1-206ENST00000482879 CDK5R2Q13319 367 aa10.74□□□□□ -0.69
SDC1-206ENST00000482879 GABRA6Q16445 453 aa10.74□□□□□ -0.69
SDC1-206ENST00000482879 FBXL19-AS1Q494R0 122 aa10.74□□□□□ -0.69
SDC1-206ENST00000482879 LINC01590Q5TEZ4 76 aa10.74□□□□□ -0.69
SDC1-206ENST00000482879 LCN1P1Q5VSP4 162 aa10.74□□□□□ -0.69
SDC1-206ENST00000482879 ANKRD16Q6P6B7 361 aa10.74□□□□□ -0.69
SDC1-206ENST00000482879 KLHL24Q6TFL4 600 aa10.74□□□□□ -0.69
SDC1-206ENST00000482879 B3GLCTQ6Y288 498 aa10.74□□□□□ -0.69
SDC1-206ENST00000482879 FOXL2NBQ6ZUU3 175 aa10.74□□□□□ -0.69
SDC1-206ENST00000482879 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.74□□□□□ -0.69
SDC1-206ENST00000482879 ZNF511Q8NB15 262 aa10.74□□□□□ -0.69
SDC1-206ENST00000482879 CNIH3Q8TBE1 160 aa10.74□□□□□ -0.69
SDC1-206ENST00000482879 APH1BQ8WW43 257 aa10.74□□□□□ -0.69
SDC1-206ENST00000482879 HTRA1Q92743 480 aa10.74□□□□□ -0.69
SDC1-206ENST00000482879 BCL2L2Q92843 193 aaPredicted RBP10.74□□□□□ -0.69
SDC1-206ENST00000482879 RNASE6Q93091 150 aaKnown RBP10.74□□□□□ -0.69
SDC1-206ENST00000482879 RFKQ969G6 155 aa10.74□□□□□ -0.69
SDC1-206ENST00000482879 ZMYND19Q96E35 227 aaPredicted RBP10.74□□□□□ -0.69
SDC1-206ENST00000482879 TEAD3Q99594 435 aa10.74□□□□□ -0.69
SDC1-206ENST00000482879 SIAEQ9HAT2 523 aa10.74□□□□□ -0.69
SDC1-206ENST00000482879 POLE4Q9NR33 117 aa10.74□□□□□ -0.69
SDC1-206ENST00000482879 FLNCQ14315 2725 aa10.74□□□□□ -0.69
SDC1-206ENST00000482879 USP9XQ93008 2570 aaPredicted RBP10.73□□□□□ -0.69
SDC1-206ENST00000482879 SLC22A31A6NKX4 558 aa10.73□□□□□ -0.69
SDC1-206ENST00000482879 SNTNA6NMZ2 147 aa10.73□□□□□ -0.69
SDC1-206ENST00000482879 C16orf97H3BN30 126 aa10.73□□□□□ -0.69
SDC1-206ENST00000482879 WBP4O75554 376 aaKnown RBP10.73□□□□□ -0.69
SDC1-206ENST00000482879 FARS2O95363 451 aaKnown RBP10.73□□□□□ -0.69
SDC1-206ENST00000482879 TFP02787 698 aa10.73□□□□□ -0.69
SDC1-206ENST00000482879 SCG5P05408 212 aa10.73□□□□□ -0.69
SDC1-206ENST00000482879 OR8G3PP0DMU2 310 aa10.73□□□□□ -0.69
SDC1-206ENST00000482879 GAAP10253 952 aa10.73□□□□□ -0.69
SDC1-206ENST00000482879 ZNF823P16415 610 aa10.73□□□□□ -0.69
SDC1-206ENST00000482879 MSR1P21757 451 aa10.73□□□□□ -0.69
SDC1-206ENST00000482879 GSTT1P30711 240 aa10.73□□□□□ -0.69
SDC1-206ENST00000482879 HTR1FP30939 366 aa10.73□□□□□ -0.69
SDC1-206ENST00000482879 TEKQ02763 1124 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms