RNA–Protein interactions for RNA: ENST00000481929.5

HDAC6-224, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-224ENST00000481929 PLPP3O14495 311 aa12.51□□□□□ -0.41
HDAC6-224ENST00000481929 PIP5K1CO60331 668 aa12.51□□□□□ -0.41
HDAC6-224ENST00000481929 HNRNPCL1O60812 293 aaKnown RBP12.51□□□□□ -0.41
HDAC6-224ENST00000481929 HNRNPCL4P0DMR1 293 aa12.51□□□□□ -0.41
HDAC6-224ENST00000481929 ETFAP13804 333 aa12.51□□□□□ -0.41
HDAC6-224ENST00000481929 TNFRSF1AP19438 455 aa12.51□□□□□ -0.41
HDAC6-224ENST00000481929 TNFSF4P23510 183 aa12.51□□□□□ -0.41
HDAC6-224ENST00000481929 RBMXP38159 391 aaKnown RBP12.51□□□□□ -0.41
HDAC6-224ENST00000481929 CRATP43155 626 aa12.51□□□□□ -0.41
HDAC6-224ENST00000481929 LOXL3P58215 753 aa12.51□□□□□ -0.41
HDAC6-224ENST00000481929 DSTNP60981 165 aa12.51□□□□□ -0.41
HDAC6-224ENST00000481929 GNB2P62879 340 aa12.51□□□□□ -0.41
HDAC6-224ENST00000481929 LRFN4Q6PJG9 635 aa12.51□□□□□ -0.41
HDAC6-224ENST00000481929 LSMEM1Q8N8F7 131 aa12.51□□□□□ -0.41
HDAC6-224ENST00000481929 HIPK4Q8NE63 616 aa12.51□□□□□ -0.41
HDAC6-224ENST00000481929 TBC1D15Q8TC07 691 aa12.51□□□□□ -0.41
HDAC6-224ENST00000481929 ZNF566Q969W8 418 aa12.51□□□□□ -0.41
HDAC6-224ENST00000481929 TMEM19Q96HH6 336 aa12.51□□□□□ -0.41
HDAC6-224ENST00000481929 MOGAT1Q96PD6 335 aa12.51□□□□□ -0.41
HDAC6-224ENST00000481929 RHOXF2Q9BQY4 288 aa12.51□□□□□ -0.41
HDAC6-224ENST00000481929 OR2J1Q9GZK6 312 aa12.51□□□□□ -0.41
HDAC6-224ENST00000481929 SELENONQ9NZV5 590 aa12.51□□□□□ -0.41
HDAC6-224ENST00000481929 TENM3Q9P273 2699 aa12.51□□□□□ -0.41
HDAC6-224ENST00000481929 GPR137BO60478 399 aa12.5□□□□□ -0.41
HDAC6-224ENST00000481929 WNT2P09544 360 aa12.5□□□□□ -0.41
HDAC6-224ENST00000481929 ADORA3P0DMS8 318 aa12.5□□□□□ -0.41
HDAC6-224ENST00000481929 RPS2P15880 293 aaKnown RBP12.5□□□□□ -0.41
HDAC6-224ENST00000481929 CPT2P23786 658 aa12.5□□□□□ -0.41
HDAC6-224ENST00000481929 STOMP27105 288 aa12.5□□□□□ -0.41
HDAC6-224ENST00000481929 WNT5AP41221 380 aa12.5□□□□□ -0.41
HDAC6-224ENST00000481929 LRRC74AQ0VAA2 488 aa12.5□□□□□ -0.41
HDAC6-224ENST00000481929 WHAMMP3Q1A5X7 153 aa12.5□□□□□ -0.41
HDAC6-224ENST00000481929 NRN1LQ496H8 165 aa12.5□□□□□ -0.41
HDAC6-224ENST00000481929 TTMPQ5BVD1 217 aa12.5□□□□□ -0.41
HDAC6-224ENST00000481929 MTX3Q5HYI7 312 aa12.5□□□□□ -0.41
HDAC6-224ENST00000481929 PABPC1L2AQ5JQF8 200 aa12.5□□□□□ -0.41
HDAC6-224ENST00000481929 ULK3Q6PHR2 472 aa12.5□□□□□ -0.41
HDAC6-224ENST00000481929 SLC35D2Q76EJ3 337 aa12.5□□□□□ -0.41
HDAC6-224ENST00000481929 C1orf174Q8IYL3 243 aa12.5□□□□□ -0.41
HDAC6-224ENST00000481929 APOPT1Q96IL0 206 aa12.5□□□□□ -0.41
HDAC6-224ENST00000481929 SAMD8Q96LT4 415 aa12.5□□□□□ -0.41
HDAC6-224ENST00000481929 MKS1Q9NXB0 559 aa12.5□□□□□ -0.41
HDAC6-224ENST00000481929 KIR2DS1A0A191URI9 304 aa12.49□□□□□ -0.41
HDAC6-224ENST00000481929 C5orf49A4QMS7 147 aa12.49□□□□□ -0.41
HDAC6-224ENST00000481929 LRRN3E7EW58 273 aa12.49□□□□□ -0.41
HDAC6-224ENST00000481929 H3BSA7 217 aa12.49□□□□□ -0.41
HDAC6-224ENST00000481929 TIMM8AO60220 97 aaPredicted RBP12.49□□□□□ -0.41
HDAC6-224ENST00000481929 OR6A2O95222 327 aa12.49□□□□□ -0.41
HDAC6-224ENST00000481929 MMP7P09237 267 aaPredicted RBP12.49□□□□□ -0.41
HDAC6-224ENST00000481929 QDPRP09417 244 aa12.49□□□□□ -0.41
HDAC6-224ENST00000481929 VSIG8P0DPA2 414 aa12.49□□□□□ -0.41
HDAC6-224ENST00000481929 HTR2AP28223 471 aa12.49□□□□□ -0.41
HDAC6-224ENST00000481929 ZNF84P51523 738 aa12.49□□□□□ -0.41
HDAC6-224ENST00000481929 MVDP53602 400 aa12.49□□□□□ -0.41
HDAC6-224ENST00000481929 PPP1CBP62140 327 aa12.49□□□□□ -0.41
HDAC6-224ENST00000481929 FAM91A1Q658Y4 838 aa12.49□□□□□ -0.41
HDAC6-224ENST00000481929 ZNF774Q6NX45 483 aa12.49□□□□□ -0.41
HDAC6-224ENST00000481929 ZER1Q7Z7L7 766 aa12.49□□□□□ -0.41
HDAC6-224ENST00000481929 LRRC18Q8N456 261 aa12.49□□□□□ -0.41
HDAC6-224ENST00000481929 OR5J2Q8NH18 312 aa12.49□□□□□ -0.41
HDAC6-224ENST00000481929 DACT3Q96B18 629 aaPredicted RBP12.49□□□□□ -0.41
HDAC6-224ENST00000481929 SLC25A44Q96H78 314 aaPredicted RBP12.49□□□□□ -0.41
HDAC6-224ENST00000481929 PLEKHA8Q96JA3 519 aa12.49□□□□□ -0.41
HDAC6-224ENST00000481929 OR52E6Q96RD3 313 aa12.49□□□□□ -0.41
HDAC6-224ENST00000481929 SIGLEC11Q96RL6 698 aa12.49□□□□□ -0.41
HDAC6-224ENST00000481929 NUDT16L1Q9BRJ7 211 aaKnown RBP12.49□□□□□ -0.41
HDAC6-224ENST00000481929 TXLNGYQ9BZA5 131 aa12.49□□□□□ -0.41
HDAC6-224ENST00000481929 KCNN2Q9H2S1 579 aa12.49□□□□□ -0.41
HDAC6-224ENST00000481929 PPCSQ9HAB8 311 aa12.49□□□□□ -0.41
HDAC6-224ENST00000481929 SLC17A7Q9P2U7 560 aa12.49□□□□□ -0.41
HDAC6-224ENST00000481929 PPP1R3CQ9UQK1 317 aa12.49□□□□□ -0.41
HDAC6-224ENST00000481929 NOTCH3Q9UM47 2321 aa12.49□□□□□ -0.41
HDAC6-224ENST00000481929 H0YL77 283 aa12.48□□□□□ -0.41
HDAC6-224ENST00000481929 PLXNB1O43157 2135 aa12.48□□□□□ -0.41
HDAC6-224ENST00000481929 OPN1MWP04001 364 aa12.48□□□□□ -0.41
HDAC6-224ENST00000481929 SHBGP04278 402 aa12.48□□□□□ -0.41
HDAC6-224ENST00000481929 FAM153BP0C7A2 387 aa12.48□□□□□ -0.41
HDAC6-224ENST00000481929 OPN1MW2P0DN77 364 aa12.48□□□□□ -0.41
HDAC6-224ENST00000481929 OPN1MW3P0DN78 364 aa12.48□□□□□ -0.41
HDAC6-224ENST00000481929 THRBP10828 461 aa12.48□□□□□ -0.41
HDAC6-224ENST00000481929 GDI2P50395 445 aaKnown RBP12.48□□□□□ -0.41
HDAC6-224ENST00000481929 NME5P56597 212 aa12.48□□□□□ -0.41
HDAC6-224ENST00000481929 FGF12P61328 243 aa12.48□□□□□ -0.41
HDAC6-224ENST00000481929 NCALDP61601 193 aa12.48□□□□□ -0.41
HDAC6-224ENST00000481929 CDK5R2Q13319 367 aa12.48□□□□□ -0.41
HDAC6-224ENST00000481929 MELKQ14680 651 aa12.48□□□□□ -0.41
HDAC6-224ENST00000481929 RUSC1-AS1Q66K80 236 aa12.48□□□□□ -0.41
HDAC6-224ENST00000481929 RFPL4BQ6ZWI9 263 aa12.48□□□□□ -0.41
HDAC6-224ENST00000481929 KLBQ86Z14 1044 aa12.48□□□□□ -0.41
HDAC6-224ENST00000481929 ABHD4Q8TB40 342 aa12.48□□□□□ -0.41
HDAC6-224ENST00000481929 PPP1R14AQ96A00 147 aa12.48□□□□□ -0.41
HDAC6-224ENST00000481929 POM121L2Q96KW2 1035 aa12.48□□□□□ -0.41
HDAC6-224ENST00000481929 TEX37Q96LM6 180 aa12.48□□□□□ -0.41
HDAC6-224ENST00000481929 CCNB1IP1Q9NPC3 277 aa12.48□□□□□ -0.41
HDAC6-224ENST00000481929 THUMPD1Q9NXG2 353 aaKnown RBP12.48□□□□□ -0.41
HDAC6-224ENST00000481929 KIF17Q9P2E2 1029 aa12.48□□□□□ -0.41
HDAC6-224ENST00000481929 MIOXQ9UGB7 285 aa12.48□□□□□ -0.41
HDAC6-224ENST00000481929 TET2Q6N021 2002 aaPredicted RBP12.48□□□□□ -0.41
HDAC6-224ENST00000481929 DOCK11Q5JSL3 2073 aa12.47□□□□□ -0.41
HDAC6-224ENST00000481929 TMEM178BH3BS89 294 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms