RNA–Protein interactions for RNA: ENST00000481641.1

CLK1-211, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 690 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-211ENST00000481641 TMEFF2Q9UIK5 374 aaPredicted RBP15.88■□□□□ 0.13
CLK1-211ENST00000481641 SLC22A23A1A5C7 686 aa15.87■□□□□ 0.13
CLK1-211ENST00000481641 CENPBD1B2RD01 187 aa15.87■□□□□ 0.13
CLK1-211ENST00000481641 THRBP10828 461 aa15.87■□□□□ 0.13
CLK1-211ENST00000481641 ACHEP22303 614 aa15.87■□□□□ 0.13
CLK1-211ENST00000481641 CCNOP22674 350 aa15.87■□□□□ 0.13
CLK1-211ENST00000481641 UCP2P55851 309 aa15.87■□□□□ 0.13
CLK1-211ENST00000481641 KLF3P57682 345 aaPredicted RBP15.87■□□□□ 0.13
CLK1-211ENST00000481641 HSF2Q03933 536 aa15.87■□□□□ 0.13
CLK1-211ENST00000481641 GLO1Q04760 184 aa15.87■□□□□ 0.13
CLK1-211ENST00000481641 PLP2Q04941 152 aa15.87■□□□□ 0.13
CLK1-211ENST00000481641 CD47Q08722 323 aa15.87■□□□□ 0.13
CLK1-211ENST00000481641 ST3GAL3Q11203 375 aa15.87■□□□□ 0.13
CLK1-211ENST00000481641 NRN1LQ496H8 165 aa15.87■□□□□ 0.13
CLK1-211ENST00000481641 ALG10Q5BKT4 473 aa15.87■□□□□ 0.13
CLK1-211ENST00000481641 SLC25A47Q6Q0C1 308 aa15.87■□□□□ 0.13
CLK1-211ENST00000481641 HDDC2Q7Z4H3 204 aa15.87■□□□□ 0.13
CLK1-211ENST00000481641 BPIFA2Q96DR5 249 aa15.87■□□□□ 0.13
CLK1-211ENST00000481641 C1orf159Q96HA4 380 aa15.87■□□□□ 0.13
CLK1-211ENST00000481641 PRRC1Q96M27 445 aa15.87■□□□□ 0.13
CLK1-211ENST00000481641 SIAEQ9HAT2 523 aa15.87■□□□□ 0.13
CLK1-211ENST00000481641 MRGBPQ9NV56 204 aa15.87■□□□□ 0.13
CLK1-211ENST00000481641 ZNF346Q9UL40 294 aaKnown RBP15.87■□□□□ 0.13
CLK1-211ENST00000481641 IGLV3-9A0A075B6K5 115 aa15.86■□□□□ 0.13
CLK1-211ENST00000481641 FAM157AC9JC47 383 aa15.86■□□□□ 0.13
CLK1-211ENST00000481641 PPIHO43447 177 aaKnown RBP15.86■□□□□ 0.13
CLK1-211ENST00000481641 MGRN1O60291 552 aa15.86■□□□□ 0.13
CLK1-211ENST00000481641 CDC14BO60729 498 aa15.86■□□□□ 0.13
CLK1-211ENST00000481641 SNAP29O95721 258 aa15.86■□□□□ 0.13
CLK1-211ENST00000481641 ZNF250P15622 560 aa15.86■□□□□ 0.13
CLK1-211ENST00000481641 ZNF32P17041 273 aa15.86■□□□□ 0.13
CLK1-211ENST00000481641 APLNRP35414 380 aa15.86■□□□□ 0.13
CLK1-211ENST00000481641 THBS2P35442 1172 aa15.86■□□□□ 0.13
CLK1-211ENST00000481641 CCL8P80075 99 aa15.86■□□□□ 0.13
CLK1-211ENST00000481641 MRPS34P82930 218 aaKnown RBP15.86■□□□□ 0.13
CLK1-211ENST00000481641 SLC15A3Q8IY34 581 aa15.86■□□□□ 0.13
CLK1-211ENST00000481641 OR1J2Q8NGS2 313 aa15.86■□□□□ 0.13
CLK1-211ENST00000481641 OR51A7Q8NH64 312 aa15.86■□□□□ 0.13
CLK1-211ENST00000481641 AKR7LQ8NHP1 331 aa15.86■□□□□ 0.13
CLK1-211ENST00000481641 ZNF519Q8TB69 540 aa15.86■□□□□ 0.13
CLK1-211ENST00000481641 C11orf40Q8WZ69 217 aa15.86■□□□□ 0.13
CLK1-211ENST00000481641 C1orf198Q9H425 327 aa15.86■□□□□ 0.13
CLK1-211ENST00000481641 LPAR2Q9HBW0 351 aa15.86■□□□□ 0.13
CLK1-211ENST00000481641 CCNB1IP1Q9NPC3 277 aa15.86■□□□□ 0.13
CLK1-211ENST00000481641 HINT3Q9NQE9 182 aaKnown RBP15.86■□□□□ 0.13
CLK1-211ENST00000481641 MAN2C1Q9NTJ4 1040 aa15.86■□□□□ 0.13
CLK1-211ENST00000481641 TREM2Q9NZC2 230 aa15.86■□□□□ 0.13
CLK1-211ENST00000481641 HIF3AQ9Y2N7 669 aa15.86■□□□□ 0.13
CLK1-211ENST00000481641 TRAV27A0A087WT01 109 aa15.85■□□□□ 0.13
CLK1-211ENST00000481641 C17orf100A8MU93 164 aa15.85■□□□□ 0.13
CLK1-211ENST00000481641 FFAR1O14842 300 aa15.85■□□□□ 0.13
CLK1-211ENST00000481641 RP2O75695 350 aa15.85■□□□□ 0.13
CLK1-211ENST00000481641 PTHP01270 115 aa15.85■□□□□ 0.13
CLK1-211ENST00000481641 SAGP10523 405 aaPredicted RBP15.85■□□□□ 0.13
CLK1-211ENST00000481641 STOMP27105 288 aa15.85■□□□□ 0.13
CLK1-211ENST00000481641 RAD52P43351 418 aa15.85■□□□□ 0.13
CLK1-211ENST00000481641 SELENOVP59797 346 aa15.85■□□□□ 0.13
CLK1-211ENST00000481641 CTXN1P60606 82 aa15.85■□□□□ 0.13
CLK1-211ENST00000481641 RPL27P61353 136 aaKnown RBP15.85■□□□□ 0.13
CLK1-211ENST00000481641 ERVK-25P63136 954 aa15.85■□□□□ 0.13
CLK1-211ENST00000481641 LIPEQ05469 1076 aa15.85■□□□□ 0.13
CLK1-211ENST00000481641 SPATA46Q5T0L3 261 aa15.85■□□□□ 0.13
CLK1-211ENST00000481641 RINLQ6ZS11 566 aa15.85■□□□□ 0.13
CLK1-211ENST00000481641 NRMQ8IXM6 262 aa15.85■□□□□ 0.13
CLK1-211ENST00000481641 LRRC75AQ8NAA5 344 aa15.85■□□□□ 0.13
CLK1-211ENST00000481641 OR1J1Q8NGS3 322 aa15.85■□□□□ 0.13
CLK1-211ENST00000481641 C19orf24Q9BVV8 132 aa15.85■□□□□ 0.13
CLK1-211ENST00000481641 RACGAP1Q9H0H5 632 aa15.85■□□□□ 0.13
CLK1-211ENST00000481641 LRMDAQ9H2I8 198 aa15.85■□□□□ 0.13
CLK1-211ENST00000481641 KCNN2Q9H2S1 579 aa15.85■□□□□ 0.13
CLK1-211ENST00000481641 LOC100509620A0A075B734 347 aa15.84■□□□□ 0.13
CLK1-211ENST00000481641 ZNF682O95780 498 aa15.84■□□□□ 0.13
CLK1-211ENST00000481641 SRP14P37108 136 aaKnown RBP15.84■□□□□ 0.13
CLK1-211ENST00000481641 WNT5AP41221 380 aa15.84■□□□□ 0.13
CLK1-211ENST00000481641 DVL1P1P54792 670 aaPredicted RBP15.84■□□□□ 0.13
CLK1-211ENST00000481641 TMEM33P57088 247 aa15.84■□□□□ 0.13
CLK1-211ENST00000481641 PSG4Q00888 419 aa15.84■□□□□ 0.13
CLK1-211ENST00000481641 FHL1Q13642 323 aa15.84■□□□□ 0.13
CLK1-211ENST00000481641 TMEM255AQ5JRV8 349 aa15.84■□□□□ 0.13
CLK1-211ENST00000481641 TMEM154Q6P9G4 183 aa15.84■□□□□ 0.13
CLK1-211ENST00000481641 TBPL2Q6SJ96 375 aa15.84■□□□□ 0.13
CLK1-211ENST00000481641 ZNF101Q8IZC7 436 aa15.84■□□□□ 0.13
CLK1-211ENST00000481641 SNX33Q8WV41 574 aa15.84■□□□□ 0.13
CLK1-211ENST00000481641 LZICQ8WZA0 190 aa15.84■□□□□ 0.13
CLK1-211ENST00000481641 POM121L2Q96KW2 1035 aa15.84■□□□□ 0.13
CLK1-211ENST00000481641 FNDC11Q9BVV2 318 aa15.84■□□□□ 0.13
CLK1-211ENST00000481641 BCL2L14Q9BZR8 327 aa15.84■□□□□ 0.13
CLK1-211ENST00000481641 SMURF2Q9HAU4 748 aa15.84■□□□□ 0.13
CLK1-211ENST00000481641 STX18Q9P2W9 335 aaKnown RBP15.84■□□□□ 0.13
CLK1-211ENST00000481641 C5orf49A4QMS7 147 aa15.83■□□□□ 0.12
CLK1-211ENST00000481641 NPIPB13A6NJU9 1138 aa15.83■□□□□ 0.12
CLK1-211ENST00000481641 B4DSR2 109 aa15.83■□□□□ 0.12
CLK1-211ENST00000481641 NPIPB4C9JG80 1138 aa15.83■□□□□ 0.12
CLK1-211ENST00000481641 CXCR6O00574 342 aa15.83■□□□□ 0.12
CLK1-211ENST00000481641 NME4O00746 187 aa15.83■□□□□ 0.12
CLK1-211ENST00000481641 IFNW1P05000 195 aa15.83■□□□□ 0.12
CLK1-211ENST00000481641 COX4I1P13073 169 aa15.83■□□□□ 0.12
CLK1-211ENST00000481641 LAP3P28838 519 aa15.83■□□□□ 0.12
CLK1-211ENST00000481641 MPV17P39210 176 aa15.83■□□□□ 0.12
CLK1-211ENST00000481641 SLC7A2P52569 658 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms