RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 ARMC4Q5T2S8 1044 aa9.86□□□□□ -0.83
CCM2-213ENST00000480658 FAM27BQ5VT28 67 aa9.86□□□□□ -0.83
CCM2-213ENST00000480658 MBOAT2Q6ZWT7 520 aa9.86□□□□□ -0.83
CCM2-213ENST00000480658 MYPOPQ86VE0 399 aaPredicted RBP9.86□□□□□ -0.83
CCM2-213ENST00000480658 PRIMA1Q86XR5 153 aa9.86□□□□□ -0.83
CCM2-213ENST00000480658 NRMQ8IXM6 262 aa9.86□□□□□ -0.83
CCM2-213ENST00000480658 SLC15A3Q8IY34 581 aa9.86□□□□□ -0.83
CCM2-213ENST00000480658 SYT14Q8NB59 555 aa9.86□□□□□ -0.83
CCM2-213ENST00000480658 SYNPRQ8TBG9 265 aa9.86□□□□□ -0.83
CCM2-213ENST00000480658 IPCEF1Q8WWN9 437 aaPredicted RBP9.86□□□□□ -0.83
CCM2-213ENST00000480658 RDH5Q92781 318 aa9.86□□□□□ -0.83
CCM2-213ENST00000480658 POP5Q969H6 163 aaKnown RBP9.86□□□□□ -0.83
CCM2-213ENST00000480658 MS4A3Q96HJ5 214 aa9.86□□□□□ -0.83
CCM2-213ENST00000480658 FOXN4Q96NZ1 517 aa9.86□□□□□ -0.83
CCM2-213ENST00000480658 ZNF347Q96SE7 839 aa9.86□□□□□ -0.83
CCM2-213ENST00000480658 MRPL37Q9BZE1 423 aaKnown RBP9.86□□□□□ -0.83
CCM2-213ENST00000480658 SEC61A2Q9H9S3 476 aa9.86□□□□□ -0.83
CCM2-213ENST00000480658 ELOVL3Q9HB03 270 aa9.86□□□□□ -0.83
CCM2-213ENST00000480658 C20orf141Q9NUB4 165 aa9.86□□□□□ -0.83
CCM2-213ENST00000480658 ZNF446Q9NWS9 450 aa9.86□□□□□ -0.83
CCM2-213ENST00000480658 NKIRAS2Q9NYR9 191 aa9.86□□□□□ -0.83
CCM2-213ENST00000480658 PLCE1Q9P212 2302 aa9.86□□□□□ -0.83
CCM2-213ENST00000480658 ARMCX1Q9P291 453 aa9.86□□□□□ -0.83
CCM2-213ENST00000480658 ABCD2Q9UBJ2 740 aa9.86□□□□□ -0.83
CCM2-213ENST00000480658 NDRG4Q9ULP0 352 aaKnown RBP9.86□□□□□ -0.83
CCM2-213ENST00000480658 CADP27708 2225 aa9.86□□□□□ -0.83
CCM2-213ENST00000480658 FN1P02751 2386 aaKnown RBP9.85□□□□□ -0.83
CCM2-213ENST00000480658 IGLV3-9A0A075B6K5 115 aa9.85□□□□□ -0.83
CCM2-213ENST00000480658 A0A1W2PRQ8 180 aa9.85□□□□□ -0.83
CCM2-213ENST00000480658 PLSCR5A0PG75 271 aa9.85□□□□□ -0.83
CCM2-213ENST00000480658 SH3PXD2BA1X283 911 aa9.85□□□□□ -0.83
CCM2-213ENST00000480658 GPRIN2O60269 458 aa9.85□□□□□ -0.83
CCM2-213ENST00000480658 ICMTO60725 284 aa9.85□□□□□ -0.83
CCM2-213ENST00000480658 SERPINA1P01009 418 aa9.85□□□□□ -0.83
CCM2-213ENST00000480658 CST2P09228 141 aa9.85□□□□□ -0.83
CCM2-213ENST00000480658 ANPEPP15144 967 aa9.85□□□□□ -0.83
CCM2-213ENST00000480658 SRD5A1P18405 259 aa9.85□□□□□ -0.83
CCM2-213ENST00000480658 STOMP27105 288 aa9.85□□□□□ -0.83
CCM2-213ENST00000480658 GCH1P30793 250 aa9.85□□□□□ -0.83
CCM2-213ENST00000480658 MNAT1P51948 309 aa9.85□□□□□ -0.83
CCM2-213ENST00000480658 UCP2P55851 309 aa9.85□□□□□ -0.83
CCM2-213ENST00000480658 RIN1Q13671 783 aa9.85□□□□□ -0.83
CCM2-213ENST00000480658 DGCR6Q14129 220 aa9.85□□□□□ -0.83
CCM2-213ENST00000480658 C8orf82Q6P1X6 216 aaPredicted RBP9.85□□□□□ -0.83
CCM2-213ENST00000480658 PGM2L1Q6PCE3 622 aa9.85□□□□□ -0.83
CCM2-213ENST00000480658 TMPRSS11FQ6ZWK6 438 aa9.85□□□□□ -0.83
CCM2-213ENST00000480658 CXXC5Q7LFL8 322 aaKnown RBP9.85□□□□□ -0.83
CCM2-213ENST00000480658 ADCK1Q86TW2 530 aa9.85□□□□□ -0.83
CCM2-213ENST00000480658 TSPYL5Q86VY4 417 aaPredicted RBP9.85□□□□□ -0.83
CCM2-213ENST00000480658 ZNF584Q8IVC4 421 aa9.85□□□□□ -0.83
CCM2-213ENST00000480658 LINC01356Q8N9X3 169 aa9.85□□□□□ -0.83
CCM2-213ENST00000480658 HSH2DQ96JZ2 352 aa9.85□□□□□ -0.83
CCM2-213ENST00000480658 DIRC2Q96SL1 478 aa9.85□□□□□ -0.83
CCM2-213ENST00000480658 SH3GL3Q99963 347 aa9.85□□□□□ -0.83
CCM2-213ENST00000480658 CMTM6Q9NX76 183 aa9.85□□□□□ -0.83
CCM2-213ENST00000480658 DUSP13Q9UII6 198 aa9.85□□□□□ -0.83
CCM2-213ENST00000480658 MAGEL2Q9UJ55 1249 aa9.85□□□□□ -0.83
CCM2-213ENST00000480658 TIMM10BQ9Y5J6 103 aa9.85□□□□□ -0.83
CCM2-213ENST00000480658 CR1P17927 2039 aa9.84□□□□□ -0.83
CCM2-213ENST00000480658 CHD3Q12873 2000 aaKnown RBP9.84□□□□□ -0.83
CCM2-213ENST00000480658 TMEM129A0AVI4 362 aa9.84□□□□□ -0.83
CCM2-213ENST00000480658 B4DSR2 109 aa9.84□□□□□ -0.83
CCM2-213ENST00000480658 J3QW42 95 aa9.84□□□□□ -0.83
CCM2-213ENST00000480658 LY6HO94772 140 aa9.84□□□□□ -0.83
CCM2-213ENST00000480658 LCKP06239 509 aa9.84□□□□□ -0.83
CCM2-213ENST00000480658 RHCEP18577 417 aa9.84□□□□□ -0.83
CCM2-213ENST00000480658 TNFRSF1BP20333 461 aa9.84□□□□□ -0.83
CCM2-213ENST00000480658 MSR1P21757 451 aa9.84□□□□□ -0.83
CCM2-213ENST00000480658 APEX1P27695 318 aaKnown RBP9.84□□□□□ -0.83
CCM2-213ENST00000480658 RPL4P36578 427 aaKnown RBP9.84□□□□□ -0.83
CCM2-213ENST00000480658 IFNGR2P38484 337 aa9.84□□□□□ -0.83
CCM2-213ENST00000480658 GPR6P46095 362 aaPredicted RBP9.84□□□□□ -0.83
CCM2-213ENST00000480658 GSK3BP49841 420 aa9.84□□□□□ -0.83
CCM2-213ENST00000480658 GDI2P50395 445 aaKnown RBP9.84□□□□□ -0.83
CCM2-213ENST00000480658 CTXN1P60606 82 aa9.84□□□□□ -0.83
CCM2-213ENST00000480658 SLC3A1Q07837 685 aa9.84□□□□□ -0.83
CCM2-213ENST00000480658 SCRN3Q0VDG4 424 aa9.84□□□□□ -0.83
CCM2-213ENST00000480658 ZNF718Q3SXZ3 478 aa9.84□□□□□ -0.83
CCM2-213ENST00000480658 GPR139Q6DWJ6 353 aa9.84□□□□□ -0.83
CCM2-213ENST00000480658 DNM1P34Q6PK57 102 aa9.84□□□□□ -0.83
CCM2-213ENST00000480658 CPLX4Q7Z7G2 160 aa9.84□□□□□ -0.83
CCM2-213ENST00000480658 LRRC18Q8N456 261 aa9.84□□□□□ -0.83
CCM2-213ENST00000480658 POU5F2Q8N7G0 328 aa9.84□□□□□ -0.83
CCM2-213ENST00000480658 NPEPL1Q8NDH3 523 aa9.84□□□□□ -0.83
CCM2-213ENST00000480658 MCUR1Q96AQ8 359 aa9.84□□□□□ -0.83
CCM2-213ENST00000480658 TIMD4Q96H15 378 aa9.84□□□□□ -0.83
CCM2-213ENST00000480658 SYT3Q9BQG1 590 aa9.84□□□□□ -0.83
CCM2-213ENST00000480658 HINT3Q9NQE9 182 aaKnown RBP9.84□□□□□ -0.83
CCM2-213ENST00000480658 DECR2Q9NUI1 292 aa9.84□□□□□ -0.83
CCM2-213ENST00000480658 ENPP4Q9Y6X5 453 aa9.84□□□□□ -0.83
CCM2-213ENST00000480658 ZANQ9Y493 2812 aa9.84□□□□□ -0.83
CCM2-213ENST00000480658 PRR14LQ5THK1 2151 aa9.83□□□□□ -0.84
CCM2-213ENST00000480658 IGHV4-61A0A0C4DH41 118 aa9.83□□□□□ -0.84
CCM2-213ENST00000480658 C17orf100A8MU93 164 aa9.83□□□□□ -0.84
CCM2-213ENST00000480658 NME4O00746 187 aa9.83□□□□□ -0.84
CCM2-213ENST00000480658 SHOX2O60902 331 aaPredicted RBP9.83□□□□□ -0.84
CCM2-213ENST00000480658 DCTN3O75935 186 aa9.83□□□□□ -0.84
CCM2-213ENST00000480658 TGFAP01135 160 aa9.83□□□□□ -0.84
CCM2-213ENST00000480658 IGHV3-13P01766 116 aa9.83□□□□□ -0.84
CCM2-213ENST00000480658 H1F0P07305 194 aaKnown RBP9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms