RNA–Protein interactions for RNA: ENST00000478214.1

HMGA1-206, Transcript of high mobility group AT-hook 1, humanhuman

TSL 1 (best)

Gene HMGA1, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-206ENST00000478214 GSSP48637 474 aa13.49□□□□□ -0.25
HMGA1-206ENST00000478214 ADIPOQQ15848 244 aa13.49□□□□□ -0.25
HMGA1-206ENST00000478214 MST1LQ2TV78 715 aa13.49□□□□□ -0.25
HMGA1-206ENST00000478214 SLC36A2Q495M3 483 aa13.49□□□□□ -0.25
HMGA1-206ENST00000478214 FAM98BQ52LJ0 330 aaKnown RBP13.49□□□□□ -0.25
HMGA1-206ENST00000478214 GPR139Q6DWJ6 353 aa13.49□□□□□ -0.25
HMGA1-206ENST00000478214 KRT80Q6KB66 452 aa13.49□□□□□ -0.25
HMGA1-206ENST00000478214 C1orf94Q6P1W5 598 aa13.49□□□□□ -0.25
HMGA1-206ENST00000478214 TMEM53Q6P2H8 277 aa13.49□□□□□ -0.25
HMGA1-206ENST00000478214 PGBD2Q6P3X8 592 aa13.49□□□□□ -0.25
HMGA1-206ENST00000478214 SMARCD3Q6STE5 483 aa13.49□□□□□ -0.25
HMGA1-206ENST00000478214 DPY19L2P2Q6ZN68 376 aa13.49□□□□□ -0.25
HMGA1-206ENST00000478214 ADGRG5Q8IZF4 528 aa13.49□□□□□ -0.25
HMGA1-206ENST00000478214 NUP37Q8NFH4 326 aa13.49□□□□□ -0.25
HMGA1-206ENST00000478214 OR9Q2Q8NGE9 314 aa13.49□□□□□ -0.25
HMGA1-206ENST00000478214 OR4C15Q8NGM1 316 aa13.49□□□□□ -0.25
HMGA1-206ENST00000478214 FANK1Q8TC84 345 aa13.49□□□□□ -0.25
HMGA1-206ENST00000478214 FNDC8Q8TC99 324 aa13.49□□□□□ -0.25
HMGA1-206ENST00000478214 VNN3Q9NY84 501 aa13.49□□□□□ -0.25
HMGA1-206ENST00000478214 IER3IP1Q9Y5U9 82 aa13.49□□□□□ -0.25
HMGA1-206ENST00000478214 PRSS37A4D1T9 235 aa13.48□□□□□ -0.25
HMGA1-206ENST00000478214 TRIM64A6NGJ6 449 aa13.48□□□□□ -0.25
HMGA1-206ENST00000478214 TRIM64BA6NI03 449 aa13.48□□□□□ -0.25
HMGA1-206ENST00000478214 IMPA2O14732 288 aa13.48□□□□□ -0.25
HMGA1-206ENST00000478214 PPP1R3DO95685 299 aa13.48□□□□□ -0.25
HMGA1-206ENST00000478214 MMP7P09237 267 aaPredicted RBP13.48□□□□□ -0.25
HMGA1-206ENST00000478214 OR4A8P0C604 315 aa13.48□□□□□ -0.25
HMGA1-206ENST00000478214 ZNF35P13682 527 aa13.48□□□□□ -0.25
HMGA1-206ENST00000478214 NPR2P20594 1047 aa13.48□□□□□ -0.25
HMGA1-206ENST00000478214 SDHAP31040 664 aa13.48□□□□□ -0.25
HMGA1-206ENST00000478214 THBS4P35443 961 aa13.48□□□□□ -0.25
HMGA1-206ENST00000478214 SERPINF1P36955 418 aa13.48□□□□□ -0.25
HMGA1-206ENST00000478214 BNIP1Q12981 228 aa13.48□□□□□ -0.25
HMGA1-206ENST00000478214 SNTB2Q13425 540 aaKnown RBP13.48□□□□□ -0.25
HMGA1-206ENST00000478214 KRR1Q13601 381 aaKnown RBP13.48□□□□□ -0.25
HMGA1-206ENST00000478214 DAG1Q14118 895 aa13.48□□□□□ -0.25
HMGA1-206ENST00000478214 SWI5Q1ZZU3 235 aa13.48□□□□□ -0.25
HMGA1-206ENST00000478214 RFX4Q33E94 735 aa13.48□□□□□ -0.25
HMGA1-206ENST00000478214 OR2T5Q6IEZ7 315 aa13.48□□□□□ -0.25
HMGA1-206ENST00000478214 DPPA2Q7Z7J5 298 aa13.48□□□□□ -0.25
HMGA1-206ENST00000478214 OR2T29Q8NH02 315 aa13.48□□□□□ -0.25
HMGA1-206ENST00000478214 GNPDA2Q8TDQ7 276 aa13.48□□□□□ -0.25
HMGA1-206ENST00000478214 POP5Q969H6 163 aaKnown RBP13.48□□□□□ -0.25
HMGA1-206ENST00000478214 TRIM15Q9C019 465 aa13.48□□□□□ -0.25
HMGA1-206ENST00000478214 OR52D1Q9H346 318 aa13.48□□□□□ -0.25
HMGA1-206ENST00000478214 FBXL3Q9UKT7 428 aa13.48□□□□□ -0.25
HMGA1-206ENST00000478214 A0A1W2PPL8 197 aa13.47□□□□□ -0.25
HMGA1-206ENST00000478214 AQP12BA6NM10 295 aa13.47□□□□□ -0.25
HMGA1-206ENST00000478214 SOCS2O14508 198 aa13.47□□□□□ -0.25
HMGA1-206ENST00000478214 AHCYL1O43865 530 aa13.47□□□□□ -0.25
HMGA1-206ENST00000478214 MGRN1O60291 552 aa13.47□□□□□ -0.25
HMGA1-206ENST00000478214 DNAJC8O75937 253 aaPredicted RBP13.47□□□□□ -0.25
HMGA1-206ENST00000478214 TXNDC12O95881 172 aa13.47□□□□□ -0.25
HMGA1-206ENST00000478214 RAP2AP10114 183 aa13.47□□□□□ -0.25
HMGA1-206ENST00000478214 CTLA4P16410 223 aa13.47□□□□□ -0.25
HMGA1-206ENST00000478214 NR4A1P22736 598 aa13.47□□□□□ -0.25
HMGA1-206ENST00000478214 LAP3P28838 519 aa13.47□□□□□ -0.25
HMGA1-206ENST00000478214 TSPAN31Q12999 210 aa13.47□□□□□ -0.25
HMGA1-206ENST00000478214 ETFDHQ16134 617 aa13.47□□□□□ -0.25
HMGA1-206ENST00000478214 FAM27BQ5VT28 67 aa13.47□□□□□ -0.25
HMGA1-206ENST00000478214 ZNF770Q6IQ21 691 aaPredicted RBP13.47□□□□□ -0.25
HMGA1-206ENST00000478214 FOXL2NBQ6ZUU3 175 aa13.47□□□□□ -0.25
HMGA1-206ENST00000478214 PTCHD4Q6ZW05 846 aa13.47□□□□□ -0.25
HMGA1-206ENST00000478214 AQP12AQ8IXF9 295 aa13.47□□□□□ -0.25
HMGA1-206ENST00000478214 CIARTQ8N365 385 aaPredicted RBP13.47□□□□□ -0.25
HMGA1-206ENST00000478214 CANT1Q8WVQ1 401 aa13.47□□□□□ -0.25
HMGA1-206ENST00000478214 SAMD8Q96LT4 415 aa13.47□□□□□ -0.25
HMGA1-206ENST00000478214 ERMAPQ96PL5 475 aaPredicted RBP13.47□□□□□ -0.25
HMGA1-206ENST00000478214 CHID1Q9BWS9 393 aa13.47□□□□□ -0.25
HMGA1-206ENST00000478214 CADM1Q9BY67 442 aaKnown RBP13.47□□□□□ -0.25
HMGA1-206ENST00000478214 KCNN2Q9H2S1 579 aa13.47□□□□□ -0.25
HMGA1-206ENST00000478214 ZNF442Q9H7R0 627 aa13.47□□□□□ -0.25
HMGA1-206ENST00000478214 SAMHD1Q9Y3Z3 626 aaKnown RBP13.47□□□□□ -0.25
HMGA1-206ENST00000478214 U3KQV3 271 aa13.47□□□□□ -0.25
HMGA1-206ENST00000478214 DHRS12A0PJE2 317 aa13.46□□□□□ -0.25
HMGA1-206ENST00000478214 B9A039 149 aa13.46□□□□□ -0.25
HMGA1-206ENST00000478214 H7C1Q1 480 aa13.46□□□□□ -0.25
HMGA1-206ENST00000478214 H7C417 338 aa13.46□□□□□ -0.25
HMGA1-206ENST00000478214 GSC2O15499 205 aa13.46□□□□□ -0.25
HMGA1-206ENST00000478214 GPRIN2O60269 458 aa13.46□□□□□ -0.25
HMGA1-206ENST00000478214 CCNB2O95067 398 aa13.46□□□□□ -0.25
HMGA1-206ENST00000478214 GASTP01350 101 aa13.46□□□□□ -0.25
HMGA1-206ENST00000478214 SCG5P05408 212 aa13.46□□□□□ -0.25
HMGA1-206ENST00000478214 BMP4P12644 408 aa13.46□□□□□ -0.25
HMGA1-206ENST00000478214 CCL2P13500 99 aa13.46□□□□□ -0.25
HMGA1-206ENST00000478214 APEHP13798 732 aaKnown RBP13.46□□□□□ -0.25
HMGA1-206ENST00000478214 FOSL1P15407 271 aa13.46□□□□□ -0.25
HMGA1-206ENST00000478214 ZNF32P17041 273 aa13.46□□□□□ -0.25
HMGA1-206ENST00000478214 SLC6A6P31641 620 aa13.46□□□□□ -0.25
HMGA1-206ENST00000478214 CDKN2AP42771 156 aaKnown RBP13.46□□□□□ -0.25
HMGA1-206ENST00000478214 RPS6KA3P51812 740 aa13.46□□□□□ -0.25
HMGA1-206ENST00000478214 PLP2Q04941 152 aa13.46□□□□□ -0.25
HMGA1-206ENST00000478214 FLOT2Q14254 428 aa13.46□□□□□ -0.25
HMGA1-206ENST00000478214 RAB35Q15286 201 aa13.46□□□□□ -0.25
HMGA1-206ENST00000478214 MSMPQ1L6U9 139 aa13.46□□□□□ -0.25
HMGA1-206ENST00000478214 CLEC12BQ2HXU8 276 aa13.46□□□□□ -0.25
HMGA1-206ENST00000478214 PABPC1L2AQ5JQF8 200 aa13.46□□□□□ -0.25
HMGA1-206ENST00000478214 ZNF620Q6ZNG0 422 aa13.46□□□□□ -0.25
HMGA1-206ENST00000478214 ADCK1Q86TW2 530 aa13.46□□□□□ -0.25
HMGA1-206ENST00000478214 SPATA24Q86W54 205 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms