RNA–Protein interactions for RNA: ENST00000477085.1

COL4A6-206, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-206ENST00000477085 DCBLD2Q96PD2 775 aa12.82□□□□□ -0.36
COL4A6-206ENST00000477085 TAAR6Q96RI8 345 aa12.82□□□□□ -0.36
COL4A6-206ENST00000477085 DKK4Q9UBT3 224 aa12.82□□□□□ -0.36
COL4A6-206ENST00000477085 ST6GALNAC2Q9UJ37 374 aa12.82□□□□□ -0.36
COL4A6-206ENST00000477085 A0A087WV48 116 aa12.81□□□□□ -0.36
COL4A6-206ENST00000477085 K7ENP7 123 aa12.81□□□□□ -0.36
COL4A6-206ENST00000477085 DVL2O14641 736 aa12.81□□□□□ -0.36
COL4A6-206ENST00000477085 ABHD16AO95870 558 aa12.81□□□□□ -0.36
COL4A6-206ENST00000477085 ACTL6AO96019 429 aa12.81□□□□□ -0.36
COL4A6-206ENST00000477085 QDPRP09417 244 aa12.81□□□□□ -0.36
COL4A6-206ENST00000477085 PSMA1P25786 263 aaKnown RBP12.81□□□□□ -0.36
COL4A6-206ENST00000477085 CDAP32320 146 aa12.81□□□□□ -0.36
COL4A6-206ENST00000477085 PSMB10P40306 273 aa12.81□□□□□ -0.36
COL4A6-206ENST00000477085 ADAM8P78325 824 aa12.81□□□□□ -0.36
COL4A6-206ENST00000477085 PCK2Q16822 640 aa12.81□□□□□ -0.36
COL4A6-206ENST00000477085 INO80CQ6PI98 192 aaPredicted RBP12.81□□□□□ -0.36
COL4A6-206ENST00000477085 CD200R1LQ6Q8B3 271 aa12.81□□□□□ -0.36
COL4A6-206ENST00000477085 FCRLAQ7L513 359 aa12.81□□□□□ -0.36
COL4A6-206ENST00000477085 ZADH2Q8N4Q0 377 aa12.81□□□□□ -0.36
COL4A6-206ENST00000477085 RBMXL3Q8N7X1 1067 aaKnown RBP12.81□□□□□ -0.36
COL4A6-206ENST00000477085 DYNC2LI1Q8TCX1 351 aa12.81□□□□□ -0.36
COL4A6-206ENST00000477085 ZFAND2BQ8WV99 257 aa12.81□□□□□ -0.36
COL4A6-206ENST00000477085 C11orf40Q8WZ69 217 aa12.81□□□□□ -0.36
COL4A6-206ENST00000477085 WDYHV1Q96HA8 205 aa12.81□□□□□ -0.36
COL4A6-206ENST00000477085 GLTPQ9NZD2 209 aa12.81□□□□□ -0.36
COL4A6-206ENST00000477085 KLHL9Q9P2J3 617 aa12.81□□□□□ -0.36
COL4A6-206ENST00000477085 LAMP5Q9UJQ1 280 aa12.81□□□□□ -0.36
COL4A6-206ENST00000477085 FOXD3Q9UJU5 478 aaPredicted RBP12.81□□□□□ -0.36
COL4A6-206ENST00000477085 GNG8Q9UK08 70 aa12.81□□□□□ -0.36
COL4A6-206ENST00000477085 STUB1Q9UNE7 303 aa12.81□□□□□ -0.36
COL4A6-206ENST00000477085 UGT2A1Q9Y4X1 527 aa12.81□□□□□ -0.36
COL4A6-206ENST00000477085 PMF1-BGLAPU3KQ54 211 aa12.81□□□□□ -0.36
COL4A6-206ENST00000477085 KIAA1549Q9HCM3 1950 aa12.81□□□□□ -0.36
COL4A6-206ENST00000477085 UPK3AO75631 287 aa12.81□□□□□ -0.36
COL4A6-206ENST00000477085 AQP8O94778 261 aa12.81□□□□□ -0.36
COL4A6-206ENST00000477085 IGHG3P01860 377 aa12.81□□□□□ -0.36
COL4A6-206ENST00000477085 SPARCP09486 303 aa12.81□□□□□ -0.36
COL4A6-206ENST00000477085 OR8G3PP0DMU2 310 aa12.81□□□□□ -0.36
COL4A6-206ENST00000477085 GABRA5P31644 462 aa12.81□□□□□ -0.36
COL4A6-206ENST00000477085 ENTPD1P49961 510 aa12.81□□□□□ -0.36
COL4A6-206ENST00000477085 BLVRAP53004 296 aa12.81□□□□□ -0.36
COL4A6-206ENST00000477085 SH3BGRP55822 239 aaPredicted RBP12.81□□□□□ -0.36
COL4A6-206ENST00000477085 ACTA2P62736 377 aa12.81□□□□□ -0.36
COL4A6-206ENST00000477085 ACTG2P63267 376 aa12.81□□□□□ -0.36
COL4A6-206ENST00000477085 DMKNQ6E0U4 476 aaPredicted RBP12.81□□□□□ -0.36
COL4A6-206ENST00000477085 DNM1P34Q6PK57 102 aa12.81□□□□□ -0.36
COL4A6-206ENST00000477085 Q6ZS92 163 aa12.81□□□□□ -0.36
COL4A6-206ENST00000477085 GLB1L2Q8IW92 636 aa12.81□□□□□ -0.36
COL4A6-206ENST00000477085 THEM6Q8WUY1 208 aa12.81□□□□□ -0.36
COL4A6-206ENST00000477085 ZNF837Q96EG3 531 aaPredicted RBP12.81□□□□□ -0.36
COL4A6-206ENST00000477085 PGLYRP3Q96LB9 341 aa12.81□□□□□ -0.36
COL4A6-206ENST00000477085 TMED9Q9BVK6 235 aa12.81□□□□□ -0.36
COL4A6-206ENST00000477085 LDAHQ9H6V9 325 aa12.81□□□□□ -0.36
COL4A6-206ENST00000477085 TRIM36Q9NQ86 728 aa12.81□□□□□ -0.36
COL4A6-206ENST00000477085 TIGARQ9NQ88 270 aa12.81□□□□□ -0.36
COL4A6-206ENST00000477085 SLCO1C1Q9NYB5 712 aa12.81□□□□□ -0.36
COL4A6-206ENST00000477085 ANKRD11Q6UB99 2663 aaPredicted RBP12.8□□□□□ -0.36
COL4A6-206ENST00000477085 BSNQ9UPA5 3926 aa12.8□□□□□ -0.36
COL4A6-206ENST00000477085 OGG1O15527 345 aa12.8□□□□□ -0.36
COL4A6-206ENST00000477085 PLPP2O43688 288 aa12.8□□□□□ -0.36
COL4A6-206ENST00000477085 CPN1P15169 458 aa12.8□□□□□ -0.36
COL4A6-206ENST00000477085 ZNF24P17028 368 aa12.8□□□□□ -0.36
COL4A6-206ENST00000477085 EDNRAP25101 427 aa12.8□□□□□ -0.36
COL4A6-206ENST00000477085 LAP3P28838 519 aa12.8□□□□□ -0.36
COL4A6-206ENST00000477085 ZNF133P52736 654 aaPredicted RBP12.8□□□□□ -0.36
COL4A6-206ENST00000477085 NANOS3P60323 173 aaKnown RBP12.8□□□□□ -0.36
COL4A6-206ENST00000477085 RASGEF1BQ0VAM2 473 aa12.8□□□□□ -0.36
COL4A6-206ENST00000477085 ZNF169Q14929 603 aaPredicted RBP12.8□□□□□ -0.36
COL4A6-206ENST00000477085 PDSS1Q5T2R2 415 aa12.8□□□□□ -0.36
COL4A6-206ENST00000477085 TMEM91Q6ZNR0 172 aa12.8□□□□□ -0.36
COL4A6-206ENST00000477085 C20orf196Q8IYI0 205 aa12.8□□□□□ -0.36
COL4A6-206ENST00000477085 MEIOBQ8N635 442 aa12.8□□□□□ -0.36
COL4A6-206ENST00000477085 FNDC9Q8TBE3 224 aa12.8□□□□□ -0.36
COL4A6-206ENST00000477085 RNF128Q8TEB7 428 aa12.8□□□□□ -0.36
COL4A6-206ENST00000477085 HSD17B8Q92506 261 aa12.8□□□□□ -0.36
COL4A6-206ENST00000477085 HDHD5Q9BXW7 423 aa12.8□□□□□ -0.36
COL4A6-206ENST00000477085 TXNL4BQ9NX01 149 aaKnown RBP12.8□□□□□ -0.36
COL4A6-206ENST00000477085 ATMQ13315 3056 aa12.8□□□□□ -0.36
COL4A6-206ENST00000477085 CENPBD1B2RD01 187 aa12.79□□□□□ -0.36
COL4A6-206ENST00000477085 TFECO14948 347 aaPredicted RBP12.79□□□□□ -0.36
COL4A6-206ENST00000477085 HRGP04196 525 aa12.79□□□□□ -0.36
COL4A6-206ENST00000477085 UGT2B10P36537 528 aa12.79□□□□□ -0.36
COL4A6-206ENST00000477085 CSNK1A1P48729 337 aa12.79□□□□□ -0.36
COL4A6-206ENST00000477085 SIRPAP78324 504 aa12.79□□□□□ -0.36
COL4A6-206ENST00000477085 SLC3A1Q07837 685 aa12.79□□□□□ -0.36
COL4A6-206ENST00000477085 GPR50Q13585 617 aa12.79□□□□□ -0.36
COL4A6-206ENST00000477085 TEX30Q5JUR7 227 aa12.79□□□□□ -0.36
COL4A6-206ENST00000477085 LIPNQ5VXI9 398 aa12.79□□□□□ -0.36
COL4A6-206ENST00000477085 CORO6Q6QEF8 472 aa12.79□□□□□ -0.36
COL4A6-206ENST00000477085 ARL9Q6T311 187 aa12.79□□□□□ -0.36
COL4A6-206ENST00000477085 HDDC2Q7Z4H3 204 aa12.79□□□□□ -0.36
COL4A6-206ENST00000477085 LINC00346Q8IVM7 164 aa12.79□□□□□ -0.36
COL4A6-206ENST00000477085 SIAH3Q8IW03 269 aa12.79□□□□□ -0.36
COL4A6-206ENST00000477085 MNTQ99583 582 aa12.79□□□□□ -0.36
COL4A6-206ENST00000477085 ABHD6Q9BV23 337 aa12.79□□□□□ -0.36
COL4A6-206ENST00000477085 DCSTAMPQ9H295 470 aa12.79□□□□□ -0.36
COL4A6-206ENST00000477085 RAXQ9Y2V3 346 aa12.79□□□□□ -0.36
COL4A6-206ENST00000477085 ZNF407Q9C0G0 2248 aa12.79□□□□□ -0.36
COL4A6-206ENST00000477085 PRRC2CQ9Y520 2896 aaKnown RBP12.79□□□□□ -0.36
COL4A6-206ENST00000477085 IGKV3D-15A0A087WSY6 115 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms