RNA–Protein interactions for RNA: ENST00000476625.5

HDAC6-219, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-219ENST00000476625 TMEM43Q9BTV4 400 aa10.09□□□□□ -0.79
HDAC6-219ENST00000476625 TMEM109Q9BVC6 243 aa10.09□□□□□ -0.79
HDAC6-219ENST00000476625 RAD21L1Q9H4I0 556 aa10.09□□□□□ -0.79
HDAC6-219ENST00000476625 DENND2DQ9H6A0 471 aaPredicted RBP10.09□□□□□ -0.79
HDAC6-219ENST00000476625 NTN4Q9HB63 628 aa10.09□□□□□ -0.79
HDAC6-219ENST00000476625 SELENONQ9NZV5 590 aa10.09□□□□□ -0.79
HDAC6-219ENST00000476625 ANGPT4Q9Y264 503 aa10.09□□□□□ -0.79
HDAC6-219ENST00000476625 UGT2A1Q9Y4X1 527 aa10.09□□□□□ -0.79
HDAC6-219ENST00000476625 IQCMA0A1B0GVH7 501 aa10.08□□□□□ -0.8
HDAC6-219ENST00000476625 SLC22A23A1A5C7 686 aa10.08□□□□□ -0.8
HDAC6-219ENST00000476625 C5orf49A4QMS7 147 aa10.08□□□□□ -0.8
HDAC6-219ENST00000476625 TRPC5OSA6NMA1 111 aa10.08□□□□□ -0.8
HDAC6-219ENST00000476625 UBDO15205 165 aa10.08□□□□□ -0.8
HDAC6-219ENST00000476625 FARS2O95363 451 aaKnown RBP10.08□□□□□ -0.8
HDAC6-219ENST00000476625 RNASE1P07998 156 aaKnown RBP10.08□□□□□ -0.8
HDAC6-219ENST00000476625 THRBP10828 461 aa10.08□□□□□ -0.8
HDAC6-219ENST00000476625 UMPSP11172 480 aa10.08□□□□□ -0.8
HDAC6-219ENST00000476625 ZNF12P17014 697 aa10.08□□□□□ -0.8
HDAC6-219ENST00000476625 STOMP27105 288 aa10.08□□□□□ -0.8
HDAC6-219ENST00000476625 APLNRP35414 380 aa10.08□□□□□ -0.8
HDAC6-219ENST00000476625 CLRN1P58418 232 aa10.08□□□□□ -0.8
HDAC6-219ENST00000476625 SELENOVP59797 346 aa10.08□□□□□ -0.8
HDAC6-219ENST00000476625 KRTAP10-3P60369 221 aa10.08□□□□□ -0.8
HDAC6-219ENST00000476625 HSF2Q03933 536 aa10.08□□□□□ -0.8
HDAC6-219ENST00000476625 DUSP7Q16829 419 aa10.08□□□□□ -0.8
HDAC6-219ENST00000476625 SLC36A2Q495M3 483 aa10.08□□□□□ -0.8
HDAC6-219ENST00000476625 TNFAIP8L3Q5GJ75 292 aa10.08□□□□□ -0.8
HDAC6-219ENST00000476625 HHATQ5VTY9 493 aa10.08□□□□□ -0.8
HDAC6-219ENST00000476625 OTPQ5XKR4 325 aa10.08□□□□□ -0.8
HDAC6-219ENST00000476625 RBMS3Q6XE24 437 aaKnown RBP10.08□□□□□ -0.8
HDAC6-219ENST00000476625 SNX32Q86XE0 403 aa10.08□□□□□ -0.8
HDAC6-219ENST00000476625 C1QL4Q86Z23 238 aa10.08□□□□□ -0.8
HDAC6-219ENST00000476625 ARMC8Q8IUR7 673 aa10.08□□□□□ -0.8
HDAC6-219ENST00000476625 TEX29Q8N6K0 151 aa10.08□□□□□ -0.8
HDAC6-219ENST00000476625 NOXO1Q8NFA2 376 aa10.08□□□□□ -0.8
HDAC6-219ENST00000476625 MOSPD2Q8NHP6 518 aa10.08□□□□□ -0.8
HDAC6-219ENST00000476625 PFN4Q8NHR9 129 aa10.08□□□□□ -0.8
HDAC6-219ENST00000476625 ABHD4Q8TB40 342 aa10.08□□□□□ -0.8
HDAC6-219ENST00000476625 KLF14Q8TD94 323 aaPredicted RBP10.08□□□□□ -0.8
HDAC6-219ENST00000476625 ST7LQ8TDW4 575 aa10.08□□□□□ -0.8
HDAC6-219ENST00000476625 NSMAFQ92636 917 aa10.08□□□□□ -0.8
HDAC6-219ENST00000476625 POM121L2Q96KW2 1035 aa10.08□□□□□ -0.8
HDAC6-219ENST00000476625 BCL2L14Q9BZR8 327 aa10.08□□□□□ -0.8
HDAC6-219ENST00000476625 SSU72Q9NP77 194 aaKnown RBP10.08□□□□□ -0.8
HDAC6-219ENST00000476625 MEPEQ9NQ76 525 aaPredicted RBP10.08□□□□□ -0.8
HDAC6-219ENST00000476625 THUMPD1Q9NXG2 353 aaKnown RBP10.08□□□□□ -0.8
HDAC6-219ENST00000476625 PLEK2Q9NYT0 353 aa10.08□□□□□ -0.8
HDAC6-219ENST00000476625 GPR160Q9UJ42 338 aa10.08□□□□□ -0.8
HDAC6-219ENST00000476625 PRDM4Q9UKN5 801 aa10.08□□□□□ -0.8
HDAC6-219ENST00000476625 FBXL3Q9UKT7 428 aa10.08□□□□□ -0.8
HDAC6-219ENST00000476625 SLC7A7Q9UM01 511 aa10.08□□□□□ -0.8
HDAC6-219ENST00000476625 INSIG2Q9Y5U4 225 aa10.08□□□□□ -0.8
HDAC6-219ENST00000476625 NPTNQ9Y639 398 aa10.08□□□□□ -0.8
HDAC6-219ENST00000476625 AUP1Q9Y679 476 aa10.08□□□□□ -0.8
HDAC6-219ENST00000476625 TRBV5-3A0A0A0MS03 114 aa10.07□□□□□ -0.8
HDAC6-219ENST00000476625 IGHV3-64DA0A0J9YX35 117 aa10.07□□□□□ -0.8
HDAC6-219ENST00000476625 BLOC1S5-TXNDC5H3BN57 136 aa10.07□□□□□ -0.8
HDAC6-219ENST00000476625 CHP2O43745 196 aa10.07□□□□□ -0.8
HDAC6-219ENST00000476625 TRMUO75648 421 aaKnown RBP10.07□□□□□ -0.8
HDAC6-219ENST00000476625 IGHMP01871 453 aa10.07□□□□□ -0.8
HDAC6-219ENST00000476625 ASAH2BP0C7U1 165 aa10.07□□□□□ -0.8
HDAC6-219ENST00000476625 ATP4BP51164 291 aa10.07□□□□□ -0.8
HDAC6-219ENST00000476625 PSG4Q00888 419 aa10.07□□□□□ -0.8
HDAC6-219ENST00000476625 RPL18Q07020 188 aaKnown RBP10.07□□□□□ -0.8
HDAC6-219ENST00000476625 ZMYND11Q15326 602 aa10.07□□□□□ -0.8
HDAC6-219ENST00000476625 HIST3H3Q16695 136 aa10.07□□□□□ -0.8
HDAC6-219ENST00000476625 LRIF1Q5T3J3 769 aa10.07□□□□□ -0.8
HDAC6-219ENST00000476625 Q6ZR03 302 aa10.07□□□□□ -0.8
HDAC6-219ENST00000476625 MSANTD1Q6ZTZ1 278 aa10.07□□□□□ -0.8
HDAC6-219ENST00000476625 SPATC1Q76KD6 591 aa10.07□□□□□ -0.8
HDAC6-219ENST00000476625 RANBP3LQ86VV4 465 aaPredicted RBP10.07□□□□□ -0.8
HDAC6-219ENST00000476625 PTOV1Q86YD1 416 aa10.07□□□□□ -0.8
HDAC6-219ENST00000476625 KIR3DL3Q8N743 410 aa10.07□□□□□ -0.8
HDAC6-219ENST00000476625 ASB10Q8WXI3 467 aa10.07□□□□□ -0.8
HDAC6-219ENST00000476625 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.07□□□□□ -0.8
HDAC6-219ENST00000476625 HDAC2Q92769 488 aaKnown RBP10.07□□□□□ -0.8
HDAC6-219ENST00000476625 POP5Q969H6 163 aaKnown RBP10.07□□□□□ -0.8
HDAC6-219ENST00000476625 SIGLEC11Q96RL6 698 aa10.07□□□□□ -0.8
HDAC6-219ENST00000476625 PRSS27Q9BQR3 290 aa10.07□□□□□ -0.8
HDAC6-219ENST00000476625 EBF4Q9BQW3 602 aa10.07□□□□□ -0.8
HDAC6-219ENST00000476625 CPPED1Q9BRF8 314 aaPredicted RBP10.07□□□□□ -0.8
HDAC6-219ENST00000476625 WNT5BQ9H1J7 359 aa10.07□□□□□ -0.8
HDAC6-219ENST00000476625 NANSQ9NR45 359 aa10.07□□□□□ -0.8
HDAC6-219ENST00000476625 THAP1Q9NVV9 213 aa10.07□□□□□ -0.8
HDAC6-219ENST00000476625 VWFP04275 2813 aa10.07□□□□□ -0.8
HDAC6-219ENST00000476625 TRAV40A0A0B4J280 105 aa10.06□□□□□ -0.8
HDAC6-219ENST00000476625 TMEM120BA0PK00 339 aa10.06□□□□□ -0.8
HDAC6-219ENST00000476625 SHOX2O60902 331 aaPredicted RBP10.06□□□□□ -0.8
HDAC6-219ENST00000476625 FOXH1O75593 365 aa10.06□□□□□ -0.8
HDAC6-219ENST00000476625 MT-ATP6P00846 226 aa10.06□□□□□ -0.8
HDAC6-219ENST00000476625 IGHG1P01857 330 aa10.06□□□□□ -0.8
HDAC6-219ENST00000476625 SCG5P05408 212 aa10.06□□□□□ -0.8
HDAC6-219ENST00000476625 TNFRSF1BP20333 461 aa10.06□□□□□ -0.8
HDAC6-219ENST00000476625 FUT4P22083 530 aa10.06□□□□□ -0.8
HDAC6-219ENST00000476625 GATA3P23771 443 aa10.06□□□□□ -0.8
HDAC6-219ENST00000476625 GCH1P30793 250 aa10.06□□□□□ -0.8
HDAC6-219ENST00000476625 CD80P33681 288 aa10.06□□□□□ -0.8
HDAC6-219ENST00000476625 AQP2P41181 271 aa10.06□□□□□ -0.8
HDAC6-219ENST00000476625 SLC6A9P48067 706 aa10.06□□□□□ -0.8
HDAC6-219ENST00000476625 UGT2B15P54855 530 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms