RNA–Protein interactions for RNA: ENST00000475375.1

VPS36-203, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-203ENST00000475375 TRIM33Q9UPN9 1127 aa17.31■□□□□ 0.36
VPS36-203ENST00000475375 C5orf49A4QMS7 147 aa17.3■□□□□ 0.36
VPS36-203ENST00000475375 ZSCAN5BA6NJL1 495 aa17.3■□□□□ 0.36
VPS36-203ENST00000475375 CPSF4LA6NMK7 179 aaKnown RBP17.3■□□□□ 0.36
VPS36-203ENST00000475375 MCIDASD6RGH6 385 aa17.3■□□□□ 0.36
VPS36-203ENST00000475375 CHP2O43745 196 aa17.3■□□□□ 0.36
VPS36-203ENST00000475375 SNNO75324 88 aaPredicted RBP17.3■□□□□ 0.36
VPS36-203ENST00000475375 RNASE1P07998 156 aaKnown RBP17.3■□□□□ 0.36
VPS36-203ENST00000475375 HOXB9P17482 250 aaPredicted RBP17.3■□□□□ 0.36
VPS36-203ENST00000475375 PPIBP23284 216 aaKnown RBP17.3■□□□□ 0.36
VPS36-203ENST00000475375 ZNF154Q13106 437 aa17.3■□□□□ 0.36
VPS36-203ENST00000475375 NRN1LQ496H8 165 aa17.3■□□□□ 0.36
VPS36-203ENST00000475375 ZNF613Q6PF04 617 aa17.3■□□□□ 0.36
VPS36-203ENST00000475375 TTC33Q6PID6 262 aaPredicted RBP17.3■□□□□ 0.36
VPS36-203ENST00000475375 UNQ6126/PRO20091Q6UXV3 157 aa17.3■□□□□ 0.36
VPS36-203ENST00000475375 ZNF101Q8IZC7 436 aa17.3■□□□□ 0.36
VPS36-203ENST00000475375 SYT14Q8NB59 555 aa17.3■□□□□ 0.36
VPS36-203ENST00000475375 TAF15Q92804 592 aaKnown RBP eCLIP17.3■□□□□ 0.36
VPS36-203ENST00000475375 MS4A7Q9GZW8 240 aaPredicted RBP17.3■□□□□ 0.36
VPS36-203ENST00000475375 EVA1AQ9H8M9 152 aa17.3■□□□□ 0.36
VPS36-203ENST00000475375 CYSLTR2Q9NS75 346 aa17.3■□□□□ 0.36
VPS36-203ENST00000475375 NPTNQ9Y639 398 aa17.3■□□□□ 0.36
VPS36-203ENST00000475375 IGHMP01871 453 aa17.29■□□□□ 0.36
VPS36-203ENST00000475375 MMP7P09237 267 aaPredicted RBP17.29■□□□□ 0.36
VPS36-203ENST00000475375 STX1BP61266 288 aa17.29■□□□□ 0.36
VPS36-203ENST00000475375 HNRNPA0Q13151 305 aaKnown RBP17.29■□□□□ 0.36
VPS36-203ENST00000475375 KLF17Q5JT82 389 aaPredicted RBP17.29■□□□□ 0.36
VPS36-203ENST00000475375 MAVSQ7Z434 540 aa17.29■□□□□ 0.36
VPS36-203ENST00000475375 NANOGNBQ7Z5D8 188 aa17.29■□□□□ 0.36
VPS36-203ENST00000475375 MSRB3Q8IXL7 192 aa17.29■□□□□ 0.36
VPS36-203ENST00000475375 KLHL36Q8N4N3 616 aa17.29■□□□□ 0.36
VPS36-203ENST00000475375 NOXO1Q8NFA2 376 aa17.29■□□□□ 0.36
VPS36-203ENST00000475375 SLC25A40Q8TBP6 338 aa17.29■□□□□ 0.36
VPS36-203ENST00000475375 KLF14Q8TD94 323 aaPredicted RBP17.29■□□□□ 0.36
VPS36-203ENST00000475375 MARS2Q96GW9 593 aaKnown RBP17.29■□□□□ 0.36
VPS36-203ENST00000475375 ZNF48Q96MX3 618 aaPredicted RBP17.29■□□□□ 0.36
VPS36-203ENST00000475375 OR2J1Q9GZK6 312 aa17.29■□□□□ 0.36
VPS36-203ENST00000475375 NPHS2Q9NP85 383 aa17.29■□□□□ 0.36
VPS36-203ENST00000475375 SLCO1B3Q9NPD5 702 aa17.29■□□□□ 0.36
VPS36-203ENST00000475375 SLAMF8Q9P0V8 285 aa17.29■□□□□ 0.36
VPS36-203ENST00000475375 EGFL7Q9UHF1 273 aa17.29■□□□□ 0.36
VPS36-203ENST00000475375 VWFP04275 2813 aa17.29■□□□□ 0.36
VPS36-203ENST00000475375 A0A0G2JK05 382 aa17.28■□□□□ 0.36
VPS36-203ENST00000475375 BLOC1S5-TXNDC5H3BN57 136 aa17.28■□□□□ 0.36
VPS36-203ENST00000475375 FMO6PO60774 539 aa17.28■□□□□ 0.36
VPS36-203ENST00000475375 WNT5AP41221 380 aa17.28■□□□□ 0.36
VPS36-203ENST00000475375 GDI2P50395 445 aaKnown RBP17.28■□□□□ 0.36
VPS36-203ENST00000475375 ZMAT1Q5H9K5 638 aa17.28■□□□□ 0.36
VPS36-203ENST00000475375 LEG1Q6P5S2 330 aa17.28■□□□□ 0.36
VPS36-203ENST00000475375 LINC00114Q6XXX2 140 aa17.28■□□□□ 0.36
VPS36-203ENST00000475375 SPICQ8N5J4 248 aa17.28■□□□□ 0.36
VPS36-203ENST00000475375 ABHD4Q8TB40 342 aa17.28■□□□□ 0.36
VPS36-203ENST00000475375 TMEM38AQ9H6F2 299 aa17.28■□□□□ 0.36
VPS36-203ENST00000475375 DCAF16Q9NXF7 216 aa17.28■□□□□ 0.36
VPS36-203ENST00000475375 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.28■□□□□ 0.36
VPS36-203ENST00000475375 ZNF229Q9UJW7 825 aa17.28■□□□□ 0.36
VPS36-203ENST00000475375 ZDHHC8Q9ULC8 765 aa17.28■□□□□ 0.36
VPS36-203ENST00000475375 ANGPT4Q9Y264 503 aa17.28■□□□□ 0.36
VPS36-203ENST00000475375 IGHV3OR16-10A0A075B7F0 116 aa17.27■□□□□ 0.36
VPS36-203ENST00000475375 A0A1W2PRG6 482 aa17.27■□□□□ 0.36
VPS36-203ENST00000475375 TRAPPC2LH3BP13 241 aa17.27■□□□□ 0.36
VPS36-203ENST00000475375 IGHV2-70P01814 119 aa17.27■□□□□ 0.36
VPS36-203ENST00000475375 F13BP05160 661 aa17.27■□□□□ 0.36
VPS36-203ENST00000475375 ZNF12P17014 697 aa17.27■□□□□ 0.36
VPS36-203ENST00000475375 ZNF32P17041 273 aa17.27■□□□□ 0.36
VPS36-203ENST00000475375 MDKP21741 143 aaPredicted RBP17.27■□□□□ 0.36
VPS36-203ENST00000475375 CDAP32320 146 aa17.27■□□□□ 0.36
VPS36-203ENST00000475375 PCGF2P35227 344 aa17.27■□□□□ 0.36
VPS36-203ENST00000475375 LIPAP38571 399 aa17.27■□□□□ 0.36
VPS36-203ENST00000475375 WDR4P57081 412 aaKnown RBP17.27■□□□□ 0.36
VPS36-203ENST00000475375 PPP1CBP62140 327 aa17.27■□□□□ 0.36
VPS36-203ENST00000475375 TNFAIP6P98066 277 aaPredicted RBP17.27■□□□□ 0.36
VPS36-203ENST00000475375 SLC9A3R2Q15599 337 aa17.27■□□□□ 0.36
VPS36-203ENST00000475375 TUSC1Q2TAM9 212 aa17.27■□□□□ 0.36
VPS36-203ENST00000475375 SPRNQ5BIV9 151 aa17.27■□□□□ 0.36
VPS36-203ENST00000475375 TMEM255AQ5JRV8 349 aa17.27■□□□□ 0.36
VPS36-203ENST00000475375 ENTPD8Q5MY95 495 aa17.27■□□□□ 0.36
VPS36-203ENST00000475375 LRIF1Q5T3J3 769 aa17.27■□□□□ 0.36
VPS36-203ENST00000475375 MBNL2Q5VZF2 373 aaKnown RBP17.27■□□□□ 0.36
VPS36-203ENST00000475375 AKR7LQ8NHP1 331 aa17.27■□□□□ 0.36
VPS36-203ENST00000475375 VANGL1Q8TAA9 524 aaPredicted RBP17.27■□□□□ 0.36
VPS36-203ENST00000475375 POM121L2Q96KW2 1035 aa17.27■□□□□ 0.36
VPS36-203ENST00000475375 DIRC2Q96SL1 478 aa17.27■□□□□ 0.36
VPS36-203ENST00000475375 SLITRK2Q9H156 845 aa17.27■□□□□ 0.36
VPS36-203ENST00000475375 SIAEQ9HAT2 523 aa17.27■□□□□ 0.36
VPS36-203ENST00000475375 MSL2Q9HCI7 577 aa17.27■□□□□ 0.36
VPS36-203ENST00000475375 SLC7A7Q9UM01 511 aa17.27■□□□□ 0.36
VPS36-203ENST00000475375 CORO2BQ9UQ03 480 aa17.27■□□□□ 0.36
VPS36-203ENST00000475375 INSIG2Q9Y5U4 225 aa17.27■□□□□ 0.36
VPS36-203ENST00000475375 EVPLLA8MZ36 301 aa17.26■□□□□ 0.35
VPS36-203ENST00000475375 GPANK1O95872 356 aa17.26■□□□□ 0.35
VPS36-203ENST00000475375 OPN1SWP03999 348 aa17.26■□□□□ 0.35
VPS36-203ENST00000475375 MTNR1AP48039 350 aa17.26■□□□□ 0.35
VPS36-203ENST00000475375 SEC61A1P61619 476 aaKnown RBP17.26■□□□□ 0.35
VPS36-203ENST00000475375 SGCAQ16586 387 aa17.26■□□□□ 0.35
VPS36-203ENST00000475375 HIST3H3Q16695 136 aa17.26■□□□□ 0.35
VPS36-203ENST00000475375 SPATC1Q76KD6 591 aa17.26■□□□□ 0.35
VPS36-203ENST00000475375 HDDC2Q7Z4H3 204 aa17.26■□□□□ 0.35
VPS36-203ENST00000475375 MREGQ8N565 214 aa17.26■□□□□ 0.35
VPS36-203ENST00000475375 OR6T1Q8NGN1 323 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms