RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 PGA4P0DJD7 388 aa11.89□□□□□ -0.51
CCDC78-209ENST00000474647 PGA3P0DJD8 388 aa11.89□□□□□ -0.51
CCDC78-209ENST00000474647 MAKP20794 623 aa11.89□□□□□ -0.51
CCDC78-209ENST00000474647 PPIBP23284 216 aaKnown RBP11.89□□□□□ -0.51
CCDC78-209ENST00000474647 GATA3P23771 443 aa11.89□□□□□ -0.51
CCDC78-209ENST00000474647 APLNRP35414 380 aa11.89□□□□□ -0.51
CCDC78-209ENST00000474647 ZNF81P51508 661 aa11.89□□□□□ -0.51
CCDC78-209ENST00000474647 ZNF84P51523 738 aa11.89□□□□□ -0.51
CCDC78-209ENST00000474647 HSF2Q03933 536 aa11.89□□□□□ -0.51
CCDC78-209ENST00000474647 FOXL1Q12952 345 aa11.89□□□□□ -0.51
CCDC78-209ENST00000474647 ZNF74Q16587 644 aa11.89□□□□□ -0.51
CCDC78-209ENST00000474647 MOGQ16653 247 aa11.89□□□□□ -0.51
CCDC78-209ENST00000474647 ARMCX4Q5H9R4 360 aa11.89□□□□□ -0.51
CCDC78-209ENST00000474647 PRR31Q5SQ13 230 aa11.89□□□□□ -0.51
CCDC78-209ENST00000474647 LRIF1Q5T3J3 769 aa11.89□□□□□ -0.51
CCDC78-209ENST00000474647 TTC33Q6PID6 262 aaPredicted RBP11.89□□□□□ -0.51
CCDC78-209ENST00000474647 LRFN4Q6PJG9 635 aa11.89□□□□□ -0.51
CCDC78-209ENST00000474647 RETREG3Q86VR2 466 aa11.89□□□□□ -0.51
CCDC78-209ENST00000474647 TREML1Q86YW5 311 aa11.89□□□□□ -0.51
CCDC78-209ENST00000474647 LRRC17Q8N6Y2 441 aa11.89□□□□□ -0.51
CCDC78-209ENST00000474647 SIGLECL1Q8N7X8 197 aa11.89□□□□□ -0.51
CCDC78-209ENST00000474647 ST7LQ8TDW4 575 aa11.89□□□□□ -0.51
CCDC78-209ENST00000474647 IKZF5Q9H5V7 419 aa11.89□□□□□ -0.51
CCDC78-209ENST00000474647 NTN4Q9HB63 628 aa11.89□□□□□ -0.51
CCDC78-209ENST00000474647 TAS2R5Q9NYW4 299 aa11.89□□□□□ -0.51
CCDC78-209ENST00000474647 CCDC167Q9P0B6 97 aa11.89□□□□□ -0.51
CCDC78-209ENST00000474647 VAPAQ9P0L0 249 aa11.89□□□□□ -0.51
CCDC78-209ENST00000474647 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.89□□□□□ -0.51
CCDC78-209ENST00000474647 ANGPT4Q9Y264 503 aa11.89□□□□□ -0.51
CCDC78-209ENST00000474647 PLSCR5A0PG75 271 aa11.88□□□□□ -0.51
CCDC78-209ENST00000474647 MCIDASD6RGH6 385 aa11.88□□□□□ -0.51
CCDC78-209ENST00000474647 IGHV1-46P01743 117 aa11.88□□□□□ -0.51
CCDC78-209ENST00000474647 IGHV3-13P01766 116 aa11.88□□□□□ -0.51
CCDC78-209ENST00000474647 IGHG1P01857 330 aa11.88□□□□□ -0.51
CCDC78-209ENST00000474647 OPN1SWP03999 348 aa11.88□□□□□ -0.51
CCDC78-209ENST00000474647 HIST1H2ABP04908 130 aa11.88□□□□□ -0.51
CCDC78-209ENST00000474647 GCH1P30793 250 aa11.88□□□□□ -0.51
CCDC78-209ENST00000474647 GABPB1Q06547 395 aaPredicted RBP11.88□□□□□ -0.51
CCDC78-209ENST00000474647 PAGE3Q5JUK9 113 aa11.88□□□□□ -0.51
CCDC78-209ENST00000474647 ENTPD8Q5MY95 495 aa11.88□□□□□ -0.51
CCDC78-209ENST00000474647 ZNF613Q6PF04 617 aa11.88□□□□□ -0.51
CCDC78-209ENST00000474647 SHISA2Q6UWI4 295 aa11.88□□□□□ -0.51
CCDC78-209ENST00000474647 HIST3H2AQ7L7L0 130 aa11.88□□□□□ -0.51
CCDC78-209ENST00000474647 NANOGNBQ7Z5D8 188 aa11.88□□□□□ -0.51
CCDC78-209ENST00000474647 DPPA2Q7Z7J5 298 aa11.88□□□□□ -0.51
CCDC78-209ENST00000474647 CCDC197Q8NCU1 140 aa11.88□□□□□ -0.51
CCDC78-209ENST00000474647 HIPK4Q8NE63 616 aa11.88□□□□□ -0.51
CCDC78-209ENST00000474647 NOXO1Q8NFA2 376 aa11.88□□□□□ -0.51
CCDC78-209ENST00000474647 VANGL1Q8TAA9 524 aaPredicted RBP11.88□□□□□ -0.51
CCDC78-209ENST00000474647 IPCEF1Q8WWN9 437 aaPredicted RBP11.88□□□□□ -0.51
CCDC78-209ENST00000474647 HIST1H2ACQ93077 130 aa11.88□□□□□ -0.51
CCDC78-209ENST00000474647 SPDL1Q96EA4 605 aa11.88□□□□□ -0.51
CCDC78-209ENST00000474647 ZNF347Q96SE7 839 aa11.88□□□□□ -0.51
CCDC78-209ENST00000474647 ZNF747Q9BV97 191 aa11.88□□□□□ -0.51
CCDC78-209ENST00000474647 C1QTNF5Q9BXJ0 243 aa11.88□□□□□ -0.51
CCDC78-209ENST00000474647 TMEM38AQ9H6F2 299 aa11.88□□□□□ -0.51
CCDC78-209ENST00000474647 CCNB1IP1Q9NPC3 277 aa11.88□□□□□ -0.51
CCDC78-209ENST00000474647 SAR1AQ9NR31 198 aa11.88□□□□□ -0.51
CCDC78-209ENST00000474647 OPN4Q9UHM6 478 aa11.88□□□□□ -0.51
CCDC78-209ENST00000474647 CORO2BQ9UQ03 480 aa11.88□□□□□ -0.51
CCDC78-209ENST00000474647 CMYA5Q8N3K9 4069 aa11.87□□□□□ -0.51
CCDC78-209ENST00000474647 DNAJC9-AS1A6NH13 148 aa11.87□□□□□ -0.51
CCDC78-209ENST00000474647 EVPLLA8MZ36 301 aa11.87□□□□□ -0.51
CCDC78-209ENST00000474647 CCDC22O60826 627 aa11.87□□□□□ -0.51
CCDC78-209ENST00000474647 DCTN3O75935 186 aa11.87□□□□□ -0.51
CCDC78-209ENST00000474647 MFN2O95140 757 aa11.87□□□□□ -0.51
CCDC78-209ENST00000474647 FSHBP01225 129 aa11.87□□□□□ -0.51
CCDC78-209ENST00000474647 HKR1P10072 659 aa11.87□□□□□ -0.51
CCDC78-209ENST00000474647 HNRNPA0Q13151 305 aaKnown RBP11.87□□□□□ -0.51
CCDC78-209ENST00000474647 PABPC1L2AQ5JQF8 200 aa11.87□□□□□ -0.51
CCDC78-209ENST00000474647 FAM209AQ5JX71 171 aa11.87□□□□□ -0.51
CCDC78-209ENST00000474647 SYT14Q8NB59 555 aa11.87□□□□□ -0.51
CCDC78-209ENST00000474647 ADAMTS16Q8TE57 1224 aa11.87□□□□□ -0.51
CCDC78-209ENST00000474647 MCHR2Q969V1 340 aa11.87□□□□□ -0.51
CCDC78-209ENST00000474647 ARHGDIGQ99819 225 aa11.87□□□□□ -0.51
CCDC78-209ENST00000474647 MYLK2Q9H1R3 596 aa11.87□□□□□ -0.51
CCDC78-209ENST00000474647 KCNN2Q9H2S1 579 aa11.87□□□□□ -0.51
CCDC78-209ENST00000474647 ZNF696Q9H7X3 374 aa11.87□□□□□ -0.51
CCDC78-209ENST00000474647 EVA1AQ9H8M9 152 aa11.87□□□□□ -0.51
CCDC78-209ENST00000474647 SLC7A7Q9UM01 511 aa11.87□□□□□ -0.51
CCDC78-209ENST00000474647 A0A1W2PRG6 482 aa11.86□□□□□ -0.51
CCDC78-209ENST00000474647 ZSCAN5BA6NJL1 495 aa11.86□□□□□ -0.51
CCDC78-209ENST00000474647 BLOC1S5-TXNDC5H3BN57 136 aa11.86□□□□□ -0.51
CCDC78-209ENST00000474647 SLC22A2O15244 555 aa11.86□□□□□ -0.51
CCDC78-209ENST00000474647 FMO6PO60774 539 aa11.86□□□□□ -0.51
CCDC78-209ENST00000474647 F13BP05160 661 aa11.86□□□□□ -0.51
CCDC78-209ENST00000474647 STOMP27105 288 aa11.86□□□□□ -0.51
CCDC78-209ENST00000474647 MPV17P39210 176 aa11.86□□□□□ -0.51
CCDC78-209ENST00000474647 SLC3A1Q07837 685 aa11.86□□□□□ -0.51
CCDC78-209ENST00000474647 NPTX1Q15818 432 aa11.86□□□□□ -0.51
CCDC78-209ENST00000474647 ZNF718Q3SXZ3 478 aa11.86□□□□□ -0.51
CCDC78-209ENST00000474647 TMEM255AQ5JRV8 349 aa11.86□□□□□ -0.51
CCDC78-209ENST00000474647 THEM4Q5T1C6 240 aa11.86□□□□□ -0.51
CCDC78-209ENST00000474647 BLOC1S3Q6QNY0 202 aa11.86□□□□□ -0.51
CCDC78-209ENST00000474647 LINC00114Q6XXX2 140 aa11.86□□□□□ -0.51
CCDC78-209ENST00000474647 FUNDC1Q8IVP5 155 aa11.86□□□□□ -0.51
CCDC78-209ENST00000474647 ZNF101Q8IZC7 436 aa11.86□□□□□ -0.51
CCDC78-209ENST00000474647 CPEB3Q8NE35 698 aaKnown RBP11.86□□□□□ -0.51
CCDC78-209ENST00000474647 OR6T1Q8NGN1 323 aa11.86□□□□□ -0.51
CCDC78-209ENST00000474647 SLC25A40Q8TBP6 338 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms