RNA–Protein interactions for RNA: ENST00000474426.1

UBR3-208, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 1 (best)

Gene UBR3, Length 4,066 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-208ENST00000474426 INPP5EQ9NRR6 644 aa3.13□□□□□ -1.91
UBR3-208ENST00000474426 AURKAIP1Q9NWT8 199 aaPredicted RBP3.13□□□□□ -1.91
UBR3-208ENST00000474426 CALML5Q9NZT1 146 aa3.13□□□□□ -1.91
UBR3-208ENST00000474426 PACSIN3Q9UKS6 424 aa3.13□□□□□ -1.91
UBR3-208ENST00000474426 AQP7P3A6NL99 342 aa3.13□□□□□ -1.91
UBR3-208ENST00000474426 G3V4G9 280 aa3.13□□□□□ -1.91
UBR3-208ENST00000474426 RPL36A-HNRNPH2H7BZ11 118 aa3.13□□□□□ -1.91
UBR3-208ENST00000474426 PDCD5O14737 125 aa3.13□□□□□ -1.91
UBR3-208ENST00000474426 CHST1O43916 411 aa3.13□□□□□ -1.91
UBR3-208ENST00000474426 RAD17O75943 681 aa3.13□□□□□ -1.91
UBR3-208ENST00000474426 IL2RAP01589 272 aa3.13□□□□□ -1.91
UBR3-208ENST00000474426 THY1P04216 161 aa3.13□□□□□ -1.91
UBR3-208ENST00000474426 HIST1H1EP10412 219 aaKnown RBP3.13□□□□□ -1.91
UBR3-208ENST00000474426 COX7A2P14406 83 aa3.13□□□□□ -1.91
UBR3-208ENST00000474426 ATP1B2P14415 290 aaPredicted RBP3.13□□□□□ -1.91
UBR3-208ENST00000474426 RCC1P18754 421 aaPredicted RBP3.13□□□□□ -1.91
UBR3-208ENST00000474426 AZU1P20160 251 aa3.13□□□□□ -1.91
UBR3-208ENST00000474426 MALP21145 153 aa3.13□□□□□ -1.91
UBR3-208ENST00000474426 RPS12P25398 132 aaKnown RBP3.13□□□□□ -1.91
UBR3-208ENST00000474426 CD40P25942 277 aa3.13□□□□□ -1.91
UBR3-208ENST00000474426 GLP1RP43220 463 aa3.13□□□□□ -1.91
UBR3-208ENST00000474426 DNASE1L1P49184 302 aa3.13□□□□□ -1.91
UBR3-208ENST00000474426 RHOAP61586 193 aa3.13□□□□□ -1.91
UBR3-208ENST00000474426 NFATC2Q13469 925 aa3.13□□□□□ -1.91
UBR3-208ENST00000474426 GNMTQ14749 295 aa3.13□□□□□ -1.91
UBR3-208ENST00000474426 RAB35Q15286 201 aa3.13□□□□□ -1.91
UBR3-208ENST00000474426 FCN2Q15485 313 aa3.13□□□□□ -1.91
UBR3-208ENST00000474426 ZNF174Q15697 407 aa3.13□□□□□ -1.91
UBR3-208ENST00000474426 HIST2H2ACQ16777 129 aaPredicted RBP3.13□□□□□ -1.91
UBR3-208ENST00000474426 TRMT5Q32P41 509 aaKnown RBP3.13□□□□□ -1.91
UBR3-208ENST00000474426 DPCR1Q3MIW9 517 aa3.13□□□□□ -1.91
UBR3-208ENST00000474426 MESTQ5EB52 335 aa3.13□□□□□ -1.91
UBR3-208ENST00000474426 STEAP1BQ6NZ63 245 aa3.13□□□□□ -1.91
UBR3-208ENST00000474426 TMPRSS11AQ6ZMR5 421 aa3.13□□□□□ -1.91
UBR3-208ENST00000474426 ZNF841Q6ZN19 808 aa3.13□□□□□ -1.91
UBR3-208ENST00000474426 GLT6D1Q7Z4J2 308 aa3.13□□□□□ -1.91
UBR3-208ENST00000474426 CBLN2Q8IUK8 224 aa3.13□□□□□ -1.91
UBR3-208ENST00000474426 PNLDC1Q8NA58 520 aaKnown RBP3.13□□□□□ -1.91
UBR3-208ENST00000474426 KIAA0895Q8NCT3 520 aa3.13□□□□□ -1.91
UBR3-208ENST00000474426 OR10G9Q8NGN4 311 aa3.13□□□□□ -1.91
UBR3-208ENST00000474426 SLC7A13Q8TCU3 470 aa3.13□□□□□ -1.91
UBR3-208ENST00000474426 LCN9Q8WX39 176 aa3.13□□□□□ -1.91
UBR3-208ENST00000474426 SCMH1Q96GD3 660 aa3.13□□□□□ -1.91
UBR3-208ENST00000474426 DCUN1D1Q96GG9 259 aa3.13□□□□□ -1.91
UBR3-208ENST00000474426 TMEM121Q9BTD3 319 aa3.13□□□□□ -1.91
UBR3-208ENST00000474426 RIOK2Q9BVS4 552 aaKnown RBP3.13□□□□□ -1.91
UBR3-208ENST00000474426 SCAND2PQ9GZW5 306 aaPredicted RBP3.13□□□□□ -1.91
UBR3-208ENST00000474426 MFSD1Q9H3U5 465 aa3.13□□□□□ -1.91
UBR3-208ENST00000474426 TRIM36Q9NQ86 728 aa3.13□□□□□ -1.91
UBR3-208ENST00000474426 ASAH2Q9NR71 780 aa3.13□□□□□ -1.91
UBR3-208ENST00000474426 MYOTQ9UBF9 498 aa3.13□□□□□ -1.91
UBR3-208ENST00000474426 STEAP1Q9UHE8 339 aa3.13□□□□□ -1.91
UBR3-208ENST00000474426 CD207Q9UJ71 328 aa3.13□□□□□ -1.91
UBR3-208ENST00000474426 TONSLQ96HA7 1378 aa3.13□□□□□ -1.91
UBR3-208ENST00000474426 TRAV8-7A0A075B6U6 113 aa3.13□□□□□ -1.91
UBR3-208ENST00000474426 TMEM200CA6NKL6 621 aa3.13□□□□□ -1.91
UBR3-208ENST00000474426 SHISA7A6NL88 538 aa3.13□□□□□ -1.91
UBR3-208ENST00000474426 C15orf65H3BRN8 121 aa3.13□□□□□ -1.91
UBR3-208ENST00000474426 ZNF217O75362 1048 aa3.13□□□□□ -1.91
UBR3-208ENST00000474426 STK16O75716 305 aa3.13□□□□□ -1.91
UBR3-208ENST00000474426 TOX4O94842 621 aa3.13□□□□□ -1.91
UBR3-208ENST00000474426 NDUFB8O95169 186 aa3.13□□□□□ -1.91
UBR3-208ENST00000474426 ORM1P02763 201 aa3.13□□□□□ -1.91
UBR3-208ENST00000474426 DCNP07585 359 aaKnown RBP3.13□□□□□ -1.91
UBR3-208ENST00000474426 HLA-EP13747 358 aa3.13□□□□□ -1.91
UBR3-208ENST00000474426 CD44P16070 742 aaKnown RBP3.13□□□□□ -1.91
UBR3-208ENST00000474426 ZNF17P17021 662 aa3.13□□□□□ -1.91
UBR3-208ENST00000474426 CD96P40200 585 aa3.13□□□□□ -1.91
UBR3-208ENST00000474426 KIR2DS4P43632 304 aa3.13□□□□□ -1.91
UBR3-208ENST00000474426 ATP1B3P54709 279 aa3.13□□□□□ -1.91
UBR3-208ENST00000474426 P2RY6Q15077 328 aa3.13□□□□□ -1.91
UBR3-208ENST00000474426 POU2AF1Q16633 256 aa3.13□□□□□ -1.91
UBR3-208ENST00000474426 ARHGAP11BQ3KRB8 267 aa3.13□□□□□ -1.91
UBR3-208ENST00000474426 TMEM201Q5SNT2 666 aa3.13□□□□□ -1.91
UBR3-208ENST00000474426 WDR82Q6UXN9 313 aa3.13□□□□□ -1.91
UBR3-208ENST00000474426 Q6ZSR3 168 aa3.13□□□□□ -1.91
UBR3-208ENST00000474426 CMTM1Q8IZ96 169 aa3.13□□□□□ -1.91
UBR3-208ENST00000474426 C8orf59Q8N0T1 100 aaPredicted RBP3.13□□□□□ -1.91
UBR3-208ENST00000474426 MUC20Q8N307 709 aaPredicted RBP3.13□□□□□ -1.91
UBR3-208ENST00000474426 MS4A15Q8N5U1 240 aa3.13□□□□□ -1.91
UBR3-208ENST00000474426 POC1AQ8NBT0 407 aa3.13□□□□□ -1.91
UBR3-208ENST00000474426 BPIFB6Q8NFQ5 453 aa3.13□□□□□ -1.91
UBR3-208ENST00000474426 ISOC2Q96AB3 205 aa3.13□□□□□ -1.91
UBR3-208ENST00000474426 MRAP2Q96G30 205 aa3.13□□□□□ -1.91
UBR3-208ENST00000474426 HYLS1Q96M11 299 aa3.13□□□□□ -1.91
UBR3-208ENST00000474426 CPXM1Q96SM3 734 aa3.13□□□□□ -1.91
UBR3-208ENST00000474426 ACOX2Q99424 681 aa3.13□□□□□ -1.91
UBR3-208ENST00000474426 SLC39A8Q9C0K1 460 aa3.13□□□□□ -1.91
UBR3-208ENST00000474426 NUFIP1Q9UHK0 495 aaKnown RBP3.13□□□□□ -1.91
UBR3-208ENST00000474426 PPIAL4AQ9Y536 164 aa3.13□□□□□ -1.91
UBR3-208ENST00000474426 ENTPD2Q9Y5L3 495 aa3.13□□□□□ -1.91
UBR3-208ENST00000474426 ETV7Q9Y603 341 aa3.13□□□□□ -1.91
UBR3-208ENST00000474426 ADAMTSL3P82987 1691 aa3.12□□□□□ -1.91
UBR3-208ENST00000474426 SIPA1L1O43166 1804 aa3.12□□□□□ -1.91
UBR3-208ENST00000474426 DUOX2Q9NRD8 1548 aa3.12□□□□□ -1.91
UBR3-208ENST00000474426 MBD3L4A6NDZ8 208 aaPredicted RBP3.12□□□□□ -1.91
UBR3-208ENST00000474426 MBD3L3A6NE82 208 aaPredicted RBP3.12□□□□□ -1.91
UBR3-208ENST00000474426 MBD3L5A6NJ08 208 aaPredicted RBP3.12□□□□□ -1.91
UBR3-208ENST00000474426 TBC1D3HP0C7X1 549 aa3.12□□□□□ -1.91
UBR3-208ENST00000474426 ESDP10768 282 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms