RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 OR4D11Q8NGI4 311 aa7.85□□□□□ -1.15
VCL-204ENST00000472585 OR5J2Q8NH18 312 aa7.85□□□□□ -1.15
VCL-204ENST00000472585 BBS10Q8TAM1 723 aa7.85□□□□□ -1.15
VCL-204ENST00000472585 AENQ8WTP8 325 aaKnown RBP7.85□□□□□ -1.15
VCL-204ENST00000472585 GEMIN6Q8WXD5 167 aaKnown RBP7.85□□□□□ -1.15
VCL-204ENST00000472585 C11orf40Q8WZ69 217 aa7.85□□□□□ -1.15
VCL-204ENST00000472585 MCHR2Q969V1 340 aa7.85□□□□□ -1.15
VCL-204ENST00000472585 MAELQ96JY0 434 aaKnown RBP7.85□□□□□ -1.15
VCL-204ENST00000472585 ZNF347Q96SE7 839 aa7.85□□□□□ -1.15
VCL-204ENST00000472585 CITED1Q99966 193 aa7.85□□□□□ -1.15
VCL-204ENST00000472585 RBM4BQ9BQ04 359 aaKnown RBP7.85□□□□□ -1.15
VCL-204ENST00000472585 ASPNQ9BXN1 380 aa7.85□□□□□ -1.15
VCL-204ENST00000472585 MRPL13Q9BYD1 178 aaKnown RBP7.85□□□□□ -1.15
VCL-204ENST00000472585 ARMC7Q9H6L4 198 aa7.85□□□□□ -1.15
VCL-204ENST00000472585 SAP30LQ9HAJ7 183 aa7.85□□□□□ -1.15
VCL-204ENST00000472585 SDR39U1Q9NRG7 319 aaPredicted RBP7.85□□□□□ -1.15
VCL-204ENST00000472585 DECR2Q9NUI1 292 aa7.85□□□□□ -1.15
VCL-204ENST00000472585 UBAP1Q9NZ09 502 aa7.85□□□□□ -1.15
VCL-204ENST00000472585 EGFL7Q9UHF1 273 aa7.85□□□□□ -1.15
VCL-204ENST00000472585 PURGQ9UJV8 347 aaKnown RBP7.85□□□□□ -1.15
VCL-204ENST00000472585 POLR3KQ9Y2Y1 108 aaPredicted RBP7.85□□□□□ -1.15
VCL-204ENST00000472585 AUP1Q9Y679 476 aa7.85□□□□□ -1.15
VCL-204ENST00000472585 KMT2CQ8NEZ4 4911 aaKnown RBP7.85□□□□□ -1.15
VCL-204ENST00000472585 IGHV3OR16-10A0A075B7F0 116 aa7.84□□□□□ -1.15
VCL-204ENST00000472585 MDFIC2A0A1B0GVS7 189 aa7.84□□□□□ -1.15
VCL-204ENST00000472585 ISPDA4D126 451 aa7.84□□□□□ -1.15
VCL-204ENST00000472585 FOXH1O75593 365 aa7.84□□□□□ -1.15
VCL-204ENST00000472585 ANP32DO95626 131 aa7.84□□□□□ -1.15
VCL-204ENST00000472585 GPANK1O95872 356 aa7.84□□□□□ -1.15
VCL-204ENST00000472585 CH25HO95992 272 aa7.84□□□□□ -1.15
VCL-204ENST00000472585 NGFP01138 241 aa7.84□□□□□ -1.15
VCL-204ENST00000472585 IGHV2-70P01814 119 aa7.84□□□□□ -1.15
VCL-204ENST00000472585 IGHV4-38-2P0DP08 117 aa7.84□□□□□ -1.15
VCL-204ENST00000472585 KITP10721 976 aa7.84□□□□□ -1.15
VCL-204ENST00000472585 ZNF12P17014 697 aa7.84□□□□□ -1.15
VCL-204ENST00000472585 CDAP32320 146 aa7.84□□□□□ -1.15
VCL-204ENST00000472585 CD80P33681 288 aa7.84□□□□□ -1.15
VCL-204ENST00000472585 SLC6A9P48067 706 aa7.84□□□□□ -1.15
VCL-204ENST00000472585 ZNF81P51508 661 aa7.84□□□□□ -1.15
VCL-204ENST00000472585 POLR2JP52435 117 aaKnown RBP7.84□□□□□ -1.15
VCL-204ENST00000472585 PAX2Q02962 417 aa7.84□□□□□ -1.15
VCL-204ENST00000472585 IFFO1Q0D2I5 559 aa7.84□□□□□ -1.15
VCL-204ENST00000472585 ZNF74Q16587 644 aa7.84□□□□□ -1.15
VCL-204ENST00000472585 PAGE3Q5JUK9 113 aa7.84□□□□□ -1.15
VCL-204ENST00000472585 C6orf10Q5SRN2 563 aa7.84□□□□□ -1.15
VCL-204ENST00000472585 OLFML2AQ68BL7 652 aa7.84□□□□□ -1.15
VCL-204ENST00000472585 RHOUQ7L0Q8 258 aa7.84□□□□□ -1.15
VCL-204ENST00000472585 FUNDC1Q8IVP5 155 aa7.84□□□□□ -1.15
VCL-204ENST00000472585 LRRC18Q8N456 261 aa7.84□□□□□ -1.15
VCL-204ENST00000472585 C10orf53Q8N6V4 93 aa7.84□□□□□ -1.15
VCL-204ENST00000472585 OR1J1Q8NGS3 322 aa7.84□□□□□ -1.15
VCL-204ENST00000472585 SLC25A40Q8TBP6 338 aa7.84□□□□□ -1.15
VCL-204ENST00000472585 IPCEF1Q8WWN9 437 aaPredicted RBP7.84□□□□□ -1.15
VCL-204ENST00000472585 NMD3Q96D46 503 aaKnown RBP7.84□□□□□ -1.15
VCL-204ENST00000472585 SLC25A44Q96H78 314 aaPredicted RBP7.84□□□□□ -1.15
VCL-204ENST00000472585 ITCHQ96J02 903 aa7.84□□□□□ -1.15
VCL-204ENST00000472585 POM121L2Q96KW2 1035 aa7.84□□□□□ -1.15
VCL-204ENST00000472585 DCLRE1CQ96SD1 692 aaKnown RBP7.84□□□□□ -1.15
VCL-204ENST00000472585 ZBTB18Q99592 522 aa7.84□□□□□ -1.15
VCL-204ENST00000472585 SEPHS2Q99611 448 aa7.84□□□□□ -1.15
VCL-204ENST00000472585 TMEM43Q9BTV4 400 aa7.84□□□□□ -1.15
VCL-204ENST00000472585 MRI1Q9BV20 369 aa7.84□□□□□ -1.15
VCL-204ENST00000472585 RNF121Q9H920 327 aa7.84□□□□□ -1.15
VCL-204ENST00000472585 CDH20Q9HBT6 801 aa7.84□□□□□ -1.15
VCL-204ENST00000472585 MSL2Q9HCI7 577 aa7.84□□□□□ -1.15
VCL-204ENST00000472585 THUMPD1Q9NXG2 353 aaKnown RBP7.84□□□□□ -1.15
VCL-204ENST00000472585 ZIM2Q9NZV7 527 aa7.84□□□□□ -1.15
VCL-204ENST00000472585 FBXL3Q9UKT7 428 aa7.84□□□□□ -1.15
VCL-204ENST00000472585 TRIM33Q9UPN9 1127 aa7.84□□□□□ -1.15
VCL-204ENST00000472585 UGT2A1Q9Y4X1 527 aa7.84□□□□□ -1.15
VCL-204ENST00000472585 INSIG2Q9Y5U4 225 aa7.84□□□□□ -1.15
VCL-204ENST00000472585 TRBV5-3A0A0A0MS03 114 aa7.83□□□□□ -1.16
VCL-204ENST00000472585 SLC22A23A1A5C7 686 aa7.83□□□□□ -1.16
VCL-204ENST00000472585 M0R3H8 397 aa7.83□□□□□ -1.16
VCL-204ENST00000472585 HDAC3O15379 428 aa7.83□□□□□ -1.16
VCL-204ENST00000472585 ADH4P08319 380 aa7.83□□□□□ -1.16
VCL-204ENST00000472585 SBK2P0C263 348 aa7.83□□□□□ -1.16
VCL-204ENST00000472585 ASAH2BP0C7U1 165 aa7.83□□□□□ -1.16
VCL-204ENST00000472585 IDO1P14902 403 aa7.83□□□□□ -1.16
VCL-204ENST00000472585 AQP1P29972 269 aa7.83□□□□□ -1.16
VCL-204ENST00000472585 RAG2P55895 527 aa7.83□□□□□ -1.16
VCL-204ENST00000472585 CDK6Q00534 326 aa7.83□□□□□ -1.16
VCL-204ENST00000472585 PAX8Q06710 450 aa7.83□□□□□ -1.16
VCL-204ENST00000472585 FADDQ13158 208 aa7.83□□□□□ -1.16
VCL-204ENST00000472585 TAF9Q16594 264 aa7.83□□□□□ -1.16
VCL-204ENST00000472585 DUSP7Q16829 419 aa7.83□□□□□ -1.16
VCL-204ENST00000472585 TBC1D28Q2M2D7 210 aa7.83□□□□□ -1.16
VCL-204ENST00000472585 PABPC1L2AQ5JQF8 200 aa7.83□□□□□ -1.16
VCL-204ENST00000472585 FAM209AQ5JX71 171 aa7.83□□□□□ -1.16
VCL-204ENST00000472585 LRIF1Q5T3J3 769 aa7.83□□□□□ -1.16
VCL-204ENST00000472585 NXNQ6DKJ4 435 aa7.83□□□□□ -1.16
VCL-204ENST00000472585 TMEM53Q6P2H8 277 aa7.83□□□□□ -1.16
VCL-204ENST00000472585 Q6ZR03 302 aa7.83□□□□□ -1.16
VCL-204ENST00000472585 MSANTD1Q6ZTZ1 278 aa7.83□□□□□ -1.16
VCL-204ENST00000472585 SLC16A14Q7RTX9 510 aa7.83□□□□□ -1.16
VCL-204ENST00000472585 SMYD1Q8NB12 490 aa7.83□□□□□ -1.16
VCL-204ENST00000472585 GPR32P1Q8NGA4 272 aa7.83□□□□□ -1.16
VCL-204ENST00000472585 AKR7LQ8NHP1 331 aa7.83□□□□□ -1.16
VCL-204ENST00000472585 KLF14Q8TD94 323 aaPredicted RBP7.83□□□□□ -1.16
VCL-204ENST00000472585 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms