RNA–Protein interactions for RNA: ENST00000471752.1

USP48-207, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-207ENST00000471752 ARFIP2P53365 341 aa6.88□□□□□ -1.31
USP48-207ENST00000471752 UCP2P55851 309 aa6.88□□□□□ -1.31
USP48-207ENST00000471752 CLRN1P58418 232 aa6.88□□□□□ -1.31
USP48-207ENST00000471752 TAS2R41P59536 307 aa6.88□□□□□ -1.31
USP48-207ENST00000471752 ERVK-25P63136 954 aa6.88□□□□□ -1.31
USP48-207ENST00000471752 PSG4Q00888 419 aa6.88□□□□□ -1.31
USP48-207ENST00000471752 TSTQ16762 297 aaKnown RBP6.88□□□□□ -1.31
USP48-207ENST00000471752 LRRC23Q53EV4 343 aaPredicted RBP6.88□□□□□ -1.31
USP48-207ENST00000471752 ZNF774Q6NX45 483 aa6.88□□□□□ -1.31
USP48-207ENST00000471752 HIST3H2AQ7L7L0 130 aa6.88□□□□□ -1.31
USP48-207ENST00000471752 SLC16A14Q7RTX9 510 aa6.88□□□□□ -1.31
USP48-207ENST00000471752 SLC15A3Q8IY34 581 aa6.88□□□□□ -1.31
USP48-207ENST00000471752 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.88□□□□□ -1.31
USP48-207ENST00000471752 OR51A7Q8NH64 312 aa6.88□□□□□ -1.31
USP48-207ENST00000471752 STON2Q8WXE9 905 aa6.88□□□□□ -1.31
USP48-207ENST00000471752 SLC7A6Q92536 515 aa6.88□□□□□ -1.31
USP48-207ENST00000471752 RDH5Q92781 318 aa6.88□□□□□ -1.31
USP48-207ENST00000471752 HIST1H2ACQ93077 130 aa6.88□□□□□ -1.31
USP48-207ENST00000471752 RCN3Q96D15 328 aa6.88□□□□□ -1.31
USP48-207ENST00000471752 SGTBQ96EQ0 304 aa6.88□□□□□ -1.31
USP48-207ENST00000471752 TPD52L3Q96J77 140 aa6.88□□□□□ -1.31
USP48-207ENST00000471752 MPP4Q96JB8 637 aa6.88□□□□□ -1.31
USP48-207ENST00000471752 POM121L2Q96KW2 1035 aa6.88□□□□□ -1.31
USP48-207ENST00000471752 ECSITQ9BQ95 431 aa6.88□□□□□ -1.31
USP48-207ENST00000471752 ZNF416Q9BWM5 594 aa6.88□□□□□ -1.31
USP48-207ENST00000471752 EMC7Q9NPA0 242 aa6.88□□□□□ -1.31
USP48-207ENST00000471752 INIPQ9NRY2 104 aa6.88□□□□□ -1.31
USP48-207ENST00000471752 HIF1ANQ9NWT6 349 aa6.88□□□□□ -1.31
USP48-207ENST00000471752 TRIM33Q9UPN9 1127 aa6.88□□□□□ -1.31
USP48-207ENST00000471752 WNK2Q9Y3S1 2297 aa6.88□□□□□ -1.31
USP48-207ENST00000471752 TGP01266 2768 aa6.87□□□□□ -1.31
USP48-207ENST00000471752 IGLV3-9A0A075B6K5 115 aa6.87□□□□□ -1.31
USP48-207ENST00000471752 A0A1W2PPW3 197 aa6.87□□□□□ -1.31
USP48-207ENST00000471752 C5orf49A4QMS7 147 aa6.87□□□□□ -1.31
USP48-207ENST00000471752 ZSCAN5BA6NJL1 495 aa6.87□□□□□ -1.31
USP48-207ENST00000471752 C17orf100A8MU93 164 aa6.87□□□□□ -1.31
USP48-207ENST00000471752 DEAF1O75398 565 aaPredicted RBP6.87□□□□□ -1.31
USP48-207ENST00000471752 PRSS23O95084 383 aa6.87□□□□□ -1.31
USP48-207ENST00000471752 OR5F1O95221 314 aa6.87□□□□□ -1.31
USP48-207ENST00000471752 MPZL1O95297 269 aa6.87□□□□□ -1.31
USP48-207ENST00000471752 IGHG1P01857 330 aa6.87□□□□□ -1.31
USP48-207ENST00000471752 GAAP10253 952 aa6.87□□□□□ -1.31
USP48-207ENST00000471752 IFI30P13284 250 aa6.87□□□□□ -1.31
USP48-207ENST00000471752 NCK1P16333 377 aa6.87□□□□□ -1.31
USP48-207ENST00000471752 GPR6P46095 362 aaPredicted RBP6.87□□□□□ -1.31
USP48-207ENST00000471752 PRR20EP86478 221 aa6.87□□□□□ -1.31
USP48-207ENST00000471752 PRR20CP86479 221 aa6.87□□□□□ -1.31
USP48-207ENST00000471752 PRR20DP86480 221 aa6.87□□□□□ -1.31
USP48-207ENST00000471752 PRR20BP86481 221 aa6.87□□□□□ -1.31
USP48-207ENST00000471752 PRR20AP86496 221 aa6.87□□□□□ -1.31
USP48-207ENST00000471752 GALK2Q01415 458 aa6.87□□□□□ -1.31
USP48-207ENST00000471752 CYLC2Q14093 348 aaPredicted RBP6.87□□□□□ -1.31
USP48-207ENST00000471752 ENDOGQ14249 297 aaKnown RBP6.87□□□□□ -1.31
USP48-207ENST00000471752 C10orf128Q5T292 105 aa6.87□□□□□ -1.31
USP48-207ENST00000471752 METTL21CQ5VZV1 264 aa6.87□□□□□ -1.31
USP48-207ENST00000471752 RGS7BPQ6MZT1 257 aaPredicted RBP6.87□□□□□ -1.31
USP48-207ENST00000471752 RFPL4BQ6ZWI9 263 aa6.87□□□□□ -1.31
USP48-207ENST00000471752 NRMQ8IXM6 262 aa6.87□□□□□ -1.31
USP48-207ENST00000471752 ZNF540Q8NDQ6 660 aa6.87□□□□□ -1.31
USP48-207ENST00000471752 NOXO1Q8NFA2 376 aa6.87□□□□□ -1.31
USP48-207ENST00000471752 OR8J3Q8NGG0 315 aa6.87□□□□□ -1.31
USP48-207ENST00000471752 OR13C2Q8NGS9 318 aa6.87□□□□□ -1.31
USP48-207ENST00000471752 SYNPRQ8TBG9 265 aa6.87□□□□□ -1.31
USP48-207ENST00000471752 TSPEARQ8WU66 669 aa6.87□□□□□ -1.31
USP48-207ENST00000471752 IPCEF1Q8WWN9 437 aaPredicted RBP6.87□□□□□ -1.31
USP48-207ENST00000471752 TAF15Q92804 592 aaKnown RBP eCLIP6.87□□□□□ -1.31
USP48-207ENST00000471752 MARS2Q96GW9 593 aaKnown RBP6.87□□□□□ -1.31
USP48-207ENST00000471752 GPA33Q99795 319 aa6.87□□□□□ -1.31
USP48-207ENST00000471752 SLC19A3Q9BZV2 496 aa6.87□□□□□ -1.31
USP48-207ENST00000471752 OR2J1Q9GZK6 312 aa6.87□□□□□ -1.31
USP48-207ENST00000471752 VIPAS39Q9H9C1 493 aa6.87□□□□□ -1.31
USP48-207ENST00000471752 SIAEQ9HAT2 523 aa6.87□□□□□ -1.31
USP48-207ENST00000471752 MYOZ1Q9NP98 299 aaPredicted RBP6.87□□□□□ -1.31
USP48-207ENST00000471752 HINT3Q9NQE9 182 aaKnown RBP6.87□□□□□ -1.31
USP48-207ENST00000471752 LPAR3Q9UBY5 353 aa6.87□□□□□ -1.31
USP48-207ENST00000471752 IL20RAQ9UHF4 553 aa6.87□□□□□ -1.31
USP48-207ENST00000471752 ADAM18Q9Y3Q7 739 aa6.87□□□□□ -1.31
USP48-207ENST00000471752 SOX21Q9Y651 276 aaPredicted RBP6.87□□□□□ -1.31
USP48-207ENST00000471752 LOC105371242A0A075B767 164 aa6.86□□□□□ -1.31
USP48-207ENST00000471752 A0A087WUU8 490 aa6.86□□□□□ -1.31
USP48-207ENST00000471752 A0A1W2PRG6 482 aa6.86□□□□□ -1.31
USP48-207ENST00000471752 VSTM5A8MXK1 200 aa6.86□□□□□ -1.31
USP48-207ENST00000471752 MCIDASD6RGH6 385 aa6.86□□□□□ -1.31
USP48-207ENST00000471752 NME4O00746 187 aa6.86□□□□□ -1.31
USP48-207ENST00000471752 SPRY3O43610 288 aa6.86□□□□□ -1.31
USP48-207ENST00000471752 PLPP2O43688 288 aa6.86□□□□□ -1.31
USP48-207ENST00000471752 DIRAS1O95057 198 aa6.86□□□□□ -1.31
USP48-207ENST00000471752 IGHV1-46P01743 117 aa6.86□□□□□ -1.31
USP48-207ENST00000471752 SAGP10523 405 aaPredicted RBP6.86□□□□□ -1.31
USP48-207ENST00000471752 ANOS1P23352 680 aa6.86□□□□□ -1.31
USP48-207ENST00000471752 PAX7P23759 505 aa6.86□□□□□ -1.31
USP48-207ENST00000471752 ZFP36P26651 326 aaKnown RBP6.86□□□□□ -1.31
USP48-207ENST00000471752 STOMP27105 288 aa6.86□□□□□ -1.31
USP48-207ENST00000471752 SRP14P37108 136 aaKnown RBP6.86□□□□□ -1.31
USP48-207ENST00000471752 MMP15P51511 669 aa6.86□□□□□ -1.31
USP48-207ENST00000471752 FXYD6P3P58550 94 aa6.86□□□□□ -1.31
USP48-207ENST00000471752 CTXN1P60606 82 aa6.86□□□□□ -1.31
USP48-207ENST00000471752 HOXA4Q00056 320 aaPredicted RBP6.86□□□□□ -1.31
USP48-207ENST00000471752 LIPEQ05469 1076 aa6.86□□□□□ -1.31
USP48-207ENST00000471752 NKPD1Q17RQ9 610 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms