RNA–Protein interactions for RNA: ENST00000471694.1

CD47-204, Transcript of CD47 molecule, humanhuman

TSL 1 (best)

Gene CD47, Length 6,796 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-204ENST00000471694 SMIM17P0DL12 118 aa7.84□□□□□ -1.15
CD47-204ENST00000471694 LIPCP11150 499 aa7.84□□□□□ -1.15
CD47-204ENST00000471694 SMIM21Q3B7S5 101 aa7.84□□□□□ -1.15
CD47-204ENST00000471694 SYT9Q86SS6 491 aa7.84□□□□□ -1.15
CD47-204ENST00000471694 CDC20BQ86Y33 519 aa7.84□□□□□ -1.15
CD47-204ENST00000471694 TNFRSF13CQ96RJ3 184 aa7.84□□□□□ -1.15
CD47-204ENST00000471694 ALG12Q9BV10 488 aa7.84□□□□□ -1.15
CD47-204ENST00000471694 NMNAT2Q9BZQ4 307 aa7.84□□□□□ -1.15
CD47-204ENST00000471694 SLC7A8Q9UHI5 535 aa7.84□□□□□ -1.15
CD47-204ENST00000471694 LRRC42Q9Y546 428 aa7.84□□□□□ -1.15
CD47-204ENST00000471694 DNAJC15Q9Y5T4 150 aa7.84□□□□□ -1.15
CD47-204ENST00000471694 GMEB1Q9Y692 573 aa7.84□□□□□ -1.15
CD47-204ENST00000471694 A6NIN4 97 aa7.84□□□□□ -1.15
CD47-204ENST00000471694 FAM183AA6NL82 134 aa7.84□□□□□ -1.15
CD47-204ENST00000471694 PF4P02776 101 aa7.84□□□□□ -1.15
CD47-204ENST00000471694 APEHP13798 732 aaKnown RBP7.84□□□□□ -1.15
CD47-204ENST00000471694 HTRA4P83105 476 aaPredicted RBP7.84□□□□□ -1.15
CD47-204ENST00000471694 DPTQ07507 201 aa7.84□□□□□ -1.15
CD47-204ENST00000471694 MAB21L1Q13394 359 aa7.84□□□□□ -1.15
CD47-204ENST00000471694 MICBQ29980 383 aa7.84□□□□□ -1.15
CD47-204ENST00000471694 ZNF517Q6ZMY9 492 aaPredicted RBP7.84□□□□□ -1.15
CD47-204ENST00000471694 C17orf107Q6ZR85 190 aa7.84□□□□□ -1.15
CD47-204ENST00000471694 PDZD9Q8IXQ8 264 aa7.84□□□□□ -1.15
CD47-204ENST00000471694 SLC35F3Q8IY50 421 aa7.84□□□□□ -1.15
CD47-204ENST00000471694 ZDHHC23Q8IYP9 409 aa7.84□□□□□ -1.15
CD47-204ENST00000471694 FGGYQ96C11 551 aa7.84□□□□□ -1.15
CD47-204ENST00000471694 SPACA9Q96E40 222 aaPredicted RBP7.84□□□□□ -1.15
CD47-204ENST00000471694 MYOM1P52179 1685 aa7.84□□□□□ -1.15
CD47-204ENST00000471694 C21orf140B9A014 251 aa7.84□□□□□ -1.15
CD47-204ENST00000471694 M0R082 166 aa7.84□□□□□ -1.15
CD47-204ENST00000471694 AKAIN1P0CW23 69 aa7.84□□□□□ -1.15
CD47-204ENST00000471694 CD22P20273 847 aa7.84□□□□□ -1.15
CD47-204ENST00000471694 GABRA5P31644 462 aa7.84□□□□□ -1.15
CD47-204ENST00000471694 GSCP56915 257 aaPredicted RBP7.84□□□□□ -1.15
CD47-204ENST00000471694 KLF3P57682 345 aaPredicted RBP7.84□□□□□ -1.15
CD47-204ENST00000471694 PGBD5Q8N414 524 aa7.84□□□□□ -1.15
CD47-204ENST00000471694 SIMC1Q8NDZ2 872 aa7.84□□□□□ -1.15
CD47-204ENST00000471694 OR6T1Q8NGN1 323 aa7.84□□□□□ -1.15
CD47-204ENST00000471694 GNRHR2Q96P88 292 aa7.84□□□□□ -1.15
CD47-204ENST00000471694 C20orf24Q9BUV8 137 aa7.84□□□□□ -1.15
CD47-204ENST00000471694 CLEC5AQ9NY25 188 aa7.84□□□□□ -1.15
CD47-204ENST00000471694 POMT2Q9UKY4 750 aa7.84□□□□□ -1.15
CD47-204ENST00000471694 PRKYO43930 277 aa7.84□□□□□ -1.15
CD47-204ENST00000471694 HPP00738 406 aa7.84□□□□□ -1.15
CD47-204ENST00000471694 MGST1P10620 155 aaKnown RBP7.84□□□□□ -1.15
CD47-204ENST00000471694 GM2AP17900 193 aa7.84□□□□□ -1.15
CD47-204ENST00000471694 CLDN6P56747 220 aa7.84□□□□□ -1.15
CD47-204ENST00000471694 TMPRSS11FQ6ZWK6 438 aa7.84□□□□□ -1.15
CD47-204ENST00000471694 KCTD20Q7Z5Y7 419 aa7.84□□□□□ -1.15
CD47-204ENST00000471694 RNF113BQ8IZP6 322 aaKnown RBP7.84□□□□□ -1.15
CD47-204ENST00000471694 OR8J2Q8NGG1 315 aa7.84□□□□□ -1.15
CD47-204ENST00000471694 C12orf43Q96C57 262 aaKnown RBP7.84□□□□□ -1.15
CD47-204ENST00000471694 RAB3CQ96E17 227 aa7.84□□□□□ -1.15
CD47-204ENST00000471694 GLI3P10071 1580 aa7.84□□□□□ -1.15
CD47-204ENST00000471694 LOXHD1Q8IVV2 1947 aa7.84□□□□□ -1.15
CD47-204ENST00000471694 LAMB4A4D0S4 1761 aa7.84□□□□□ -1.15
CD47-204ENST00000471694 TMEM72A0PK05 275 aa7.84□□□□□ -1.15
CD47-204ENST00000471694 ARPC3O15145 178 aa7.84□□□□□ -1.15
CD47-204ENST00000471694 T-ENOLP0DO92 83 aa7.84□□□□□ -1.15
CD47-204ENST00000471694 B4GALT1P15291 398 aa7.84□□□□□ -1.15
CD47-204ENST00000471694 TNK1Q13470 666 aa7.84□□□□□ -1.15
CD47-204ENST00000471694 CPZQ66K79 652 aa7.84□□□□□ -1.15
CD47-204ENST00000471694 Q6ZTK2 550 aa7.84□□□□□ -1.15
CD47-204ENST00000471694 OR2AK2Q8NG84 335 aa7.84□□□□□ -1.15
CD47-204ENST00000471694 LMO3Q8TAP4 145 aa7.84□□□□□ -1.15
CD47-204ENST00000471694 BORCS6Q96GS4 357 aa7.84□□□□□ -1.15
CD47-204ENST00000471694 MED20Q9H944 212 aa7.84□□□□□ -1.15
CD47-204ENST00000471694 AMDHD2Q9Y303 409 aa7.84□□□□□ -1.15
CD47-204ENST00000471694 RBMX2Q9Y388 322 aaKnown RBP7.84□□□□□ -1.15
CD47-204ENST00000471694 A0A1B0GWA3 101 aa7.83□□□□□ -1.16
CD47-204ENST00000471694 SNCGO76070 127 aa7.83□□□□□ -1.16
CD47-204ENST00000471694 PRRX1P54821 245 aa7.83□□□□□ -1.16
CD47-204ENST00000471694 RHOBP62745 196 aa7.83□□□□□ -1.16
CD47-204ENST00000471694 UBE2IP63279 158 aaKnown RBP7.83□□□□□ -1.16
CD47-204ENST00000471694 PGGHGQ32M88 737 aa7.83□□□□□ -1.16
CD47-204ENST00000471694 CLVS2Q5SYC1 327 aa7.83□□□□□ -1.16
CD47-204ENST00000471694 LPCAT3Q6P1A2 487 aa7.83□□□□□ -1.16
CD47-204ENST00000471694 LSRQ86X29 649 aaPredicted RBP7.83□□□□□ -1.16
CD47-204ENST00000471694 ZNF679Q8IYX0 411 aa7.83□□□□□ -1.16
CD47-204ENST00000471694 NPEPL1Q8NDH3 523 aa7.83□□□□□ -1.16
CD47-204ENST00000471694 ZDHHC19Q8WVZ1 309 aaPredicted RBP7.83□□□□□ -1.16
CD47-204ENST00000471694 MUL1Q969V5 352 aa7.83□□□□□ -1.16
CD47-204ENST00000471694 STACQ99469 402 aa7.83□□□□□ -1.16
CD47-204ENST00000471694 GLIPR2Q9H4G4 154 aa7.83□□□□□ -1.16
CD47-204ENST00000471694 SMCO4Q9NRQ5 59 aa7.83□□□□□ -1.16
CD47-204ENST00000471694 PLSCR3Q9NRY6 295 aa7.83□□□□□ -1.16
CD47-204ENST00000471694 ZDHHC18Q9NUE0 388 aa7.83□□□□□ -1.16
CD47-204ENST00000471694 TREM2Q9NZC2 230 aa7.83□□□□□ -1.16
CD47-204ENST00000471694 PRKNO60260 465 aaPredicted RBP7.83□□□□□ -1.16
CD47-204ENST00000471694 ATXN1LP0C7T5 689 aaKnown RBP7.83□□□□□ -1.16
CD47-204ENST00000471694 ZFP36L2P47974 494 aaKnown RBP7.83□□□□□ -1.16
CD47-204ENST00000471694 KLRB1Q12918 225 aa7.83□□□□□ -1.16
CD47-204ENST00000471694 B3GLCTQ6Y288 498 aa7.83□□□□□ -1.16
CD47-204ENST00000471694 OR10G3Q8NGC4 313 aa7.83□□□□□ -1.16
CD47-204ENST00000471694 ARRDC2Q8TBH0 407 aa7.83□□□□□ -1.16
CD47-204ENST00000471694 RBM14Q96PK6 669 aaKnown RBP7.83□□□□□ -1.16
CD47-204ENST00000471694 SMIM3Q9BZL3 60 aa7.83□□□□□ -1.16
CD47-204ENST00000471694 RABL2AQ9UBK7 228 aaPredicted RBP7.83□□□□□ -1.16
CD47-204ENST00000471694 RABL2BQ9UNT1 228 aa7.83□□□□□ -1.16
CD47-204ENST00000471694 F6UZH7 168 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms