RNA–Protein interactions for RNA: ENST00000471307.6

CCDC39-202, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-202ENST00000471307 MTTPP55157 894 aa4.07□□□□□ -1.76
CCDC39-202ENST00000471307 ERVPABLB-1P60509 514 aa4.07□□□□□ -1.76
CCDC39-202ENST00000471307 TBPL1P62380 186 aa4.07□□□□□ -1.76
CCDC39-202ENST00000471307 IRF8Q02556 426 aa4.07□□□□□ -1.76
CCDC39-202ENST00000471307 RELAQ04206 551 aa4.07□□□□□ -1.76
CCDC39-202ENST00000471307 CHIT1Q13231 466 aa4.07□□□□□ -1.76
CCDC39-202ENST00000471307 DOC2AQ14183 400 aa4.07□□□□□ -1.76
CCDC39-202ENST00000471307 FASTKQ14296 549 aaKnown RBP4.07□□□□□ -1.76
CCDC39-202ENST00000471307 CARTPTQ16568 116 aa4.07□□□□□ -1.76
CCDC39-202ENST00000471307 SLC5A12Q1EHB4 618 aa4.07□□□□□ -1.76
CCDC39-202ENST00000471307 LRRC37A5PQ49AS3 106 aa4.07□□□□□ -1.76
CCDC39-202ENST00000471307 GGTA1PQ4G0N0 100 aa4.07□□□□□ -1.76
CCDC39-202ENST00000471307 C14orf28Q4W4Y0 310 aa4.07□□□□□ -1.76
CCDC39-202ENST00000471307 FBXO48Q5FWF7 155 aa4.07□□□□□ -1.76
CCDC39-202ENST00000471307 VWA2Q5GFL6 755 aa4.07□□□□□ -1.76
CCDC39-202ENST00000471307 PAGE2BQ5JRK9 111 aa4.07□□□□□ -1.76
CCDC39-202ENST00000471307 UTF1Q5T230 341 aa4.07□□□□□ -1.76
CCDC39-202ENST00000471307 METTL21CQ5VZV1 264 aa4.07□□□□□ -1.76
CCDC39-202ENST00000471307 PODNL1Q6PEZ8 512 aa4.07□□□□□ -1.76
CCDC39-202ENST00000471307 EPGNQ6UW88 154 aa4.07□□□□□ -1.76
CCDC39-202ENST00000471307 ARSKQ6UWY0 536 aa4.07□□□□□ -1.76
CCDC39-202ENST00000471307 NHLRC1Q6VVB1 395 aa4.07□□□□□ -1.76
CCDC39-202ENST00000471307 B3GLCTQ6Y288 498 aa4.07□□□□□ -1.76
CCDC39-202ENST00000471307 RPS27LQ71UM5 84 aaKnown RBP4.07□□□□□ -1.76
CCDC39-202ENST00000471307 SYVN1Q86TM6 617 aa4.07□□□□□ -1.76
CCDC39-202ENST00000471307 MEX3DQ86XN8 651 aaKnown RBP4.07□□□□□ -1.76
CCDC39-202ENST00000471307 HIPK1Q86Z02 1210 aa4.07□□□□□ -1.76
CCDC39-202ENST00000471307 TMEM126BQ8IUX1 230 aa4.07□□□□□ -1.76
CCDC39-202ENST00000471307 TBC1D19Q8N5T2 526 aa4.07□□□□□ -1.76
CCDC39-202ENST00000471307 ZNF781Q8N8C0 355 aa4.07□□□□□ -1.76
CCDC39-202ENST00000471307 LINC01555Q8NAE3 123 aa4.07□□□□□ -1.76
CCDC39-202ENST00000471307 OR4F6Q8NGB9 312 aa4.07□□□□□ -1.76
CCDC39-202ENST00000471307 OR1B1Q8NGR6 318 aa4.07□□□□□ -1.76
CCDC39-202ENST00000471307 OR2A1Q8NGT9 310 aa4.07□□□□□ -1.76
CCDC39-202ENST00000471307 OR4C6Q8NH72 309 aa4.07□□□□□ -1.76
CCDC39-202ENST00000471307 SLC5A11Q8WWX8 675 aa4.07□□□□□ -1.76
CCDC39-202ENST00000471307 PATE1Q8WXA2 126 aa4.07□□□□□ -1.76
CCDC39-202ENST00000471307 NEIL2Q969S2 332 aa4.07□□□□□ -1.76
CCDC39-202ENST00000471307 UBE2E3Q969T4 207 aa4.07□□□□□ -1.76
CCDC39-202ENST00000471307 TSSK2Q96PF2 358 aa4.07□□□□□ -1.76
CCDC39-202ENST00000471307 AIF1LQ9BQI0 150 aa4.07□□□□□ -1.76
CCDC39-202ENST00000471307 EFCAB11Q9BUY7 163 aa4.07□□□□□ -1.76
CCDC39-202ENST00000471307 TPPP3Q9BW30 176 aa4.07□□□□□ -1.76
CCDC39-202ENST00000471307 SHCBP1LQ9BZQ2 653 aa4.07□□□□□ -1.76
CCDC39-202ENST00000471307 RAB33BQ9H082 229 aa4.07□□□□□ -1.76
CCDC39-202ENST00000471307 FAM107BQ9H098 131 aa4.07□□□□□ -1.76
CCDC39-202ENST00000471307 XKR8Q9H6D3 395 aa4.07□□□□□ -1.76
CCDC39-202ENST00000471307 NT5DC2Q9H857 520 aa4.07□□□□□ -1.76
CCDC39-202ENST00000471307 ACTR8Q9H981 624 aa4.07□□□□□ -1.76
CCDC39-202ENST00000471307 ABCB10Q9NRK6 738 aa4.07□□□□□ -1.76
CCDC39-202ENST00000471307 ZCCHC3Q9NUD5 404 aaKnown RBP4.07□□□□□ -1.76
CCDC39-202ENST00000471307 HRASLS2Q9NWW9 162 aa4.07□□□□□ -1.76
CCDC39-202ENST00000471307 CIDEBQ9UHD4 219 aa4.07□□□□□ -1.76
CCDC39-202ENST00000471307 ZNF225Q9UK10 706 aa4.07□□□□□ -1.76
CCDC39-202ENST00000471307 ZNF256Q9Y2P7 627 aaPredicted RBP4.07□□□□□ -1.76
CCDC39-202ENST00000471307 ARL2BPQ9Y2Y0 163 aa4.07□□□□□ -1.76
CCDC39-202ENST00000471307 RNF11Q9Y3C5 154 aa4.07□□□□□ -1.76
CCDC39-202ENST00000471307 DNAJC15Q9Y5T4 150 aa4.07□□□□□ -1.76
CCDC39-202ENST00000471307 USH1CQ9Y6N9 552 aa4.07□□□□□ -1.76
CCDC39-202ENST00000471307 GPR179Q6PRD1 2367 aa4.07□□□□□ -1.76
CCDC39-202ENST00000471307 ASXL3Q9C0F0 2248 aa4.07□□□□□ -1.76
CCDC39-202ENST00000471307 RP1P56715 2156 aa4.06□□□□□ -1.76
CCDC39-202ENST00000471307 PCDH15Q96QU1 1955 aa4.06□□□□□ -1.76
CCDC39-202ENST00000471307 KCNE1BA0A087WTH5 132 aa4.06□□□□□ -1.76
CCDC39-202ENST00000471307 A0A0G2JND7 137 aa4.06□□□□□ -1.76
CCDC39-202ENST00000471307 C5orf51A6NDU8 294 aa4.06□□□□□ -1.76
CCDC39-202ENST00000471307 E7EQ34 232 aa4.06□□□□□ -1.76
CCDC39-202ENST00000471307 SLC28A1O00337 649 aa4.06□□□□□ -1.76
CCDC39-202ENST00000471307 FOXE1O00358 373 aaPredicted RBP4.06□□□□□ -1.76
CCDC39-202ENST00000471307 MANBAO00462 879 aa4.06□□□□□ -1.76
CCDC39-202ENST00000471307 BTN3A3O00478 584 aa4.06□□□□□ -1.76
CCDC39-202ENST00000471307 OR6B1O95007 311 aa4.06□□□□□ -1.76
CCDC39-202ENST00000471307 DIRAS3O95661 229 aa4.06□□□□□ -1.76
CCDC39-202ENST00000471307 PROS1P07225 676 aa4.06□□□□□ -1.76
CCDC39-202ENST00000471307 CAPN1P07384 714 aa4.06□□□□□ -1.76
CCDC39-202ENST00000471307 ACP1P24666 158 aa4.06□□□□□ -1.76
CCDC39-202ENST00000471307 PRDX3P30048 256 aaKnown RBP4.06□□□□□ -1.76
CCDC39-202ENST00000471307 SERPINB1P30740 379 aa4.06□□□□□ -1.76
CCDC39-202ENST00000471307 NBL1P41271 181 aa4.06□□□□□ -1.76
CCDC39-202ENST00000471307 DUSP3P51452 185 aaPredicted RBP4.06□□□□□ -1.76
CCDC39-202ENST00000471307 AQP5P55064 265 aa4.06□□□□□ -1.76
CCDC39-202ENST00000471307 SSTP61278 116 aa4.06□□□□□ -1.76
CCDC39-202ENST00000471307 IFT88Q13099 833 aa4.06□□□□□ -1.76
CCDC39-202ENST00000471307 PDE7AQ13946 482 aa4.06□□□□□ -1.76
CCDC39-202ENST00000471307 CLPPQ16740 277 aaPredicted RBP4.06□□□□□ -1.76
CCDC39-202ENST00000471307 TMEM44Q2T9K0 475 aa4.06□□□□□ -1.76
CCDC39-202ENST00000471307 ATAD3BQ5T9A4 648 aa4.06□□□□□ -1.76
CCDC39-202ENST00000471307 CLEC6AQ6EIG7 209 aa4.06□□□□□ -1.76
CCDC39-202ENST00000471307 CGB2Q6NT52 195 aa4.06□□□□□ -1.76
CCDC39-202ENST00000471307 SLC25A24Q6NUK1 477 aa4.06□□□□□ -1.76
CCDC39-202ENST00000471307 MED27Q6P2C8 311 aa4.06□□□□□ -1.76
CCDC39-202ENST00000471307 SPESP1Q6UW49 350 aa4.06□□□□□ -1.76
CCDC39-202ENST00000471307 TMIGD1Q6UXZ0 262 aa4.06□□□□□ -1.76
CCDC39-202ENST00000471307 OOSP2Q86WS3 158 aa4.06□□□□□ -1.76
CCDC39-202ENST00000471307 AQP12AQ8IXF9 295 aa4.06□□□□□ -1.76
CCDC39-202ENST00000471307 FBXW8Q8N3Y1 598 aa4.06□□□□□ -1.76
CCDC39-202ENST00000471307 C2orf73Q8N5S3 287 aaPredicted RBP4.06□□□□□ -1.76
CCDC39-202ENST00000471307 EID2Q8N6I1 236 aa4.06□□□□□ -1.76
CCDC39-202ENST00000471307 CLEC1AQ8NC01 280 aa4.06□□□□□ -1.76
CCDC39-202ENST00000471307 CCDC197Q8NCU1 140 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms