RNA–Protein interactions for RNA: ENST00000471188.5

VPS50-210, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,254 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-210ENST00000471188 MRPS33Q9Y291 106 aaKnown RBP3.85□□□□□ -1.79
VPS50-210ENST00000471188 PARP14Q460N5 1801 aa3.85□□□□□ -1.79
VPS50-210ENST00000471188 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.85□□□□□ -1.79
VPS50-210ENST00000471188 H7BY64 318 aa3.85□□□□□ -1.79
VPS50-210ENST00000471188 WNT10BO00744 389 aa3.85□□□□□ -1.79
VPS50-210ENST00000471188 PTGESO14684 152 aa3.85□□□□□ -1.79
VPS50-210ENST00000471188 ZNF749O43361 778 aa3.85□□□□□ -1.79
VPS50-210ENST00000471188 HIST1H2BKO60814 126 aa3.85□□□□□ -1.79
VPS50-210ENST00000471188 PTBP3O95758 552 aaKnown RBP3.85□□□□□ -1.79
VPS50-210ENST00000471188 TBX6O95947 436 aaPredicted RBP3.85□□□□□ -1.79
VPS50-210ENST00000471188 CYB5AP00167 134 aa3.85□□□□□ -1.79
VPS50-210ENST00000471188 HIST1H2BJP06899 126 aa3.85□□□□□ -1.79
VPS50-210ENST00000471188 CTSLP07711 333 aa3.85□□□□□ -1.79
VPS50-210ENST00000471188 FAM157CP0CG43 387 aa3.85□□□□□ -1.79
VPS50-210ENST00000471188 ELNP15502 786 aa3.85□□□□□ -1.79
VPS50-210ENST00000471188 ZNF28P17035 718 aa3.85□□□□□ -1.79
VPS50-210ENST00000471188 TACR2P21452 398 aa3.85□□□□□ -1.79
VPS50-210ENST00000471188 HIST1H2BOP23527 126 aa3.85□□□□□ -1.79
VPS50-210ENST00000471188 GRPRP30550 384 aa3.85□□□□□ -1.79
VPS50-210ENST00000471188 HIST1H2BBP33778 126 aa3.85□□□□□ -1.79
VPS50-210ENST00000471188 PPM1AP35813 382 aa3.85□□□□□ -1.79
VPS50-210ENST00000471188 FXYD6P3P58550 94 aa3.85□□□□□ -1.79
VPS50-210ENST00000471188 HIST1H2BDP58876 126 aa3.85□□□□□ -1.79
VPS50-210ENST00000471188 HIST1H2BCP62807 126 aa3.85□□□□□ -1.79
VPS50-210ENST00000471188 SIRPAP78324 504 aa3.85□□□□□ -1.79
VPS50-210ENST00000471188 ZNF85Q03923 595 aa3.85□□□□□ -1.79
VPS50-210ENST00000471188 LASP1Q14847 261 aaKnown RBP3.85□□□□□ -1.79
VPS50-210ENST00000471188 CDK5R1Q15078 307 aa3.85□□□□□ -1.79
VPS50-210ENST00000471188 UBE2V2Q15819 145 aa3.85□□□□□ -1.79
VPS50-210ENST00000471188 FAM189A2Q15884 450 aa3.85□□□□□ -1.79
VPS50-210ENST00000471188 GUK1Q16774 197 aa3.85□□□□□ -1.79
VPS50-210ENST00000471188 HIST2H2BEQ16778 126 aa3.85□□□□□ -1.79
VPS50-210ENST00000471188 PRSS53Q2L4Q9 553 aa3.85□□□□□ -1.79
VPS50-210ENST00000471188 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.85□□□□□ -1.79
VPS50-210ENST00000471188 NBPF12Q5TAG4 269 aaPredicted RBP3.85□□□□□ -1.79
VPS50-210ENST00000471188 RNF219Q5W0B1 726 aaPredicted RBP3.85□□□□□ -1.79
VPS50-210ENST00000471188 GRHL2Q6ISB3 625 aa3.85□□□□□ -1.79
VPS50-210ENST00000471188 ZNF705AQ6ZN79 300 aaPredicted RBP3.85□□□□□ -1.79
VPS50-210ENST00000471188 RTL10Q7L3V2 364 aa3.85□□□□□ -1.79
VPS50-210ENST00000471188 ZC3HAV1Q7Z2W4 902 aaKnown RBP3.85□□□□□ -1.79
VPS50-210ENST00000471188 ZNF227Q86WZ6 799 aa3.85□□□□□ -1.79
VPS50-210ENST00000471188 GABRG1Q8N1C3 465 aa3.85□□□□□ -1.79
VPS50-210ENST00000471188 HIST3H2BBQ8N257 126 aa3.85□□□□□ -1.79
VPS50-210ENST00000471188 CPEB3Q8NE35 698 aaKnown RBP3.85□□□□□ -1.79
VPS50-210ENST00000471188 OR51D1Q8NGF3 324 aa3.85□□□□□ -1.79
VPS50-210ENST00000471188 OR51A7Q8NH64 312 aa3.85□□□□□ -1.79
VPS50-210ENST00000471188 OR4C6Q8NH72 309 aa3.85□□□□□ -1.79
VPS50-210ENST00000471188 NEK7Q8TDX7 302 aa3.85□□□□□ -1.79
VPS50-210ENST00000471188 TMEM255BQ8WV15 326 aa3.85□□□□□ -1.79
VPS50-210ENST00000471188 DNAJB3Q8WWF6 145 aa3.85□□□□□ -1.79
VPS50-210ENST00000471188 ASB11Q8WXH4 323 aa3.85□□□□□ -1.79
VPS50-210ENST00000471188 SMPDL3AQ92484 453 aa3.85□□□□□ -1.79
VPS50-210ENST00000471188 TFGQ92734 400 aaPredicted RBP3.85□□□□□ -1.79
VPS50-210ENST00000471188 HIST1H2BHQ93079 126 aa3.85□□□□□ -1.79
VPS50-210ENST00000471188 SAT2Q96F10 170 aaPredicted RBP3.85□□□□□ -1.79
VPS50-210ENST00000471188 PELI1Q96FA3 418 aa3.85□□□□□ -1.79
VPS50-210ENST00000471188 SNX22Q96L94 193 aa3.85□□□□□ -1.79
VPS50-210ENST00000471188 NOL4LQ96MY1 436 aaPredicted RBP3.85□□□□□ -1.79
VPS50-210ENST00000471188 PTCHD1Q96NR3 888 aa3.85□□□□□ -1.79
VPS50-210ENST00000471188 CAMK1GQ96NX5 476 aa3.85□□□□□ -1.79
VPS50-210ENST00000471188 CD180Q99467 661 aa3.85□□□□□ -1.79
VPS50-210ENST00000471188 TIMP4Q99727 224 aa3.85□□□□□ -1.79
VPS50-210ENST00000471188 HIST1H2BNQ99877 126 aa3.85□□□□□ -1.79
VPS50-210ENST00000471188 HIST1H2BMQ99879 126 aa3.85□□□□□ -1.79
VPS50-210ENST00000471188 GPR174Q9BXC1 333 aa3.85□□□□□ -1.79
VPS50-210ENST00000471188 DUSP15Q9H1R2 295 aaPredicted RBP3.85□□□□□ -1.79
VPS50-210ENST00000471188 OR51B6Q9H340 312 aa3.85□□□□□ -1.79
VPS50-210ENST00000471188 NELFAQ9H3P2 528 aa3.85□□□□□ -1.79
VPS50-210ENST00000471188 TUBA4BQ9H853 241 aa3.85□□□□□ -1.79
VPS50-210ENST00000471188 BRF2Q9HAW0 419 aa3.85□□□□□ -1.79
VPS50-210ENST00000471188 A4GALTQ9NPC4 353 aa3.85□□□□□ -1.79
VPS50-210ENST00000471188 TMEM100Q9NV29 134 aa3.85□□□□□ -1.79
VPS50-210ENST00000471188 KLHL28Q9NXS3 571 aa3.85□□□□□ -1.79
VPS50-210ENST00000471188 GSKIPQ9P0R6 139 aa3.85□□□□□ -1.79
VPS50-210ENST00000471188 TAAR2Q9P1P5 351 aa3.85□□□□□ -1.79
VPS50-210ENST00000471188 STEAP1Q9UHE8 339 aa3.85□□□□□ -1.79
VPS50-210ENST00000471188 CD84Q9UIB8 345 aa3.85□□□□□ -1.79
VPS50-210ENST00000471188 WDR45Q9Y484 360 aa3.85□□□□□ -1.79
VPS50-210ENST00000471188 ZFP37Q9Y6Q3 630 aaPredicted RBP3.85□□□□□ -1.79
VPS50-210ENST00000471188 PRRC2BQ5JSZ5 2229 aaKnown RBP3.85□□□□□ -1.79
VPS50-210ENST00000471188 HEATR5AQ86XA9 2040 aa3.85□□□□□ -1.79
VPS50-210ENST00000471188 DNAH12Q6ZR08 3092 aa3.84□□□□□ -1.79
VPS50-210ENST00000471188 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.84□□□□□ -1.79
VPS50-210ENST00000471188 A0A0G2JN53 185 aa3.84□□□□□ -1.79
VPS50-210ENST00000471188 MED19A0JLT2 244 aaPredicted RBP3.84□□□□□ -1.79
VPS50-210ENST00000471188 TVP23AA6NH52 213 aa3.84□□□□□ -1.79
VPS50-210ENST00000471188 MSGN1A6NI15 193 aa3.84□□□□□ -1.79
VPS50-210ENST00000471188 OR2AG2A6NM03 316 aa3.84□□□□□ -1.79
VPS50-210ENST00000471188 NPIPB8E9PQR5 432 aa3.84□□□□□ -1.79
VPS50-210ENST00000471188 H0YIV9 168 aa3.84□□□□□ -1.79
VPS50-210ENST00000471188 GAPDHSO14556 408 aaPredicted RBP3.84□□□□□ -1.79
VPS50-210ENST00000471188 CDC42EP2O14613 210 aa3.84□□□□□ -1.79
VPS50-210ENST00000471188 PAPLNO95428 1278 aa3.84□□□□□ -1.79
VPS50-210ENST00000471188 MBPP02686 304 aaPredicted RBP3.84□□□□□ -1.79
VPS50-210ENST00000471188 CD5P06127 495 aa3.84□□□□□ -1.79
VPS50-210ENST00000471188 HTR2CP28335 458 aa3.84□□□□□ -1.79
VPS50-210ENST00000471188 TEAD1P28347 426 aa3.84□□□□□ -1.79
VPS50-210ENST00000471188 S100A7P31151 101 aa3.84□□□□□ -1.79
VPS50-210ENST00000471188 TAGLN2P37802 199 aaKnown RBP3.84□□□□□ -1.79
VPS50-210ENST00000471188 TNP2Q05952 138 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms