RNA–Protein interactions for RNA: ENST00000471181.6

BRCA1-210, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-210ENST00000471181 HES4Q9HCC6 221 aa6.37□□□□□ -1.39
BRCA1-210ENST00000471181 ZDHHC18Q9NUE0 388 aa6.37□□□□□ -1.39
BRCA1-210ENST00000471181 TO15178 435 aa6.37□□□□□ -1.39
BRCA1-210ENST00000471181 EPHA2P29317 976 aa6.37□□□□□ -1.39
BRCA1-210ENST00000471181 SRP14P37108 136 aaKnown RBP6.37□□□□□ -1.39
BRCA1-210ENST00000471181 NKX2-1P43699 371 aaPredicted RBP6.37□□□□□ -1.39
BRCA1-210ENST00000471181 CCR6P51684 374 aa6.37□□□□□ -1.39
BRCA1-210ENST00000471181 SLC35A1P78382 337 aa6.37□□□□□ -1.39
BRCA1-210ENST00000471181 SLC25A11Q02978 314 aaKnown RBP6.37□□□□□ -1.39
BRCA1-210ENST00000471181 RUNX3Q13761 415 aa6.37□□□□□ -1.39
BRCA1-210ENST00000471181 CEACAM7Q14002 265 aa6.37□□□□□ -1.39
BRCA1-210ENST00000471181 SYT6Q5T7P8 510 aaPredicted RBP6.37□□□□□ -1.39
BRCA1-210ENST00000471181 FRMPD2BQ6IN97 320 aa6.37□□□□□ -1.39
BRCA1-210ENST00000471181 DPPA4Q7L190 304 aa6.37□□□□□ -1.39
BRCA1-210ENST00000471181 APCDD1Q8J025 514 aa6.37□□□□□ -1.39
BRCA1-210ENST00000471181 FAM71CQ8NEG0 241 aa6.37□□□□□ -1.39
BRCA1-210ENST00000471181 GPX7Q96SL4 187 aaPredicted RBP6.37□□□□□ -1.39
BRCA1-210ENST00000471181 GABARAPL1Q9H0R8 117 aa6.37□□□□□ -1.39
BRCA1-210ENST00000471181 CRLF2Q9HC73 371 aa6.37□□□□□ -1.39
BRCA1-210ENST00000471181 INPP5EQ9NRR6 644 aa6.37□□□□□ -1.39
BRCA1-210ENST00000471181 ONECUT1Q9UBC0 465 aa6.37□□□□□ -1.39
BRCA1-210ENST00000471181 LTN1O94822 1766 aa6.36□□□□□ -1.39
BRCA1-210ENST00000471181 TMEM212A6NML5 194 aa6.36□□□□□ -1.39
BRCA1-210ENST00000471181 SPINK4O60575 86 aa6.36□□□□□ -1.39
BRCA1-210ENST00000471181 ZNF623O75123 536 aa6.36□□□□□ -1.39
BRCA1-210ENST00000471181 STAG3L2P0CL84 134 aa6.36□□□□□ -1.39
BRCA1-210ENST00000471181 PCGF2P35227 344 aa6.36□□□□□ -1.39
BRCA1-210ENST00000471181 GMPRP36959 345 aa6.36□□□□□ -1.39
BRCA1-210ENST00000471181 MMP12P39900 470 aa6.36□□□□□ -1.39
BRCA1-210ENST00000471181 PCBP3P57721 371 aaKnown RBP6.36□□□□□ -1.39
BRCA1-210ENST00000471181 RPS25P62851 125 aaKnown RBP6.36□□□□□ -1.39
BRCA1-210ENST00000471181 PLAURQ03405 335 aa6.36□□□□□ -1.39
BRCA1-210ENST00000471181 KEAP1Q14145 624 aa6.36□□□□□ -1.39
BRCA1-210ENST00000471181 EMC10Q5UCC4 262 aa6.36□□□□□ -1.39
BRCA1-210ENST00000471181 DCAF12L1Q5VU92 463 aa6.36□□□□□ -1.39
BRCA1-210ENST00000471181 GLIPR1L1Q6UWM5 242 aa6.36□□□□□ -1.39
BRCA1-210ENST00000471181 DOK3Q7L591 496 aa6.36□□□□□ -1.39
BRCA1-210ENST00000471181 TGIF2LYQ8IUE0 185 aa6.36□□□□□ -1.39
BRCA1-210ENST00000471181 SLC38A6Q8IZM9 456 aa6.36□□□□□ -1.39
BRCA1-210ENST00000471181 ACVR1CQ8NER5 493 aa6.36□□□□□ -1.39
BRCA1-210ENST00000471181 LFNGQ8NES3 379 aa6.36□□□□□ -1.39
BRCA1-210ENST00000471181 OR5M1Q8NGP8 315 aa6.36□□□□□ -1.39
BRCA1-210ENST00000471181 ACY3Q96HD9 319 aa6.36□□□□□ -1.39
BRCA1-210ENST00000471181 MRGPRX2Q96LB1 330 aa6.36□□□□□ -1.39
BRCA1-210ENST00000471181 WDR83Q9BRX9 315 aaKnown RBP6.36□□□□□ -1.39
BRCA1-210ENST00000471181 GPR173Q9NS66 373 aa6.36□□□□□ -1.39
BRCA1-210ENST00000471181 SRPK3Q9UPE1 567 aa6.36□□□□□ -1.39
BRCA1-210ENST00000471181 LRRC37A3O60309 1634 aa6.36□□□□□ -1.39
BRCA1-210ENST00000471181 AHDC1Q5TGY3 1603 aaPredicted RBP6.36□□□□□ -1.39
BRCA1-210ENST00000471181 A0A1W2PNV4 684 aa6.36□□□□□ -1.39
BRCA1-210ENST00000471181 A0A1W2PPQ1 181 aa6.36□□□□□ -1.39
BRCA1-210ENST00000471181 J3KTA2 159 aa6.36□□□□□ -1.39
BRCA1-210ENST00000471181 C1orf105O95561 183 aa6.36□□□□□ -1.39
BRCA1-210ENST00000471181 PRSS56P0CW18 603 aa6.36□□□□□ -1.39
BRCA1-210ENST00000471181 HOXA10P31260 410 aaPredicted RBP6.36□□□□□ -1.39
BRCA1-210ENST00000471181 ZNF133P52736 654 aaPredicted RBP6.36□□□□□ -1.39
BRCA1-210ENST00000471181 KIAA1024LP59773 190 aa6.36□□□□□ -1.39
BRCA1-210ENST00000471181 PMP22Q01453 160 aa6.36□□□□□ -1.39
BRCA1-210ENST00000471181 RELAQ04206 551 aa6.36□□□□□ -1.39
BRCA1-210ENST00000471181 IQCJQ1A5X6 159 aa6.36□□□□□ -1.39
BRCA1-210ENST00000471181 PROX2Q3B8N5 592 aa6.36□□□□□ -1.39
BRCA1-210ENST00000471181 OR2T2Q6IF00 324 aa6.36□□□□□ -1.39
BRCA1-210ENST00000471181 SPNS3Q6ZMD2 512 aa6.36□□□□□ -1.39
BRCA1-210ENST00000471181 ETV3LQ6ZN32 361 aa6.36□□□□□ -1.39
BRCA1-210ENST00000471181 VASH2Q86V25 355 aa6.36□□□□□ -1.39
BRCA1-210ENST00000471181 GON7Q9BXV9 100 aa6.36□□□□□ -1.39
BRCA1-210ENST00000471181 ZNF256Q9Y2P7 627 aaPredicted RBP6.36□□□□□ -1.39
BRCA1-210ENST00000471181 UFC1Q9Y3C8 167 aa6.36□□□□□ -1.39
BRCA1-210ENST00000471181 USP31Q70CQ4 1352 aa6.36□□□□□ -1.39
BRCA1-210ENST00000471181 PLRG1O43660 514 aaKnown RBP6.36□□□□□ -1.39
BRCA1-210ENST00000471181 SCRG1O75711 98 aa6.36□□□□□ -1.39
BRCA1-210ENST00000471181 GLAP06280 429 aa6.36□□□□□ -1.39
BRCA1-210ENST00000471181 IL4RP24394 825 aa6.36□□□□□ -1.39
BRCA1-210ENST00000471181 TNFSF8P32971 234 aa6.36□□□□□ -1.39
BRCA1-210ENST00000471181 RRADP55042 308 aa6.36□□□□□ -1.39
BRCA1-210ENST00000471181 GPR17Q13304 367 aa6.36□□□□□ -1.39
BRCA1-210ENST00000471181 ELAVL3Q14576 367 aaKnown RBP6.36□□□□□ -1.39
BRCA1-210ENST00000471181 EIF4HQ15056 248 aaKnown RBP6.36□□□□□ -1.39
BRCA1-210ENST00000471181 B3GNTL1Q67FW5 361 aaPredicted RBP6.36□□□□□ -1.39
BRCA1-210ENST00000471181 B3GNT8Q7Z7M8 397 aa6.36□□□□□ -1.39
BRCA1-210ENST00000471181 CDH26Q8IXH8 852 aa6.36□□□□□ -1.39
BRCA1-210ENST00000471181 SLC22A24Q8N4F4 322 aa6.36□□□□□ -1.39
BRCA1-210ENST00000471181 RXFP4Q8TDU9 374 aa6.36□□□□□ -1.39
BRCA1-210ENST00000471181 ZNF516Q92618 1163 aa6.36□□□□□ -1.39
BRCA1-210ENST00000471181 IGSF8Q969P0 613 aa6.36□□□□□ -1.39
BRCA1-210ENST00000471181 PIGQQ9BRB3 760 aa6.36□□□□□ -1.39
BRCA1-210ENST00000471181 APOOQ9BUR5 198 aa6.36□□□□□ -1.39
BRCA1-210ENST00000471181 COMMD5Q9GZQ3 224 aa6.36□□□□□ -1.39
BRCA1-210ENST00000471181 WDR61Q9GZS3 305 aaKnown RBP6.36□□□□□ -1.39
BRCA1-210ENST00000471181 AAMDCQ9H7C9 122 aa6.36□□□□□ -1.39
BRCA1-210ENST00000471181 DMRT3Q9NQL9 472 aa6.36□□□□□ -1.39
BRCA1-210ENST00000471181 CSAG2Q9Y5P2 127 aa6.36□□□□□ -1.39
BRCA1-210ENST00000471181 TRAPPC1Q9Y5R8 145 aa6.36□□□□□ -1.39
BRCA1-210ENST00000471181 ANKRD61A6NGH8 418 aa6.36□□□□□ -1.39
BRCA1-210ENST00000471181 GALR3O60755 368 aaPredicted RBP6.36□□□□□ -1.39
BRCA1-210ENST00000471181 HSBP1O75506 76 aa6.36□□□□□ -1.39
BRCA1-210ENST00000471181 SEMG1P04279 462 aa6.36□□□□□ -1.39
BRCA1-210ENST00000471181 PVRP15151 417 aa6.36□□□□□ -1.39
BRCA1-210ENST00000471181 ADRA2CP18825 462 aa6.36□□□□□ -1.39
BRCA1-210ENST00000471181 TCN2P20062 427 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms