RNA–Protein interactions for RNA: ENST00000470278.5

CDC42SE1-203, Transcript of CDC42 small effector 1, humanhuman

TSL 5

Gene CDC42SE1, Length 939 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-203ENST00000470278 CRABP1P29762 137 aa13.06□□□□□ -0.32
CDC42SE1-203ENST00000470278 GIPRP48546 466 aa13.06□□□□□ -0.32
CDC42SE1-203ENST00000470278 CRISP1P54107 249 aa13.06□□□□□ -0.32
CDC42SE1-203ENST00000470278 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.06□□□□□ -0.32
CDC42SE1-203ENST00000470278 LEG1Q6P5S2 330 aa13.06□□□□□ -0.32
CDC42SE1-203ENST00000470278 DNM1P34Q6PK57 102 aa13.06□□□□□ -0.32
CDC42SE1-203ENST00000470278 ZNF813Q6ZN06 617 aa13.06□□□□□ -0.32
CDC42SE1-203ENST00000470278 SLC22A24Q8N4F4 322 aa13.06□□□□□ -0.32
CDC42SE1-203ENST00000470278 CBR4Q8N4T8 237 aa13.06□□□□□ -0.32
CDC42SE1-203ENST00000470278 FAM169BQ8N8A8 192 aa13.06□□□□□ -0.32
CDC42SE1-203ENST00000470278 SDR9C7Q8NEX9 313 aa13.06□□□□□ -0.32
CDC42SE1-203ENST00000470278 NABP1Q96AH0 204 aa13.06□□□□□ -0.32
CDC42SE1-203ENST00000470278 NMNAT3Q96T66 252 aa13.06□□□□□ -0.32
CDC42SE1-203ENST00000470278 DDOQ99489 341 aa13.06□□□□□ -0.32
CDC42SE1-203ENST00000470278 RACGAP1Q9H0H5 632 aa13.06□□□□□ -0.32
CDC42SE1-203ENST00000470278 DCLRE1BQ9H816 532 aa13.06□□□□□ -0.32
CDC42SE1-203ENST00000470278 NGBQ9NPG2 151 aa13.06□□□□□ -0.32
CDC42SE1-203ENST00000470278 A0A096LPE4 126 aa13.05□□□□□ -0.32
CDC42SE1-203ENST00000470278 A0A1W2PPZ6 126 aa13.05□□□□□ -0.32
CDC42SE1-203ENST00000470278 FAM221AA4D161 298 aa13.05□□□□□ -0.32
CDC42SE1-203ENST00000470278 OR6C68A6NDL8 312 aa13.05□□□□□ -0.32
CDC42SE1-203ENST00000470278 A6NNC1 897 aa13.05□□□□□ -0.32
CDC42SE1-203ENST00000470278 RIIAD1A6NNX1 92 aa13.05□□□□□ -0.32
CDC42SE1-203ENST00000470278 RRP9O43818 475 aaKnown RBP13.05□□□□□ -0.32
CDC42SE1-203ENST00000470278 MITFO75030 526 aaPredicted RBP13.05□□□□□ -0.32
CDC42SE1-203ENST00000470278 SEC14L2O76054 403 aa13.05□□□□□ -0.32
CDC42SE1-203ENST00000470278 FARS2O95363 451 aaKnown RBP13.05□□□□□ -0.32
CDC42SE1-203ENST00000470278 BAG2O95816 211 aa13.05□□□□□ -0.32
CDC42SE1-203ENST00000470278 OR8G3PP0DMU2 310 aa13.05□□□□□ -0.32
CDC42SE1-203ENST00000470278 ZNF3P17036 446 aa13.05□□□□□ -0.32
CDC42SE1-203ENST00000470278 POU1F1P28069 291 aa13.05□□□□□ -0.32
CDC42SE1-203ENST00000470278 UBE2NP61088 152 aaKnown RBP13.05□□□□□ -0.32
CDC42SE1-203ENST00000470278 GINS1Q14691 196 aa13.05□□□□□ -0.32
CDC42SE1-203ENST00000470278 C3orf36Q3SXR2 165 aa13.05□□□□□ -0.32
CDC42SE1-203ENST00000470278 SLC35F1Q5T1Q4 408 aa13.05□□□□□ -0.32
CDC42SE1-203ENST00000470278 SPNS3Q6ZMD2 512 aa13.05□□□□□ -0.32
CDC42SE1-203ENST00000470278 ZNF771Q7L3S4 317 aaPredicted RBP13.05□□□□□ -0.32
CDC42SE1-203ENST00000470278 DPPA2Q7Z7J5 298 aa13.05□□□□□ -0.32
CDC42SE1-203ENST00000470278 ZBTB46Q86UZ6 589 aa13.05□□□□□ -0.32
CDC42SE1-203ENST00000470278 IQCF1Q8N6M8 205 aa13.05□□□□□ -0.32
CDC42SE1-203ENST00000470278 OR52E2Q8NGJ4 325 aa13.05□□□□□ -0.32
CDC42SE1-203ENST00000470278 OR52N5Q8NH56 324 aa13.05□□□□□ -0.32
CDC42SE1-203ENST00000470278 NANOS1Q8WY41 292 aaKnown RBP13.05□□□□□ -0.32
CDC42SE1-203ENST00000470278 EME1Q96AY2 570 aa13.05□□□□□ -0.32
CDC42SE1-203ENST00000470278 ZC3HAV1LQ96H79 300 aaKnown RBP13.05□□□□□ -0.32
CDC42SE1-203ENST00000470278 TEX12Q9BXU0 123 aa13.05□□□□□ -0.32
CDC42SE1-203ENST00000470278 PRRG3Q9BZD7 231 aa13.05□□□□□ -0.32
CDC42SE1-203ENST00000470278 NUAK2Q9H093 628 aa13.05□□□□□ -0.32
CDC42SE1-203ENST00000470278 SIAEQ9HAT2 523 aa13.05□□□□□ -0.32
CDC42SE1-203ENST00000470278 C8orf4Q9NR00 106 aa13.05□□□□□ -0.32
CDC42SE1-203ENST00000470278 CRNNQ9UBG3 495 aaPredicted RBP13.05□□□□□ -0.32
CDC42SE1-203ENST00000470278 FKBP7Q9Y680 259 aa13.05□□□□□ -0.32
CDC42SE1-203ENST00000470278 NSD1Q96L73 2696 aaPredicted RBP13.04□□□□□ -0.32
CDC42SE1-203ENST00000470278 VPS13CQ709C8 3753 aa13.04□□□□□ -0.32
CDC42SE1-203ENST00000470278 IGLV1-36A0A0B4J1U3 117 aa13.04□□□□□ -0.32
CDC42SE1-203ENST00000470278 ZAR1LA6NP61 321 aa13.04□□□□□ -0.32
CDC42SE1-203ENST00000470278 DEFB108AA8MXU0 73 aa13.04□□□□□ -0.32
CDC42SE1-203ENST00000470278 CASKO14936 926 aa13.04□□□□□ -0.32
CDC42SE1-203ENST00000470278 CASQ2O14958 399 aaPredicted RBP13.04□□□□□ -0.32
CDC42SE1-203ENST00000470278 SURF4O15260 269 aa13.04□□□□□ -0.32
CDC42SE1-203ENST00000470278 SLC16A7O60669 478 aa13.04□□□□□ -0.32
CDC42SE1-203ENST00000470278 KHDRBS3O75525 346 aaKnown RBP13.04□□□□□ -0.32
CDC42SE1-203ENST00000470278 UBL3O95164 117 aa13.04□□□□□ -0.32
CDC42SE1-203ENST00000470278 HMGN1P05114 100 aa13.04□□□□□ -0.32
CDC42SE1-203ENST00000470278 SSTR2P30874 369 aa13.04□□□□□ -0.32
CDC42SE1-203ENST00000470278 SLC25A1P53007 311 aa13.04□□□□□ -0.32
CDC42SE1-203ENST00000470278 NR1H2P55055 460 aa13.04□□□□□ -0.32
CDC42SE1-203ENST00000470278 CRMP1Q14194 572 aa13.04□□□□□ -0.32
CDC42SE1-203ENST00000470278 PTGES3Q15185 160 aaKnown RBP13.04□□□□□ -0.32
CDC42SE1-203ENST00000470278 BEX5Q5H9J7 111 aa13.04□□□□□ -0.32
CDC42SE1-203ENST00000470278 ACSM5Q6NUN0 579 aa13.04□□□□□ -0.32
CDC42SE1-203ENST00000470278 WFDC8Q8IUA0 241 aa13.04□□□□□ -0.32
CDC42SE1-203ENST00000470278 GLB1L2Q8IW92 636 aa13.04□□□□□ -0.32
CDC42SE1-203ENST00000470278 OR6V1Q8N148 313 aa13.04□□□□□ -0.32
CDC42SE1-203ENST00000470278 SLC37A3Q8NCC5 494 aa13.04□□□□□ -0.32
CDC42SE1-203ENST00000470278 NSMAFQ92636 917 aa13.04□□□□□ -0.32
CDC42SE1-203ENST00000470278 NMNAT2Q9BZQ4 307 aa13.04□□□□□ -0.32
CDC42SE1-203ENST00000470278 RPRD1BQ9NQG5 326 aaKnown RBP13.04□□□□□ -0.32
CDC42SE1-203ENST00000470278 B3GNT2Q9NY97 397 aa13.04□□□□□ -0.32
CDC42SE1-203ENST00000470278 ZNF224Q9NZL3 707 aa13.04□□□□□ -0.32
CDC42SE1-203ENST00000470278 NPAP1Q9NZP6 1156 aa13.04□□□□□ -0.32
CDC42SE1-203ENST00000470278 ITGB1BP2Q9UKP3 347 aa13.04□□□□□ -0.32
CDC42SE1-203ENST00000470278 ORC6Q9Y5N6 252 aa13.04□□□□□ -0.32
CDC42SE1-203ENST00000470278 ABCA4P78363 2273 aa13.04□□□□□ -0.32
CDC42SE1-203ENST00000470278 ZNF503-AS2A6NEH8 195 aa13.03□□□□□ -0.32
CDC42SE1-203ENST00000470278 DCTN6O00399 190 aa13.03□□□□□ -0.32
CDC42SE1-203ENST00000470278 SIAH2O43255 324 aa13.03□□□□□ -0.32
CDC42SE1-203ENST00000470278 IGKV3-15P01624 115 aa13.03□□□□□ -0.32
CDC42SE1-203ENST00000470278 HRGP04196 525 aa13.03□□□□□ -0.32
CDC42SE1-203ENST00000470278 MSR1P21757 451 aa13.03□□□□□ -0.32
CDC42SE1-203ENST00000470278 PTDSS1P48651 473 aaKnown RBP13.03□□□□□ -0.32
CDC42SE1-203ENST00000470278 RAD23AP54725 363 aa13.03□□□□□ -0.32
CDC42SE1-203ENST00000470278 GLO1Q04760 184 aa13.03□□□□□ -0.32
CDC42SE1-203ENST00000470278 NPRL3Q12980 569 aa13.03□□□□□ -0.32
CDC42SE1-203ENST00000470278 FAM27BQ5VT28 67 aa13.03□□□□□ -0.32
CDC42SE1-203ENST00000470278 SLX4IPQ5VYV7 408 aa13.03□□□□□ -0.32
CDC42SE1-203ENST00000470278 ZBTB49Q6ZSB9 765 aa13.03□□□□□ -0.32
CDC42SE1-203ENST00000470278 CDH24Q86UP0 819 aa13.03□□□□□ -0.32
CDC42SE1-203ENST00000470278 OR2T4Q8NH00 348 aa13.03□□□□□ -0.32
CDC42SE1-203ENST00000470278 RDH12Q96NR8 316 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms