RNA–Protein interactions for RNA: ENST00000470268.1

SF3B1-208, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 2,003 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-208ENST00000470268 IL5RAQ01344 420 aa4.19□□□□□ -1.74
SF3B1-208ENST00000470268 PLP2Q04941 152 aa4.19□□□□□ -1.74
SF3B1-208ENST00000470268 RUNX1T1Q06455 604 aa4.19□□□□□ -1.74
SF3B1-208ENST00000470268 PUDPQ08623 228 aa4.19□□□□□ -1.74
SF3B1-208ENST00000470268 ZP4Q12836 540 aa4.19□□□□□ -1.74
SF3B1-208ENST00000470268 SLC17A1Q14916 467 aa4.19□□□□□ -1.74
SF3B1-208ENST00000470268 ALG10Q5BKT4 473 aa4.19□□□□□ -1.74
SF3B1-208ENST00000470268 ZNF691Q5VV52 312 aa4.19□□□□□ -1.74
SF3B1-208ENST00000470268 ABLIM2Q6H8Q1 611 aa4.19□□□□□ -1.74
SF3B1-208ENST00000470268 RTL6Q6ICC9 239 aa4.19□□□□□ -1.74
SF3B1-208ENST00000470268 C3P1Q6ZMU1 363 aa4.19□□□□□ -1.74
SF3B1-208ENST00000470268 SEM1Q6ZVN7 128 aa4.19□□□□□ -1.74
SF3B1-208ENST00000470268 KCTD8Q6ZWB6 473 aa4.19□□□□□ -1.74
SF3B1-208ENST00000470268 FAM122BQ7Z309 247 aa4.19□□□□□ -1.74
SF3B1-208ENST00000470268 NANOGNBQ7Z5D8 188 aa4.19□□□□□ -1.74
SF3B1-208ENST00000470268 GPAT4Q86UL3 456 aa4.19□□□□□ -1.74
SF3B1-208ENST00000470268 CLDN22Q8N7P3 220 aa4.19□□□□□ -1.74
SF3B1-208ENST00000470268 ZIC4Q8N9L1 334 aa4.19□□□□□ -1.74
SF3B1-208ENST00000470268 SCAIQ8N9R8 606 aa4.19□□□□□ -1.74
SF3B1-208ENST00000470268 BPIFB6Q8NFQ5 453 aa4.19□□□□□ -1.74
SF3B1-208ENST00000470268 FANK1Q8TC84 345 aa4.19□□□□□ -1.74
SF3B1-208ENST00000470268 CPT1CQ8TCG5 803 aa4.19□□□□□ -1.74
SF3B1-208ENST00000470268 RNF128Q8TEB7 428 aa4.19□□□□□ -1.74
SF3B1-208ENST00000470268 APH1BQ8WW43 257 aa4.19□□□□□ -1.74
SF3B1-208ENST00000470268 CPNE4Q96A23 557 aaPredicted RBP4.19□□□□□ -1.74
SF3B1-208ENST00000470268 SARAFQ96BY9 339 aa4.19□□□□□ -1.74
SF3B1-208ENST00000470268 TXNDC15Q96J42 360 aa4.19□□□□□ -1.74
SF3B1-208ENST00000470268 ZNF385AQ96PM9 386 aaKnown RBP4.19□□□□□ -1.74
SF3B1-208ENST00000470268 GPX7Q96SL4 187 aaPredicted RBP4.19□□□□□ -1.74
SF3B1-208ENST00000470268 KATNB1Q9BVA0 655 aa4.19□□□□□ -1.74
SF3B1-208ENST00000470268 TSSK6Q9BXA6 273 aa4.19□□□□□ -1.74
SF3B1-208ENST00000470268 KRCC1Q9NPI7 259 aaPredicted RBP4.19□□□□□ -1.74
SF3B1-208ENST00000470268 FANCFQ9NPI8 374 aa4.19□□□□□ -1.74
SF3B1-208ENST00000470268 NRIP3Q9NQ35 241 aa4.19□□□□□ -1.74
SF3B1-208ENST00000470268 MED29Q9NX70 200 aa4.19□□□□□ -1.74
SF3B1-208ENST00000470268 CLCF1Q9UBD9 225 aa4.19□□□□□ -1.74
SF3B1-208ENST00000470268 RALYQ9UKM9 306 aaKnown RBP4.19□□□□□ -1.74
SF3B1-208ENST00000470268 NDRG4Q9ULP0 352 aaKnown RBP4.19□□□□□ -1.74
SF3B1-208ENST00000470268 FAM215AQ9Y5M1 114 aa4.19□□□□□ -1.74
SF3B1-208ENST00000470268 CEPT1Q9Y6K0 416 aa4.19□□□□□ -1.74
SF3B1-208ENST00000470268 TLN1Q9Y490 2541 aaKnown RBP4.18□□□□□ -1.74
SF3B1-208ENST00000470268 FREM3P0C091 2139 aa4.18□□□□□ -1.74
SF3B1-208ENST00000470268 ZNF407Q9C0G0 2248 aa4.18□□□□□ -1.74
SF3B1-208ENST00000470268 CACNA1BQ00975 2339 aa4.18□□□□□ -1.74
SF3B1-208ENST00000470268 TRIM64A6NGJ6 449 aa4.18□□□□□ -1.74
SF3B1-208ENST00000470268 H0YAE9 185 aa4.18□□□□□ -1.74
SF3B1-208ENST00000470268 RNF13O43567 381 aa4.18□□□□□ -1.74
SF3B1-208ENST00000470268 DNPH1O43598 174 aa4.18□□□□□ -1.74
SF3B1-208ENST00000470268 EIF1BO60739 113 aaKnown RBP4.18□□□□□ -1.74
SF3B1-208ENST00000470268 CYTIPO60759 359 aa4.18□□□□□ -1.74
SF3B1-208ENST00000470268 C1QL1O75973 258 aa4.18□□□□□ -1.74
SF3B1-208ENST00000470268 RCBTB2O95199 551 aa4.18□□□□□ -1.74
SF3B1-208ENST00000470268 PPP1R3DO95685 299 aa4.18□□□□□ -1.74
SF3B1-208ENST00000470268 HIST1H2ABP04908 130 aa4.18□□□□□ -1.74
SF3B1-208ENST00000470268 TPOP07202 933 aa4.18□□□□□ -1.74
SF3B1-208ENST00000470268 CD14P08571 375 aa4.18□□□□□ -1.74
SF3B1-208ENST00000470268 CRHBPP24387 322 aa4.18□□□□□ -1.74
SF3B1-208ENST00000470268 EEF1B2P24534 225 aaKnown RBP4.18□□□□□ -1.74
SF3B1-208ENST00000470268 GTF2E2P29084 291 aaKnown RBP4.18□□□□□ -1.74
SF3B1-208ENST00000470268 MAP2K4P45985 399 aa4.18□□□□□ -1.74
SF3B1-208ENST00000470268 ALDH3B2P48448 385 aa4.18□□□□□ -1.74
SF3B1-208ENST00000470268 NUDT6P53370 316 aa4.18□□□□□ -1.74
SF3B1-208ENST00000470268 CTXN1P60606 82 aa4.18□□□□□ -1.74
SF3B1-208ENST00000470268 PRPS1P60891 318 aa4.18□□□□□ -1.74
SF3B1-208ENST00000470268 ESRRGP62508 458 aa4.18□□□□□ -1.74
SF3B1-208ENST00000470268 ERVK-25P63136 954 aa4.18□□□□□ -1.74
SF3B1-208ENST00000470268 EFNB1P98172 346 aa4.18□□□□□ -1.74
SF3B1-208ENST00000470268 POU3F1Q03052 451 aaPredicted RBP4.18□□□□□ -1.74
SF3B1-208ENST00000470268 DYNC1I2Q13409 638 aaKnown RBP4.18□□□□□ -1.74
SF3B1-208ENST00000470268 MELKQ14680 651 aa4.18□□□□□ -1.74
SF3B1-208ENST00000470268 GINS1Q14691 196 aa4.18□□□□□ -1.74
SF3B1-208ENST00000470268 MFSD13AQ14CX5 517 aa4.18□□□□□ -1.74
SF3B1-208ENST00000470268 ACKR1Q16570 336 aa4.18□□□□□ -1.74
SF3B1-208ENST00000470268 RNF151Q2KHN1 245 aa4.18□□□□□ -1.74
SF3B1-208ENST00000470268 PGGHGQ32M88 737 aa4.18□□□□□ -1.74
SF3B1-208ENST00000470268 ACSF3Q4G176 576 aaPredicted RBP4.18□□□□□ -1.74
SF3B1-208ENST00000470268 SOWAHCQ53LP3 525 aaPredicted RBP4.18□□□□□ -1.74
SF3B1-208ENST00000470268 C6orf141Q5SZD1 244 aa4.18□□□□□ -1.74
SF3B1-208ENST00000470268 ARMC4Q5T2S8 1044 aa4.18□□□□□ -1.74
SF3B1-208ENST00000470268 SLX4IPQ5VYV7 408 aa4.18□□□□□ -1.74
SF3B1-208ENST00000470268 C12orf73Q69YU5 71 aa4.18□□□□□ -1.74
SF3B1-208ENST00000470268 XAF1Q6GPH4 301 aa4.18□□□□□ -1.74
SF3B1-208ENST00000470268 TMEM225Q6GV28 225 aa4.18□□□□□ -1.74
SF3B1-208ENST00000470268 SLC27A4Q6P1M0 643 aa4.18□□□□□ -1.74
SF3B1-208ENST00000470268 ZNF585AQ6P3V2 769 aa4.18□□□□□ -1.74
SF3B1-208ENST00000470268 GFRALQ6UXV0 394 aa4.18□□□□□ -1.74
SF3B1-208ENST00000470268 NCCRP1Q6ZVX7 275 aaPredicted RBP4.18□□□□□ -1.74
SF3B1-208ENST00000470268 PTCHD4Q6ZW05 846 aa4.18□□□□□ -1.74
SF3B1-208ENST00000470268 FCRLAQ7L513 359 aa4.18□□□□□ -1.74
SF3B1-208ENST00000470268 HIST3H2AQ7L7L0 130 aa4.18□□□□□ -1.74
SF3B1-208ENST00000470268 BCDIN3DQ7Z5W3 292 aaKnown RBP4.18□□□□□ -1.74
SF3B1-208ENST00000470268 PXKQ7Z7A4 578 aa4.18□□□□□ -1.74
SF3B1-208ENST00000470268 DOLPP1Q86YN1 238 aa4.18□□□□□ -1.74
SF3B1-208ENST00000470268 CMTM4Q8IZR5 234 aa4.18□□□□□ -1.74
SF3B1-208ENST00000470268 C8orf59Q8N0T1 100 aaPredicted RBP4.18□□□□□ -1.74
SF3B1-208ENST00000470268 LNX2Q8N448 690 aa4.18□□□□□ -1.74
SF3B1-208ENST00000470268 ADPRHL1Q8NDY3 354 aa4.18□□□□□ -1.74
SF3B1-208ENST00000470268 OR14K1Q8NGZ2 314 aa4.18□□□□□ -1.74
SF3B1-208ENST00000470268 ZPLD1Q8TCW7 415 aa4.18□□□□□ -1.74
SF3B1-208ENST00000470268 CFHR4Q92496 578 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms