RNA–Protein interactions for RNA: ENST00000469400.1

TRAPPC12-216, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 720 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-216ENST00000469400 CD55P08174 381 aa10.79□□□□□ -0.68
TRAPPC12-216ENST00000469400 STOMP27105 288 aa10.79□□□□□ -0.68
TRAPPC12-216ENST00000469400 CD80P33681 288 aa10.79□□□□□ -0.68
TRAPPC12-216ENST00000469400 LIPAP38571 399 aa10.79□□□□□ -0.68
TRAPPC12-216ENST00000469400 RGS8P57771 180 aaPredicted RBP10.79□□□□□ -0.68
TRAPPC12-216ENST00000469400 FADDQ13158 208 aa10.79□□□□□ -0.68
TRAPPC12-216ENST00000469400 STX3Q13277 289 aa10.79□□□□□ -0.68
TRAPPC12-216ENST00000469400 TMEM155Q4W5P6 130 aa10.79□□□□□ -0.68
TRAPPC12-216ENST00000469400 PABPC1L2AQ5JQF8 200 aa10.79□□□□□ -0.68
TRAPPC12-216ENST00000469400 CEP85LQ5SZL2 805 aa10.79□□□□□ -0.68
TRAPPC12-216ENST00000469400 SWT1Q5T5J6 900 aaKnown RBP10.79□□□□□ -0.68
TRAPPC12-216ENST00000469400 MSANTD1Q6ZTZ1 278 aa10.79□□□□□ -0.68
TRAPPC12-216ENST00000469400 LRRC28Q86X40 367 aaPredicted RBP10.79□□□□□ -0.68
TRAPPC12-216ENST00000469400 PARP8Q8N3A8 854 aa10.79□□□□□ -0.68
TRAPPC12-216ENST00000469400 NFKBIDQ8NI38 313 aa10.79□□□□□ -0.68
TRAPPC12-216ENST00000469400 SLC25A40Q8TBP6 338 aa10.79□□□□□ -0.68
TRAPPC12-216ENST00000469400 KLF14Q8TD94 323 aaPredicted RBP10.79□□□□□ -0.68
TRAPPC12-216ENST00000469400 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.79□□□□□ -0.68
TRAPPC12-216ENST00000469400 MCHR2Q969V1 340 aa10.79□□□□□ -0.68
TRAPPC12-216ENST00000469400 CITED1Q99966 193 aa10.79□□□□□ -0.68
TRAPPC12-216ENST00000469400 OR2J1Q9GZK6 312 aa10.79□□□□□ -0.68
TRAPPC12-216ENST00000469400 MSL2Q9HCI7 577 aa10.79□□□□□ -0.68
TRAPPC12-216ENST00000469400 TMEM106BQ9NUM4 274 aa10.79□□□□□ -0.68
TRAPPC12-216ENST00000469400 EIF3KQ9UBQ5 218 aaKnown RBP10.79□□□□□ -0.68
TRAPPC12-216ENST00000469400 KLHL21Q9UJP4 597 aa10.79□□□□□ -0.68
TRAPPC12-216ENST00000469400 ZDHHC8Q9ULC8 765 aa10.79□□□□□ -0.68
TRAPPC12-216ENST00000469400 TRIM33Q9UPN9 1127 aa10.79□□□□□ -0.68
TRAPPC12-216ENST00000469400 MDFIC2A0A1B0GVS7 189 aa10.78□□□□□ -0.68
TRAPPC12-216ENST00000469400 C5orf49A4QMS7 147 aa10.78□□□□□ -0.68
TRAPPC12-216ENST00000469400 FAM181BA6NEQ2 426 aa10.78□□□□□ -0.68
TRAPPC12-216ENST00000469400 M0QZ24 198 aa10.78□□□□□ -0.68
TRAPPC12-216ENST00000469400 HOXA3O43365 443 aaPredicted RBP10.78□□□□□ -0.68
TRAPPC12-216ENST00000469400 CH25HO95992 272 aa10.78□□□□□ -0.68
TRAPPC12-216ENST00000469400 PLATP00750 562 aa10.78□□□□□ -0.68
TRAPPC12-216ENST00000469400 IDO1P14902 403 aa10.78□□□□□ -0.68
TRAPPC12-216ENST00000469400 TNFAIP6P98066 277 aaPredicted RBP10.78□□□□□ -0.68
TRAPPC12-216ENST00000469400 ZNF74Q16587 644 aa10.78□□□□□ -0.68
TRAPPC12-216ENST00000469400 HIST3H3Q16695 136 aa10.78□□□□□ -0.68
TRAPPC12-216ENST00000469400 RHOUQ7L0Q8 258 aa10.78□□□□□ -0.68
TRAPPC12-216ENST00000469400 KRT73Q86Y46 540 aa10.78□□□□□ -0.68
TRAPPC12-216ENST00000469400 HIPK4Q8NE63 616 aa10.78□□□□□ -0.68
TRAPPC12-216ENST00000469400 OR4F5Q8NH21 305 aa10.78□□□□□ -0.68
TRAPPC12-216ENST00000469400 GTF2H4Q92759 462 aa10.78□□□□□ -0.68
TRAPPC12-216ENST00000469400 POM121L2Q96KW2 1035 aa10.78□□□□□ -0.68
TRAPPC12-216ENST00000469400 ZNF347Q96SE7 839 aa10.78□□□□□ -0.68
TRAPPC12-216ENST00000469400 SPATA5L1Q9BVQ7 753 aa10.78□□□□□ -0.68
TRAPPC12-216ENST00000469400 PAIP1Q9H074 479 aaKnown RBP10.78□□□□□ -0.68
TRAPPC12-216ENST00000469400 RAD21L1Q9H4I0 556 aa10.78□□□□□ -0.68
TRAPPC12-216ENST00000469400 BEX1Q9HBH7 125 aa10.78□□□□□ -0.68
TRAPPC12-216ENST00000469400 ZIM2Q9NZV7 527 aa10.78□□□□□ -0.68
TRAPPC12-216ENST00000469400 OR5V1Q9UGF6 321 aa10.78□□□□□ -0.68
TRAPPC12-216ENST00000469400 LOC100509620A0A075B734 347 aa10.77□□□□□ -0.69
TRAPPC12-216ENST00000469400 F5H0A9 414 aaPredicted RBP10.77□□□□□ -0.69
TRAPPC12-216ENST00000469400 IGHG1P01857 330 aa10.77□□□□□ -0.69
TRAPPC12-216ENST00000469400 PPIAL4GP0DN37 164 aa10.77□□□□□ -0.69
TRAPPC12-216ENST00000469400 ZNF84P51523 738 aa10.77□□□□□ -0.69
TRAPPC12-216ENST00000469400 POLR2JP52435 117 aaKnown RBP10.77□□□□□ -0.69
TRAPPC12-216ENST00000469400 RAG2P55895 527 aa10.77□□□□□ -0.69
TRAPPC12-216ENST00000469400 CLRN1P58418 232 aa10.77□□□□□ -0.69
TRAPPC12-216ENST00000469400 BTG1P62324 171 aa10.77□□□□□ -0.69
TRAPPC12-216ENST00000469400 CDK6Q00534 326 aa10.77□□□□□ -0.69
TRAPPC12-216ENST00000469400 BST1Q10588 318 aa10.77□□□□□ -0.69
TRAPPC12-216ENST00000469400 ZMYND11Q15326 602 aa10.77□□□□□ -0.69
TRAPPC12-216ENST00000469400 ESCO2Q56NI9 601 aa10.77□□□□□ -0.69
TRAPPC12-216ENST00000469400 ZNF362Q5T0B9 420 aaPredicted RBP10.77□□□□□ -0.69
TRAPPC12-216ENST00000469400 GCNT6Q5T4J0 391 aa10.77□□□□□ -0.69
TRAPPC12-216ENST00000469400 HHATQ5VTY9 493 aa10.77□□□□□ -0.69
TRAPPC12-216ENST00000469400 OLFML2AQ68BL7 652 aa10.77□□□□□ -0.69
TRAPPC12-216ENST00000469400 NXNQ6DKJ4 435 aa10.77□□□□□ -0.69
TRAPPC12-216ENST00000469400 REEP3Q6NUK4 255 aa10.77□□□□□ -0.69
TRAPPC12-216ENST00000469400 BRICD5Q6PL45 260 aa10.77□□□□□ -0.69
TRAPPC12-216ENST00000469400 UNQ6126/PRO20091Q6UXV3 157 aa10.77□□□□□ -0.69
TRAPPC12-216ENST00000469400 LINC00114Q6XXX2 140 aa10.77□□□□□ -0.69
TRAPPC12-216ENST00000469400 RFPL4BQ6ZWI9 263 aa10.77□□□□□ -0.69
TRAPPC12-216ENST00000469400 RANBP3LQ86VV4 465 aaPredicted RBP10.77□□□□□ -0.69
TRAPPC12-216ENST00000469400 ZNF283Q8N7M2 679 aa10.77□□□□□ -0.69
TRAPPC12-216ENST00000469400 OR9I1Q8NGQ6 314 aa10.77□□□□□ -0.69
TRAPPC12-216ENST00000469400 UPRTQ96BW1 309 aa10.77□□□□□ -0.69
TRAPPC12-216ENST00000469400 ARHGDIGQ99819 225 aa10.77□□□□□ -0.69
TRAPPC12-216ENST00000469400 SIAEQ9HAT2 523 aa10.77□□□□□ -0.69
TRAPPC12-216ENST00000469400 CCNB1IP1Q9NPC3 277 aa10.77□□□□□ -0.69
TRAPPC12-216ENST00000469400 NANSQ9NR45 359 aa10.77□□□□□ -0.69
TRAPPC12-216ENST00000469400 SDR39U1Q9NRG7 319 aaPredicted RBP10.77□□□□□ -0.69
TRAPPC12-216ENST00000469400 CGGBP1Q9UFW8 167 aaPredicted RBP10.77□□□□□ -0.69
TRAPPC12-216ENST00000469400 PRORSD1PA6NEY8 169 aa10.76□□□□□ -0.69
TRAPPC12-216ENST00000469400 TRPC5OSA6NMA1 111 aa10.76□□□□□ -0.69
TRAPPC12-216ENST00000469400 HDAC3O15379 428 aa10.76□□□□□ -0.69
TRAPPC12-216ENST00000469400 MGRN1O60291 552 aa10.76□□□□□ -0.69
TRAPPC12-216ENST00000469400 CRYBA1P05813 215 aa10.76□□□□□ -0.69
TRAPPC12-216ENST00000469400 ZNF32P17041 273 aa10.76□□□□□ -0.69
TRAPPC12-216ENST00000469400 HOXB9P17482 250 aaPredicted RBP10.76□□□□□ -0.69
TRAPPC12-216ENST00000469400 CDAP32320 146 aa10.76□□□□□ -0.69
TRAPPC12-216ENST00000469400 GDI2P50395 445 aaKnown RBP10.76□□□□□ -0.69
TRAPPC12-216ENST00000469400 PPP1CBP62140 327 aa10.76□□□□□ -0.69
TRAPPC12-216ENST00000469400 RELBQ01201 579 aa10.76□□□□□ -0.69
TRAPPC12-216ENST00000469400 PAX2Q02962 417 aa10.76□□□□□ -0.69
TRAPPC12-216ENST00000469400 CDK5R2Q13319 367 aa10.76□□□□□ -0.69
TRAPPC12-216ENST00000469400 DEFB112Q30KQ8 113 aa10.76□□□□□ -0.69
TRAPPC12-216ENST00000469400 ZMAT1Q5H9K5 638 aa10.76□□□□□ -0.69
TRAPPC12-216ENST00000469400 MTX3Q5HYI7 312 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms