RNA–Protein interactions for RNA: ENST00000469123.5

SSBP1-208, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 5

Gene SSBP1, Length 662 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-208ENST00000469123 TEX47Q8TBZ9 253 aa7.47□□□□□ -1.21
SSBP1-208ENST00000469123 UTP4Q969X6 686 aaKnown RBP7.47□□□□□ -1.21
SSBP1-208ENST00000469123 SLCO4A1Q96BD0 722 aa7.47□□□□□ -1.21
SSBP1-208ENST00000469123 MBD6Q96DN6 1003 aa7.47□□□□□ -1.21
SSBP1-208ENST00000469123 CENPNQ96H22 339 aaPredicted RBP7.47□□□□□ -1.21
SSBP1-208ENST00000469123 Q96M85 177 aa7.47□□□□□ -1.21
SSBP1-208ENST00000469123 ERMAPQ96PL5 475 aaPredicted RBP7.47□□□□□ -1.21
SSBP1-208ENST00000469123 FEVQ99581 238 aa7.47□□□□□ -1.21
SSBP1-208ENST00000469123 GPA33Q99795 319 aa7.47□□□□□ -1.21
SSBP1-208ENST00000469123 PRRG3Q9BZD7 231 aa7.47□□□□□ -1.21
SSBP1-208ENST00000469123 GRIP2Q9C0E4 1043 aa7.47□□□□□ -1.21
SSBP1-208ENST00000469123 RACGAP1Q9H0H5 632 aa7.47□□□□□ -1.21
SSBP1-208ENST00000469123 TBC1D23Q9NUY8 699 aa7.47□□□□□ -1.21
SSBP1-208ENST00000469123 KIF17Q9P2E2 1029 aa7.47□□□□□ -1.21
SSBP1-208ENST00000469123 ST6GALNAC2Q9UJ37 374 aa7.47□□□□□ -1.21
SSBP1-208ENST00000469123 KLHL21Q9UJP4 597 aa7.47□□□□□ -1.21
SSBP1-208ENST00000469123 ADAM18Q9Y3Q7 739 aa7.47□□□□□ -1.21
SSBP1-208ENST00000469123 SPEF1Q9Y4P9 236 aa7.47□□□□□ -1.21
SSBP1-208ENST00000469123 MYO9AB2RTY4 2548 aa7.47□□□□□ -1.21
SSBP1-208ENST00000469123 POLQO75417 2590 aa7.47□□□□□ -1.21
SSBP1-208ENST00000469123 C12orf71A8MTZ7 269 aa7.46□□□□□ -1.22
SSBP1-208ENST00000469123 BHLHE40O14503 412 aa7.46□□□□□ -1.22
SSBP1-208ENST00000469123 ABCD4O14678 606 aa7.46□□□□□ -1.22
SSBP1-208ENST00000469123 TIPRLO75663 272 aa7.46□□□□□ -1.22
SSBP1-208ENST00000469123 CST2P09228 141 aa7.46□□□□□ -1.22
SSBP1-208ENST00000469123 CD79AP11912 226 aa7.46□□□□□ -1.22
SSBP1-208ENST00000469123 BMP4P12644 408 aa7.46□□□□□ -1.22
SSBP1-208ENST00000469123 MSR1P21757 451 aa7.46□□□□□ -1.22
SSBP1-208ENST00000469123 BLVRAP53004 296 aa7.46□□□□□ -1.22
SSBP1-208ENST00000469123 CDH11P55287 796 aa7.46□□□□□ -1.22
SSBP1-208ENST00000469123 RPS23P62266 143 aaKnown RBP7.46□□□□□ -1.22
SSBP1-208ENST00000469123 LSM6P62312 80 aaKnown RBP7.46□□□□□ -1.22
SSBP1-208ENST00000469123 GLO1Q04760 184 aa7.46□□□□□ -1.22
SSBP1-208ENST00000469123 CCNIQ14094 377 aa7.46□□□□□ -1.22
SSBP1-208ENST00000469123 KEAP1Q14145 624 aa7.46□□□□□ -1.22
SSBP1-208ENST00000469123 FAM27BQ5VT28 67 aa7.46□□□□□ -1.22
SSBP1-208ENST00000469123 ALKBH2Q6NS38 261 aa7.46□□□□□ -1.22
SSBP1-208ENST00000469123 ZNF544Q6NX49 715 aa7.46□□□□□ -1.22
SSBP1-208ENST00000469123 C16orf87Q6PH81 154 aa7.46□□□□□ -1.22
SSBP1-208ENST00000469123 SLC22A25Q6T423 547 aa7.46□□□□□ -1.22
SSBP1-208ENST00000469123 MEX3DQ86XN8 651 aaKnown RBP7.46□□□□□ -1.22
SSBP1-208ENST00000469123 GLB1L2Q8IW92 636 aa7.46□□□□□ -1.22
SSBP1-208ENST00000469123 ATG16L2Q8NAA4 619 aa7.46□□□□□ -1.22
SSBP1-208ENST00000469123 NUP37Q8NFH4 326 aa7.46□□□□□ -1.22
SSBP1-208ENST00000469123 IPCEF1Q8WWN9 437 aaPredicted RBP7.46□□□□□ -1.22
SSBP1-208ENST00000469123 GTPBP3Q969Y2 492 aaKnown RBP7.46□□□□□ -1.22
SSBP1-208ENST00000469123 RASD2Q96D21 266 aa7.46□□□□□ -1.22
SSBP1-208ENST00000469123 ZNF837Q96EG3 531 aaPredicted RBP7.46□□□□□ -1.22
SSBP1-208ENST00000469123 SAMD8Q96LT4 415 aa7.46□□□□□ -1.22
SSBP1-208ENST00000469123 SYT4Q9H2B2 425 aa7.46□□□□□ -1.22
SSBP1-208ENST00000469123 CCNB1IP1Q9NPC3 277 aa7.46□□□□□ -1.22
SSBP1-208ENST00000469123 BEX4Q9NWD9 120 aaPredicted RBP7.46□□□□□ -1.22
SSBP1-208ENST00000469123 VNN3Q9NY84 501 aa7.46□□□□□ -1.22
SSBP1-208ENST00000469123 B3GNT2Q9NY97 397 aa7.46□□□□□ -1.22
SSBP1-208ENST00000469123 NPAP1Q9NZP6 1156 aa7.46□□□□□ -1.22
SSBP1-208ENST00000469123 KCNG2Q9UJ96 466 aa7.46□□□□□ -1.22
SSBP1-208ENST00000469123 POU2F3Q9UKI9 436 aa7.46□□□□□ -1.22
SSBP1-208ENST00000469123 FKBP7Q9Y680 259 aa7.46□□□□□ -1.22
SSBP1-208ENST00000469123 DCHS2Q6V1P9 2916 aa7.46□□□□□ -1.22
SSBP1-208ENST00000469123 IQCMA0A1B0GVH7 501 aa7.45□□□□□ -1.22
SSBP1-208ENST00000469123 A0A1W2PR80 420 aa7.45□□□□□ -1.22
SSBP1-208ENST00000469123 RIIAD1A6NNX1 92 aa7.45□□□□□ -1.22
SSBP1-208ENST00000469123 SHISA9B4DS77 424 aa7.45□□□□□ -1.22
SSBP1-208ENST00000469123 H3BN98 237 aa7.45□□□□□ -1.22
SSBP1-208ENST00000469123 SOCS2O14508 198 aa7.45□□□□□ -1.22
SSBP1-208ENST00000469123 SLC16A7O60669 478 aa7.45□□□□□ -1.22
SSBP1-208ENST00000469123 SLC2A10O95528 541 aa7.45□□□□□ -1.22
SSBP1-208ENST00000469123 PPP1R3DO95685 299 aa7.45□□□□□ -1.22
SSBP1-208ENST00000469123 HLA-HP01893 362 aa7.45□□□□□ -1.22
SSBP1-208ENST00000469123 HMGN1P05114 100 aa7.45□□□□□ -1.22
SSBP1-208ENST00000469123 SERPINA5P05154 406 aa7.45□□□□□ -1.22
SSBP1-208ENST00000469123 CECR9P0C854 216 aa7.45□□□□□ -1.22
SSBP1-208ENST00000469123 OSMP13725 252 aa7.45□□□□□ -1.22
SSBP1-208ENST00000469123 HIST1H1CP16403 213 aaKnown RBP7.45□□□□□ -1.22
SSBP1-208ENST00000469123 ZNF23P17027 643 aa7.45□□□□□ -1.22
SSBP1-208ENST00000469123 ZNF3P17036 446 aa7.45□□□□□ -1.22
SSBP1-208ENST00000469123 PAICSP22234 425 aaKnown RBP7.45□□□□□ -1.22
SSBP1-208ENST00000469123 LAP3P28838 519 aa7.45□□□□□ -1.22
SSBP1-208ENST00000469123 GRK5P34947 590 aa7.45□□□□□ -1.22
SSBP1-208ENST00000469123 ESRRGP62508 458 aa7.45□□□□□ -1.22
SSBP1-208ENST00000469123 RAB1AP62820 205 aa7.45□□□□□ -1.22
SSBP1-208ENST00000469123 MYBPC1Q00872 1141 aa7.45□□□□□ -1.22
SSBP1-208ENST00000469123 NAAAQ02083 359 aa7.45□□□□□ -1.22
SSBP1-208ENST00000469123 HSF2Q03933 536 aa7.45□□□□□ -1.22
SSBP1-208ENST00000469123 SCRN3Q0VDG4 424 aa7.45□□□□□ -1.22
SSBP1-208ENST00000469123 NPRL3Q12980 569 aa7.45□□□□□ -1.22
SSBP1-208ENST00000469123 AQP6Q13520 282 aa7.45□□□□□ -1.22
SSBP1-208ENST00000469123 KPNB1Q14974 876 aaKnown RBP7.45□□□□□ -1.22
SSBP1-208ENST00000469123 SLC36A3Q495N2 470 aa7.45□□□□□ -1.22
SSBP1-208ENST00000469123 SLC27A4Q6P1M0 643 aa7.45□□□□□ -1.22
SSBP1-208ENST00000469123 LEG1Q6P5S2 330 aa7.45□□□□□ -1.22
SSBP1-208ENST00000469123 ZBTB46Q86UZ6 589 aa7.45□□□□□ -1.22
SSBP1-208ENST00000469123 MDP1Q86V88 176 aa7.45□□□□□ -1.22
SSBP1-208ENST00000469123 LSRQ86X29 649 aaPredicted RBP7.45□□□□□ -1.22
SSBP1-208ENST00000469123 WDFY1Q8IWB7 410 aa7.45□□□□□ -1.22
SSBP1-208ENST00000469123 ALDH16A1Q8IZ83 802 aa7.45□□□□□ -1.22
SSBP1-208ENST00000469123 OR2T4Q8NH00 348 aa7.45□□□□□ -1.22
SSBP1-208ENST00000469123 NSMAFQ92636 917 aa7.45□□□□□ -1.22
SSBP1-208ENST00000469123 AKAP1Q92667 903 aaKnown RBP eCLIP7.45□□□□□ -1.22
SSBP1-208ENST00000469123 NABP1Q96AH0 204 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms