RNA–Protein interactions for RNA: ENST00000468018.5

ATG4B-215, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 721 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-215ENST00000468018 OR52J3Q8NH60 311 aa13.09□□□□□ -0.31
ATG4B-215ENST00000468018 FBXO17Q96EF6 278 aa13.09□□□□□ -0.31
ATG4B-215ENST00000468018 RSRC1Q96IZ7 334 aaKnown RBP13.09□□□□□ -0.31
ATG4B-215ENST00000468018 DOK1Q99704 481 aa13.09□□□□□ -0.31
ATG4B-215ENST00000468018 ADAM18Q9Y3Q7 739 aa13.09□□□□□ -0.31
ATG4B-215ENST00000468018 PMF1-BGLAPU3KQ54 211 aa13.09□□□□□ -0.31
ATG4B-215ENST00000468018 FAM171A2A8MVW0 826 aa13.08□□□□□ -0.32
ATG4B-215ENST00000468018 AHCYL1O43865 530 aa13.08□□□□□ -0.32
ATG4B-215ENST00000468018 GADD45GO95257 159 aa13.08□□□□□ -0.32
ATG4B-215ENST00000468018 SNAP29O95721 258 aa13.08□□□□□ -0.32
ATG4B-215ENST00000468018 TXNDC12O95881 172 aa13.08□□□□□ -0.32
ATG4B-215ENST00000468018 HEXAP06865 529 aa13.08□□□□□ -0.32
ATG4B-215ENST00000468018 BMP4P12644 408 aa13.08□□□□□ -0.32
ATG4B-215ENST00000468018 RRM2P31350 389 aa13.08□□□□□ -0.32
ATG4B-215ENST00000468018 CDAP32320 146 aa13.08□□□□□ -0.32
ATG4B-215ENST00000468018 GLRXP35754 106 aa13.08□□□□□ -0.32
ATG4B-215ENST00000468018 PPOXP50336 477 aa13.08□□□□□ -0.32
ATG4B-215ENST00000468018 ERVK-25P63136 954 aa13.08□□□□□ -0.32
ATG4B-215ENST00000468018 SPIBQ01892 262 aa13.08□□□□□ -0.32
ATG4B-215ENST00000468018 KRTAP1-1Q07627 177 aa13.08□□□□□ -0.32
ATG4B-215ENST00000468018 CD47Q08722 323 aa13.08□□□□□ -0.32
ATG4B-215ENST00000468018 SNTB2Q13425 540 aaKnown RBP13.08□□□□□ -0.32
ATG4B-215ENST00000468018 DAG1Q14118 895 aa13.08□□□□□ -0.32
ATG4B-215ENST00000468018 FAM27BQ5VT28 67 aa13.08□□□□□ -0.32
ATG4B-215ENST00000468018 C1orf94Q6P1W5 598 aa13.08□□□□□ -0.32
ATG4B-215ENST00000468018 CYP2R1Q6VVX0 501 aa13.08□□□□□ -0.32
ATG4B-215ENST00000468018 TRPM8Q7Z2W7 1104 aa13.08□□□□□ -0.32
ATG4B-215ENST00000468018 ZDHHC21Q8IVQ6 265 aa13.08□□□□□ -0.32
ATG4B-215ENST00000468018 BCAS4Q8TDM0 211 aa13.08□□□□□ -0.32
ATG4B-215ENST00000468018 MCUR1Q96AQ8 359 aa13.08□□□□□ -0.32
ATG4B-215ENST00000468018 Q96M85 177 aa13.08□□□□□ -0.32
ATG4B-215ENST00000468018 RBP7Q96R05 134 aa13.08□□□□□ -0.32
ATG4B-215ENST00000468018 MAGIXQ9H6Y5 334 aa13.08□□□□□ -0.32
ATG4B-215ENST00000468018 FBXO9Q9UK97 447 aaPredicted RBP13.08□□□□□ -0.32
ATG4B-215ENST00000468018 LYVE1Q9Y5Y7 322 aa13.08□□□□□ -0.32
ATG4B-215ENST00000468018 SLC22A23A1A5C7 686 aa13.07□□□□□ -0.32
ATG4B-215ENST00000468018 PRSS37A4D1T9 235 aa13.07□□□□□ -0.32
ATG4B-215ENST00000468018 LY6G6DO95868 133 aa13.07□□□□□ -0.32
ATG4B-215ENST00000468018 APEHP13798 732 aaKnown RBP13.07□□□□□ -0.32
ATG4B-215ENST00000468018 FPR3P25089 353 aa13.07□□□□□ -0.32
ATG4B-215ENST00000468018 SDHAP31040 664 aa13.07□□□□□ -0.32
ATG4B-215ENST00000468018 GSSP48637 474 aa13.07□□□□□ -0.32
ATG4B-215ENST00000468018 EVX1P49640 407 aa13.07□□□□□ -0.32
ATG4B-215ENST00000468018 EFNA4P52798 201 aa13.07□□□□□ -0.32
ATG4B-215ENST00000468018 SNRPD2P62316 118 aaKnown RBP13.07□□□□□ -0.32
ATG4B-215ENST00000468018 RAB35Q15286 201 aa13.07□□□□□ -0.32
ATG4B-215ENST00000468018 KRT80Q6KB66 452 aa13.07□□□□□ -0.32
ATG4B-215ENST00000468018 TMEM53Q6P2H8 277 aa13.07□□□□□ -0.32
ATG4B-215ENST00000468018 VHLLQ6RSH7 139 aa13.07□□□□□ -0.32
ATG4B-215ENST00000468018 PAQR4Q8N4S7 273 aaPredicted RBP13.07□□□□□ -0.32
ATG4B-215ENST00000468018 SLC30A7Q8NEW0 376 aa13.07□□□□□ -0.32
ATG4B-215ENST00000468018 OR4C15Q8NGM1 316 aa13.07□□□□□ -0.32
ATG4B-215ENST00000468018 NSMAFQ92636 917 aa13.07□□□□□ -0.32
ATG4B-215ENST00000468018 MRPL24Q96A35 216 aaKnown RBP13.07□□□□□ -0.32
ATG4B-215ENST00000468018 ASB9Q96DX5 294 aa13.07□□□□□ -0.32
ATG4B-215ENST00000468018 ZNF570Q96NI8 536 aa13.07□□□□□ -0.32
ATG4B-215ENST00000468018 SORCS2Q96PQ0 1159 aa13.07□□□□□ -0.32
ATG4B-215ENST00000468018 REG4Q9BYZ8 158 aa13.07□□□□□ -0.32
ATG4B-215ENST00000468018 C1orf198Q9H425 327 aa13.07□□□□□ -0.32
ATG4B-215ENST00000468018 KRCC1Q9NPI7 259 aaPredicted RBP13.07□□□□□ -0.32
ATG4B-215ENST00000468018 GRHPRQ9UBQ7 328 aa13.07□□□□□ -0.32
ATG4B-215ENST00000468018 SLC7A8Q9UHI5 535 aa13.07□□□□□ -0.32
ATG4B-215ENST00000468018 UNC119BA6NIH7 251 aa13.06□□□□□ -0.32
ATG4B-215ENST00000468018 H7C1C5 153 aa13.06□□□□□ -0.32
ATG4B-215ENST00000468018 ACOT8O14734 319 aa13.06□□□□□ -0.32
ATG4B-215ENST00000468018 SSX4O60224 188 aa13.06□□□□□ -0.32
ATG4B-215ENST00000468018 GPRIN2O60269 458 aa13.06□□□□□ -0.32
ATG4B-215ENST00000468018 KRT36O76013 467 aa13.06□□□□□ -0.32
ATG4B-215ENST00000468018 F12P00748 615 aaPredicted RBP13.06□□□□□ -0.32
ATG4B-215ENST00000468018 CST2P09228 141 aa13.06□□□□□ -0.32
ATG4B-215ENST00000468018 ZNF32P17041 273 aa13.06□□□□□ -0.32
ATG4B-215ENST00000468018 RPL4P36578 427 aaKnown RBP13.06□□□□□ -0.32
ATG4B-215ENST00000468018 NUDT6P53370 316 aa13.06□□□□□ -0.32
ATG4B-215ENST00000468018 DSCR9P59020 149 aa13.06□□□□□ -0.32
ATG4B-215ENST00000468018 LCN6P62502 163 aa13.06□□□□□ -0.32
ATG4B-215ENST00000468018 KRR1Q13601 381 aaKnown RBP13.06□□□□□ -0.32
ATG4B-215ENST00000468018 GPR139Q6DWJ6 353 aa13.06□□□□□ -0.32
ATG4B-215ENST00000468018 ZNF770Q6IQ21 691 aaPredicted RBP13.06□□□□□ -0.32
ATG4B-215ENST00000468018 DPY19L2P2Q6ZN68 376 aa13.06□□□□□ -0.32
ATG4B-215ENST00000468018 DHFR2Q86XF0 187 aa13.06□□□□□ -0.32
ATG4B-215ENST00000468018 LRRC18Q8N456 261 aa13.06□□□□□ -0.32
ATG4B-215ENST00000468018 CPEB3Q8NE35 698 aaKnown RBP13.06□□□□□ -0.32
ATG4B-215ENST00000468018 RASD2Q96D21 266 aa13.06□□□□□ -0.32
ATG4B-215ENST00000468018 TRIM15Q9C019 465 aa13.06□□□□□ -0.32
ATG4B-215ENST00000468018 NDEL1Q9GZM8 345 aa13.06□□□□□ -0.32
ATG4B-215ENST00000468018 POLE4Q9NR33 117 aa13.06□□□□□ -0.32
ATG4B-215ENST00000468018 VSX1Q9NZR4 365 aaPredicted RBP13.06□□□□□ -0.32
ATG4B-215ENST00000468018 AURKCQ9UQB9 309 aa13.06□□□□□ -0.32
ATG4B-215ENST00000468018 IGHV4-30-2A0A087WSY4 118 aa13.05□□□□□ -0.32
ATG4B-215ENST00000468018 TEX13CA0A0J9YWL9 993 aa13.05□□□□□ -0.32
ATG4B-215ENST00000468018 RNF223E7ERA6 249 aa13.05□□□□□ -0.32
ATG4B-215ENST00000468018 ARPC3O15145 178 aa13.05□□□□□ -0.32
ATG4B-215ENST00000468018 UBOX5O94941 541 aa13.05□□□□□ -0.32
ATG4B-215ENST00000468018 PTHP01270 115 aa13.05□□□□□ -0.32
ATG4B-215ENST00000468018 SCG5P05408 212 aa13.05□□□□□ -0.32
ATG4B-215ENST00000468018 CSF3P09919 207 aa13.05□□□□□ -0.32
ATG4B-215ENST00000468018 CTLA4P16410 223 aa13.05□□□□□ -0.32
ATG4B-215ENST00000468018 HOXB4P17483 251 aaPredicted RBP13.05□□□□□ -0.32
ATG4B-215ENST00000468018 LAP3P28838 519 aa13.05□□□□□ -0.32
ATG4B-215ENST00000468018 PCSK6P29122 969 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms