RNA–Protein interactions for RNA: ENST00000467731.1

SCAF4-204, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 1 (best)

Gene SCAF4, Length 2,976 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-204ENST00000467731 SLC19A2O60779 497 aa6.1□□□□□ -1.43
SCAF4-204ENST00000467731 IFNGR1P15260 489 aa6.1□□□□□ -1.43
SCAF4-204ENST00000467731 SOX6P35712 828 aa6.1□□□□□ -1.43
SCAF4-204ENST00000467731 CAPGP40121 348 aa6.1□□□□□ -1.43
SCAF4-204ENST00000467731 ADARB1P78563 741 aaKnown RBP6.1□□□□□ -1.43
SCAF4-204ENST00000467731 RASGEF1BQ0VAM2 473 aa6.1□□□□□ -1.43
SCAF4-204ENST00000467731 KEAP1Q14145 624 aa6.1□□□□□ -1.43
SCAF4-204ENST00000467731 POU4F3Q15319 338 aa6.1□□□□□ -1.43
SCAF4-204ENST00000467731 ACKR1Q16570 336 aa6.1□□□□□ -1.43
SCAF4-204ENST00000467731 PGGHGQ32M88 737 aa6.1□□□□□ -1.43
SCAF4-204ENST00000467731 ACSF3Q4G176 576 aaPredicted RBP6.1□□□□□ -1.43
SCAF4-204ENST00000467731 SLC35F1Q5T1Q4 408 aa6.1□□□□□ -1.43
SCAF4-204ENST00000467731 USP51Q70EK9 711 aa6.1□□□□□ -1.43
SCAF4-204ENST00000467731 CCDC71Q8IV32 467 aaPredicted RBP6.1□□□□□ -1.43
SCAF4-204ENST00000467731 UEVLDQ8IX04 471 aa6.1□□□□□ -1.43
SCAF4-204ENST00000467731 OR9K2Q8NGE7 335 aa6.1□□□□□ -1.43
SCAF4-204ENST00000467731 ZNF775Q96BV0 537 aaPredicted RBP6.1□□□□□ -1.43
SCAF4-204ENST00000467731 RASD2Q96D21 266 aa6.1□□□□□ -1.43
SCAF4-204ENST00000467731 Q96M85 177 aa6.1□□□□□ -1.43
SCAF4-204ENST00000467731 TSPAN32Q96QS1 320 aa6.1□□□□□ -1.43
SCAF4-204ENST00000467731 EMC6Q9BV81 110 aa6.1□□□□□ -1.43
SCAF4-204ENST00000467731 SLC25A19Q9HC21 320 aa6.1□□□□□ -1.43
SCAF4-204ENST00000467731 RPRD1BQ9NQG5 326 aaKnown RBP6.1□□□□□ -1.43
SCAF4-204ENST00000467731 ING1Q9UK53 422 aaPredicted RBP6.1□□□□□ -1.43
SCAF4-204ENST00000467731 ZNF346Q9UL40 294 aaKnown RBP6.1□□□□□ -1.43
SCAF4-204ENST00000467731 COL12A1Q99715 3063 aa6.1□□□□□ -1.43
SCAF4-204ENST00000467731 A0A1W2PRG6 482 aa6.1□□□□□ -1.43
SCAF4-204ENST00000467731 LINC00587B1AMM8 73 aa6.1□□□□□ -1.43
SCAF4-204ENST00000467731 H0YAE9 185 aa6.1□□□□□ -1.43
SCAF4-204ENST00000467731 PSMD9O00233 223 aa6.1□□□□□ -1.43
SCAF4-204ENST00000467731 WDR1O75083 606 aa6.1□□□□□ -1.43
SCAF4-204ENST00000467731 SLC2A10O95528 541 aa6.1□□□□□ -1.43
SCAF4-204ENST00000467731 HIST1H1CP16403 213 aaKnown RBP6.1□□□□□ -1.43
SCAF4-204ENST00000467731 SDHAP31040 664 aa6.1□□□□□ -1.43
SCAF4-204ENST00000467731 GGT2P36268 569 aa6.1□□□□□ -1.43
SCAF4-204ENST00000467731 DBPQ10586 325 aaPredicted RBP6.1□□□□□ -1.43
SCAF4-204ENST00000467731 C1DQ13901 141 aaKnown RBP6.1□□□□□ -1.43
SCAF4-204ENST00000467731 ZNF846Q147U1 533 aa6.1□□□□□ -1.43
SCAF4-204ENST00000467731 RSBN1Q5VWQ0 802 aaPredicted RBP6.1□□□□□ -1.43
SCAF4-204ENST00000467731 TTC23Q5W5X9 447 aa6.1□□□□□ -1.43
SCAF4-204ENST00000467731 RTL6Q6ICC9 239 aa6.1□□□□□ -1.43
SCAF4-204ENST00000467731 CFAP161Q6P656 301 aa6.1□□□□□ -1.43
SCAF4-204ENST00000467731 NHLRC1Q6VVB1 395 aa6.1□□□□□ -1.43
SCAF4-204ENST00000467731 RPTNQ6XPR3 784 aa6.1□□□□□ -1.43
SCAF4-204ENST00000467731 CREB3L2Q70SY1 520 aa6.1□□□□□ -1.43
SCAF4-204ENST00000467731 SLC35D2Q76EJ3 337 aa6.1□□□□□ -1.43
SCAF4-204ENST00000467731 WDFY1Q8IWB7 410 aa6.1□□□□□ -1.43
SCAF4-204ENST00000467731 SLC43A2Q8N370 569 aa6.1□□□□□ -1.43
SCAF4-204ENST00000467731 RPRMLQ8N4K4 120 aa6.1□□□□□ -1.43
SCAF4-204ENST00000467731 UBE2FQ969M7 185 aa6.1□□□□□ -1.43
SCAF4-204ENST00000467731 ZNF385AQ96PM9 386 aaKnown RBP6.1□□□□□ -1.43
SCAF4-204ENST00000467731 PITX2Q99697 317 aa6.1□□□□□ -1.43
SCAF4-204ENST00000467731 DOK1Q99704 481 aa6.1□□□□□ -1.43
SCAF4-204ENST00000467731 SF3B5Q9BWJ5 86 aaKnown RBP6.1□□□□□ -1.43
SCAF4-204ENST00000467731 CDADC1Q9BWV3 514 aa6.1□□□□□ -1.43
SCAF4-204ENST00000467731 TXNIPQ9H3M7 391 aa6.1□□□□□ -1.43
SCAF4-204ENST00000467731 TVP23BQ9NYZ1 205 aa6.1□□□□□ -1.43
SCAF4-204ENST00000467731 KLHL9Q9P2J3 617 aa6.1□□□□□ -1.43
SCAF4-204ENST00000467731 GRHPRQ9UBQ7 328 aa6.1□□□□□ -1.43
SCAF4-204ENST00000467731 ZNF462Q96JM2 2506 aa6.1□□□□□ -1.43
SCAF4-204ENST00000467731 TEX13CA0A0J9YWL9 993 aa6.09□□□□□ -1.43
SCAF4-204ENST00000467731 LOC102725191A0A1B0GVB3 256 aa6.09□□□□□ -1.43
SCAF4-204ENST00000467731 PRRG2O14669 202 aa6.09□□□□□ -1.43
SCAF4-204ENST00000467731 ARPC3O15145 178 aa6.09□□□□□ -1.43
SCAF4-204ENST00000467731 SURF4O15260 269 aa6.09□□□□□ -1.43
SCAF4-204ENST00000467731 CCNKO75909 580 aa6.09□□□□□ -1.43
SCAF4-204ENST00000467731 IGHMP01871 453 aa6.09□□□□□ -1.43
SCAF4-204ENST00000467731 PRB1P04280 392 aa6.09□□□□□ -1.43
SCAF4-204ENST00000467731 GABRA1P14867 456 aa6.09□□□□□ -1.43
SCAF4-204ENST00000467731 TTKP33981 857 aa6.09□□□□□ -1.43
SCAF4-204ENST00000467731 HTR2BP41595 481 aa6.09□□□□□ -1.43
SCAF4-204ENST00000467731 CAPZA2P47755 286 aa6.09□□□□□ -1.43
SCAF4-204ENST00000467731 RBPJQ06330 500 aa6.09□□□□□ -1.43
SCAF4-204ENST00000467731 SNAPC1Q16533 368 aa6.09□□□□□ -1.43
SCAF4-204ENST00000467731 MESTQ5EB52 335 aa6.09□□□□□ -1.43
SCAF4-204ENST00000467731 FAM76BQ5HYJ3 339 aa6.09□□□□□ -1.43
SCAF4-204ENST00000467731 CASP12Q6UXS9 341 aa6.09□□□□□ -1.43
SCAF4-204ENST00000467731 SLC16A12Q6ZSM3 486 aa6.09□□□□□ -1.43
SCAF4-204ENST00000467731 P4HA3Q7Z4N8 544 aa6.09□□□□□ -1.43
SCAF4-204ENST00000467731 ST6GALNAC3Q8NDV1 305 aa6.09□□□□□ -1.43
SCAF4-204ENST00000467731 MUS81Q96NY9 551 aa6.09□□□□□ -1.43
SCAF4-204ENST00000467731 RNF122Q9H9V4 155 aa6.09□□□□□ -1.43
SCAF4-204ENST00000467731 SH3BGRL2Q9UJC5 107 aa6.09□□□□□ -1.43
SCAF4-204ENST00000467731 ZNF835Q9Y2P0 537 aa6.09□□□□□ -1.43
SCAF4-204ENST00000467731 GPR52Q9Y2T5 361 aa6.09□□□□□ -1.43
SCAF4-204ENST00000467731 PRELID3BQ9Y3B1 194 aa6.09□□□□□ -1.43
SCAF4-204ENST00000467731 FAM215AQ9Y5M1 114 aa6.09□□□□□ -1.43
SCAF4-204ENST00000467731 FLVCR1Q9Y5Y0 555 aa6.09□□□□□ -1.43
SCAF4-204ENST00000467731 SLC35F4A4IF30 521 aa6.09□□□□□ -1.43
SCAF4-204ENST00000467731 NPIPB13A6NJU9 1138 aa6.09□□□□□ -1.43
SCAF4-204ENST00000467731 NPIPB4C9JG80 1138 aa6.09□□□□□ -1.43
SCAF4-204ENST00000467731 H7C1C5 153 aa6.09□□□□□ -1.43
SCAF4-204ENST00000467731 IMPA2O14732 288 aa6.09□□□□□ -1.43
SCAF4-204ENST00000467731 BCL10O95999 233 aa6.09□□□□□ -1.43
SCAF4-204ENST00000467731 CLEC2LP0C7M8 214 aa6.09□□□□□ -1.43
SCAF4-204ENST00000467731 FCGR2AP12318 317 aa6.09□□□□□ -1.43
SCAF4-204ENST00000467731 APEHP13798 732 aaKnown RBP6.09□□□□□ -1.43
SCAF4-204ENST00000467731 ZNF16P17020 682 aaPredicted RBP6.09□□□□□ -1.43
SCAF4-204ENST00000467731 ACVR2AP27037 513 aa6.09□□□□□ -1.43
SCAF4-204ENST00000467731 NTF4P34130 210 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms