RNA–Protein interactions for RNA: ENST00000467533.5

HDAC3-203, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-203ENST00000467533 ZNF879B4DU55 563 aa8.48□□□□□ -1.05
HDAC3-203ENST00000467533 E9PQ18 207 aa8.48□□□□□ -1.05
HDAC3-203ENST00000467533 G3V2L1 256 aa8.48□□□□□ -1.05
HDAC3-203ENST00000467533 HMGN4O00479 90 aa8.48□□□□□ -1.05
HDAC3-203ENST00000467533 FZD7O75084 574 aa8.48□□□□□ -1.05
HDAC3-203ENST00000467533 PEX11AO75192 247 aa8.48□□□□□ -1.05
HDAC3-203ENST00000467533 CPSF4O95639 269 aaKnown RBP8.48□□□□□ -1.05
HDAC3-203ENST00000467533 PRG2P13727 222 aa8.48□□□□□ -1.05
HDAC3-203ENST00000467533 WNT5AP41221 380 aa8.48□□□□□ -1.05
HDAC3-203ENST00000467533 MMP16P51512 607 aa8.48□□□□□ -1.05
HDAC3-203ENST00000467533 EFNB2P52799 333 aa8.48□□□□□ -1.05
HDAC3-203ENST00000467533 C11orf88Q6PI97 169 aa8.48□□□□□ -1.05
HDAC3-203ENST00000467533 LRRC74BQ6ZQY2 392 aa8.48□□□□□ -1.05
HDAC3-203ENST00000467533 C1orf122Q6ZSJ8 110 aa8.48□□□□□ -1.05
HDAC3-203ENST00000467533 RFPL4BQ6ZWI9 263 aa8.48□□□□□ -1.05
HDAC3-203ENST00000467533 ANKRD46Q86W74 232 aa8.48□□□□□ -1.05
HDAC3-203ENST00000467533 FNDC5Q8NAU1 212 aa8.48□□□□□ -1.05
HDAC3-203ENST00000467533 OR4F17Q8NGA8 305 aa8.48□□□□□ -1.05
HDAC3-203ENST00000467533 VANGL1Q8TAA9 524 aaPredicted RBP8.48□□□□□ -1.05
HDAC3-203ENST00000467533 ABHD4Q8TB40 342 aa8.48□□□□□ -1.05
HDAC3-203ENST00000467533 TWIST2Q8WVJ9 160 aa8.48□□□□□ -1.05
HDAC3-203ENST00000467533 TAAR8Q969N4 342 aa8.48□□□□□ -1.05
HDAC3-203ENST00000467533 OR4F4Q96R69 305 aa8.48□□□□□ -1.05
HDAC3-203ENST00000467533 TMEM246Q9BRR3 403 aa8.48□□□□□ -1.05
HDAC3-203ENST00000467533 FUT8Q9BYC5 575 aa8.48□□□□□ -1.05
HDAC3-203ENST00000467533 PPA2Q9H2U2 334 aa8.48□□□□□ -1.05
HDAC3-203ENST00000467533 MTHFD2LQ9H903 347 aaPredicted RBP8.48□□□□□ -1.05
HDAC3-203ENST00000467533 GAR1Q9NY12 217 aaKnown RBP8.48□□□□□ -1.05
HDAC3-203ENST00000467533 PRDM4Q9UKN5 801 aa8.48□□□□□ -1.05
HDAC3-203ENST00000467533 FAM96BQ9Y3D0 163 aa8.48□□□□□ -1.05
HDAC3-203ENST00000467533 DNAJC15Q9Y5T4 150 aa8.48□□□□□ -1.05
HDAC3-203ENST00000467533 A0A087WUJ7 227 aa8.47□□□□□ -1.05
HDAC3-203ENST00000467533 C5orf49A4QMS7 147 aa8.47□□□□□ -1.05
HDAC3-203ENST00000467533 TMEM233B4DJY2 109 aa8.47□□□□□ -1.05
HDAC3-203ENST00000467533 C22orf46C9J442 243 aa8.47□□□□□ -1.05
HDAC3-203ENST00000467533 MS4A18H0YCH9 400 aa8.47□□□□□ -1.05
HDAC3-203ENST00000467533 H3BSA7 217 aa8.47□□□□□ -1.05
HDAC3-203ENST00000467533 RNASET2O00584 256 aaKnown RBP8.47□□□□□ -1.05
HDAC3-203ENST00000467533 PHYHO14832 338 aa8.47□□□□□ -1.05
HDAC3-203ENST00000467533 SURF4O15260 269 aa8.47□□□□□ -1.05
HDAC3-203ENST00000467533 NPHS1O60500 1241 aa8.47□□□□□ -1.05
HDAC3-203ENST00000467533 CYB5R3P00387 301 aaPredicted RBP8.47□□□□□ -1.05
HDAC3-203ENST00000467533 VSIG10L2P0DP72 767 aa8.47□□□□□ -1.05
HDAC3-203ENST00000467533 NR2F1P10589 423 aa8.47□□□□□ -1.05
HDAC3-203ENST00000467533 STOMP27105 288 aa8.47□□□□□ -1.05
HDAC3-203ENST00000467533 EPHA3P29320 983 aa8.47□□□□□ -1.05
HDAC3-203ENST00000467533 ANXA11P50995 505 aaKnown RBP8.47□□□□□ -1.05
HDAC3-203ENST00000467533 BIDP55957 195 aa8.47□□□□□ -1.05
HDAC3-203ENST00000467533 PPP1CBP62140 327 aa8.47□□□□□ -1.05
HDAC3-203ENST00000467533 PUDPQ08623 228 aa8.47□□□□□ -1.05
HDAC3-203ENST00000467533 MS4A18Q3C1V0 323 aa8.47□□□□□ -1.05
HDAC3-203ENST00000467533 DMRTC1Q5HYR2 192 aa8.47□□□□□ -1.05
HDAC3-203ENST00000467533 METTL11BQ5VVY1 283 aa8.47□□□□□ -1.05
HDAC3-203ENST00000467533 IL23RQ5VWK5 629 aa8.47□□□□□ -1.05
HDAC3-203ENST00000467533 KANK2Q63ZY3 851 aa8.47□□□□□ -1.05
HDAC3-203ENST00000467533 WDR25Q64LD2 544 aaPredicted RBP8.47□□□□□ -1.05
HDAC3-203ENST00000467533 C5orf46Q6UWT4 87 aa8.47□□□□□ -1.05
HDAC3-203ENST00000467533 WDR88Q6ZMY6 472 aa8.47□□□□□ -1.05
HDAC3-203ENST00000467533 ZER1Q7Z7L7 766 aa8.47□□□□□ -1.05
HDAC3-203ENST00000467533 SERPINA11Q86U17 422 aa8.47□□□□□ -1.05
HDAC3-203ENST00000467533 RIMKLAQ8IXN7 391 aa8.47□□□□□ -1.05
HDAC3-203ENST00000467533 PDZD9Q8IXQ8 264 aa8.47□□□□□ -1.05
HDAC3-203ENST00000467533 SPERTQ8NA61 448 aa8.47□□□□□ -1.05
HDAC3-203ENST00000467533 OR52P1PQ8NH57 321 aa8.47□□□□□ -1.05
HDAC3-203ENST00000467533 TECTBQ96PL2 329 aa8.47□□□□□ -1.05
HDAC3-203ENST00000467533 OR2V2Q96R30 315 aa8.47□□□□□ -1.05
HDAC3-203ENST00000467533 RHOXF2Q9BQY4 288 aa8.47□□□□□ -1.05
HDAC3-203ENST00000467533 SLC35A5Q9BS91 424 aa8.47□□□□□ -1.05
HDAC3-203ENST00000467533 ASPNQ9BXN1 380 aa8.47□□□□□ -1.05
HDAC3-203ENST00000467533 GLTPQ9NZD2 209 aa8.47□□□□□ -1.05
HDAC3-203ENST00000467533 NOP53Q9NZM5 478 aaKnown RBP8.47□□□□□ -1.05
HDAC3-203ENST00000467533 ZNRD1Q9P1U0 126 aa8.47□□□□□ -1.05
HDAC3-203ENST00000467533 RPS6KB2Q9UBS0 482 aa8.47□□□□□ -1.05
HDAC3-203ENST00000467533 EMCNQ9ULC0 261 aa8.47□□□□□ -1.05
HDAC3-203ENST00000467533 TRAV36DV7A0A075B6V5 113 aa8.46□□□□□ -1.06
HDAC3-203ENST00000467533 LCE6AA0A183 80 aa8.46□□□□□ -1.06
HDAC3-203ENST00000467533 RNASEK-C17orf49H0YIS7 233 aa8.46□□□□□ -1.06
HDAC3-203ENST00000467533 FBXO24O75426 580 aa8.46□□□□□ -1.06
HDAC3-203ENST00000467533 FBP1P09467 338 aa8.46□□□□□ -1.06
HDAC3-203ENST00000467533 MMP9P14780 707 aa8.46□□□□□ -1.06
HDAC3-203ENST00000467533 AHCYP23526 432 aa8.46□□□□□ -1.06
HDAC3-203ENST00000467533 MSX2P35548 267 aaPredicted RBP8.46□□□□□ -1.06
HDAC3-203ENST00000467533 ETV4P43268 484 aa8.46□□□□□ -1.06
HDAC3-203ENST00000467533 DNAJB13P59910 316 aa8.46□□□□□ -1.06
HDAC3-203ENST00000467533 EMX1Q04741 257 aaPredicted RBP8.46□□□□□ -1.06
HDAC3-203ENST00000467533 TAF11Q15544 211 aa8.46□□□□□ -1.06
HDAC3-203ENST00000467533 ZNF404Q494X3 552 aa8.46□□□□□ -1.06
HDAC3-203ENST00000467533 RUNDC3AQ59EK9 446 aa8.46□□□□□ -1.06
HDAC3-203ENST00000467533 PABPC1L2AQ5JQF8 200 aa8.46□□□□□ -1.06
HDAC3-203ENST00000467533 CASC10Q5T4H9 136 aa8.46□□□□□ -1.06
HDAC3-203ENST00000467533 TIFABQ6ZNK6 161 aa8.46□□□□□ -1.06
HDAC3-203ENST00000467533 NET1Q7Z628 596 aaPredicted RBP8.46□□□□□ -1.06
HDAC3-203ENST00000467533 LRRC18Q8N456 261 aa8.46□□□□□ -1.06
HDAC3-203ENST00000467533 CCDC63Q8NA47 563 aa8.46□□□□□ -1.06
HDAC3-203ENST00000467533 OR4C13Q8NGP0 309 aa8.46□□□□□ -1.06
HDAC3-203ENST00000467533 OR2T6Q8NHC8 308 aa8.46□□□□□ -1.06
HDAC3-203ENST00000467533 ZNF420Q8TAQ5 688 aaPredicted RBP8.46□□□□□ -1.06
HDAC3-203ENST00000467533 TMEM54Q969K7 222 aa8.46□□□□□ -1.06
HDAC3-203ENST00000467533 MAGEB18Q96M61 343 aa8.46□□□□□ -1.06
HDAC3-203ENST00000467533 WDFY2Q96P53 400 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms