RNA–Protein interactions for RNA: ENST00000467263.1

SMC4-207, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-207ENST00000467263 SPECC1LQ69YQ0 1117 aa2.08□□□□□ -2.08
SMC4-207ENST00000467263 LRRC74BQ6ZQY2 392 aa2.08□□□□□ -2.08
SMC4-207ENST00000467263 HDDC2Q7Z4H3 204 aa2.08□□□□□ -2.08
SMC4-207ENST00000467263 PSTKQ8IV42 348 aaKnown RBP2.08□□□□□ -2.08
SMC4-207ENST00000467263 TRPV1Q8NER1 839 aa2.08□□□□□ -2.08
SMC4-207ENST00000467263 OR1L6Q8NGR2 347 aa2.08□□□□□ -2.08
SMC4-207ENST00000467263 LKAAEAR1Q8TD35 194 aa2.08□□□□□ -2.08
SMC4-207ENST00000467263 ABHD3Q8WU67 409 aa2.08□□□□□ -2.08
SMC4-207ENST00000467263 CREB3L1Q96BA8 519 aa2.08□□□□□ -2.08
SMC4-207ENST00000467263 TSGA13Q96PP4 275 aa2.08□□□□□ -2.08
SMC4-207ENST00000467263 SH3GL1Q99961 368 aa2.08□□□□□ -2.08
SMC4-207ENST00000467263 SLC25A2Q9BXI2 301 aa2.08□□□□□ -2.08
SMC4-207ENST00000467263 SYNDIG1Q9H7V2 258 aa2.08□□□□□ -2.08
SMC4-207ENST00000467263 GORASP2Q9H8Y8 452 aa2.08□□□□□ -2.08
SMC4-207ENST00000467263 WFDC1Q9HC57 220 aa2.08□□□□□ -2.08
SMC4-207ENST00000467263 CLEC4AQ9UMR7 237 aa2.08□□□□□ -2.08
SMC4-207ENST00000467263 ZNF233A6NK53 670 aa2.07□□□□□ -2.08
SMC4-207ENST00000467263 HAS3O00219 553 aa2.07□□□□□ -2.08
SMC4-207ENST00000467263 AIFM1O95831 613 aa2.07□□□□□ -2.08
SMC4-207ENST00000467263 OR56A5P0C7T3 313 aa2.07□□□□□ -2.08
SMC4-207ENST00000467263 EPS15P42566 896 aa2.07□□□□□ -2.08
SMC4-207ENST00000467263 ARG2P78540 354 aa2.07□□□□□ -2.08
SMC4-207ENST00000467263 TCP10Q12799 353 aa2.07□□□□□ -2.08
SMC4-207ENST00000467263 SNRNP35Q16560 246 aaKnown RBP2.07□□□□□ -2.08
SMC4-207ENST00000467263 GALNT17Q6IS24 598 aa2.07□□□□□ -2.08
SMC4-207ENST00000467263 TEX43Q6ZNM6 134 aa2.07□□□□□ -2.08
SMC4-207ENST00000467263 TMEM135Q86UB9 458 aa2.07□□□□□ -2.08
SMC4-207ENST00000467263 LRRC75A-AS1Q8N1F1 130 aa2.07□□□□□ -2.08
SMC4-207ENST00000467263 SDR9C7Q8NEX9 313 aa2.07□□□□□ -2.08
SMC4-207ENST00000467263 NOXO1Q8NFA2 376 aa2.07□□□□□ -2.08
SMC4-207ENST00000467263 IFT74Q96LB3 600 aa2.07□□□□□ -2.08
SMC4-207ENST00000467263 VCX2Q9H322 139 aa2.07□□□□□ -2.08
SMC4-207ENST00000467263 UVRAGQ9P2Y5 699 aa2.07□□□□□ -2.08
SMC4-207ENST00000467263 TNKS1BP1Q9C0C2 1729 aaKnown RBP2.06□□□□□ -2.08
SMC4-207ENST00000467263 IGLV1-50A0A075B6I6 118 aa2.06□□□□□ -2.08
SMC4-207ENST00000467263 A0A1W2PPV9 198 aa2.06□□□□□ -2.08
SMC4-207ENST00000467263 PCP4L1A6NKN8 68 aa2.06□□□□□ -2.08
SMC4-207ENST00000467263 NDC80O14777 642 aa2.06□□□□□ -2.08
SMC4-207ENST00000467263 PPP1R2P9O14990 202 aa2.06□□□□□ -2.08
SMC4-207ENST00000467263 RAB3DO95716 219 aa2.06□□□□□ -2.08
SMC4-207ENST00000467263 IGKV4-1P06312 121 aa2.06□□□□□ -2.08
SMC4-207ENST00000467263 ATP1B2P14415 290 aaPredicted RBP2.06□□□□□ -2.08
SMC4-207ENST00000467263 ETS2P15036 469 aa2.06□□□□□ -2.08
SMC4-207ENST00000467263 SSR1P43307 286 aaKnown RBP2.06□□□□□ -2.08
SMC4-207ENST00000467263 SEC61GP60059 68 aa2.06□□□□□ -2.08
SMC4-207ENST00000467263 PITPNAQ00169 270 aa2.06□□□□□ -2.08
SMC4-207ENST00000467263 CDC20Q12834 499 aa2.06□□□□□ -2.08
SMC4-207ENST00000467263 SF3A2Q15428 464 aaKnown RBP2.06□□□□□ -2.08
SMC4-207ENST00000467263 PTPN20Q4JDL3 420 aa2.06□□□□□ -2.08
SMC4-207ENST00000467263 SMUG1Q53HV7 270 aa2.06□□□□□ -2.08
SMC4-207ENST00000467263 ARL9Q6T311 187 aa2.06□□□□□ -2.08
SMC4-207ENST00000467263 SLC25A48Q6ZT89 311 aaKnown RBP2.06□□□□□ -2.08
SMC4-207ENST00000467263 NECAP1Q8NC96 275 aa2.06□□□□□ -2.08
SMC4-207ENST00000467263 OR4F6Q8NGB9 312 aa2.06□□□□□ -2.08
SMC4-207ENST00000467263 STMN2Q93045 179 aa2.06□□□□□ -2.08
SMC4-207ENST00000467263 PIK3IP1Q96FE7 263 aa2.06□□□□□ -2.08
SMC4-207ENST00000467263 SLC41A3Q96GZ6 507 aa2.06□□□□□ -2.08
SMC4-207ENST00000467263 ZNF681Q96N22 645 aa2.06□□□□□ -2.08
SMC4-207ENST00000467263 RNF5Q99942 180 aa2.06□□□□□ -2.08
SMC4-207ENST00000467263 UBE2ZQ9H832 354 aaPredicted RBP2.06□□□□□ -2.08
SMC4-207ENST00000467263 CTSFQ9UBX1 484 aa2.06□□□□□ -2.08
SMC4-207ENST00000467263 PEX16Q9Y5Y5 336 aa2.06□□□□□ -2.08
SMC4-207ENST00000467263 PSTPIP1O43586 416 aa2.05□□□□□ -2.08
SMC4-207ENST00000467263 CT62P0C5K7 136 aa2.05□□□□□ -2.08
SMC4-207ENST00000467263 UBTFL6P0CB48 400 aaPredicted RBP2.05□□□□□ -2.08
SMC4-207ENST00000467263 SLC11A1P49279 550 aa2.05□□□□□ -2.08
SMC4-207ENST00000467263 ZNF138P52744 262 aa2.05□□□□□ -2.08
SMC4-207ENST00000467263 AIF1P55008 147 aa2.05□□□□□ -2.08
SMC4-207ENST00000467263 UBE2HP62256 183 aa2.05□□□□□ -2.08
SMC4-207ENST00000467263 ZNF816Q0VGE8 651 aaPredicted RBP2.05□□□□□ -2.08
SMC4-207ENST00000467263 CLINT1Q14677 625 aa2.05□□□□□ -2.08
SMC4-207ENST00000467263 PON2Q15165 354 aa2.05□□□□□ -2.08
SMC4-207ENST00000467263 IMMTQ16891 758 aaKnown RBP2.05□□□□□ -2.08
SMC4-207ENST00000467263 ANKRD22Q5VYY1 191 aa2.05□□□□□ -2.08
SMC4-207ENST00000467263 SAXO2Q658L1 398 aa2.05□□□□□ -2.08
SMC4-207ENST00000467263 PLET1Q6UQ28 207 aa2.05□□□□□ -2.08
SMC4-207ENST00000467263 ASCL5Q7RTU5 278 aa2.05□□□□□ -2.08
SMC4-207ENST00000467263 H2BFWTQ7Z2G1 175 aa2.05□□□□□ -2.08
SMC4-207ENST00000467263 CALHM3Q86XJ0 350 aa2.05□□□□□ -2.08
SMC4-207ENST00000467263 PRSS58Q8IYP2 241 aa2.05□□□□□ -2.08
SMC4-207ENST00000467263 OR52M1Q8NGK5 317 aa2.05□□□□□ -2.08
SMC4-207ENST00000467263 COQ8AQ8NI60 647 aa2.05□□□□□ -2.08
SMC4-207ENST00000467263 NARS2Q96I59 477 aaKnown RBP2.05□□□□□ -2.08
SMC4-207ENST00000467263 RNF157Q96PX1 679 aa2.05□□□□□ -2.08
SMC4-207ENST00000467263 GON7Q9BXV9 100 aa2.05□□□□□ -2.08
SMC4-207ENST00000467263 SAV1Q9H4B6 383 aaPredicted RBP2.05□□□□□ -2.08
SMC4-207ENST00000467263 FN3KRPQ9HA64 309 aa2.05□□□□□ -2.08
SMC4-207ENST00000467263 KCNJ16Q9NPI9 418 aa2.05□□□□□ -2.08
SMC4-207ENST00000467263 ISY1Q9ULR0 285 aaKnown RBP2.05□□□□□ -2.08
SMC4-207ENST00000467263 ZNF850A8MQ14 1090 aa2.04□□□□□ -2.08
SMC4-207ENST00000467263 A8MUU9 505 aa2.04□□□□□ -2.08
SMC4-207ENST00000467263 PTPRTO14522 1441 aa2.04□□□□□ -2.08
SMC4-207ENST00000467263 SOX15O60248 233 aa2.04□□□□□ -2.08
SMC4-207ENST00000467263 TMEM50AO95807 157 aa2.04□□□□□ -2.08
SMC4-207ENST00000467263 IL1BP01584 269 aa2.04□□□□□ -2.08
SMC4-207ENST00000467263 FGGP02679 453 aa2.04□□□□□ -2.08
SMC4-207ENST00000467263 IL4P05112 153 aa2.04□□□□□ -2.08
SMC4-207ENST00000467263 ZNF806P0C7X5 589 aa2.04□□□□□ -2.08
SMC4-207ENST00000467263 GLRA2P23416 452 aa2.04□□□□□ -2.08
SMC4-207ENST00000467263 ACTG2P63267 376 aa2.04□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms