RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 TTC23LQ6PF05 361 aa2.86□□□□□ -1.95
CDC42BPA-211ENST00000466538 TEX43Q6ZNM6 134 aa2.86□□□□□ -1.95
CDC42BPA-211ENST00000466538 LINC00173Q6ZV60 143 aa2.86□□□□□ -1.95
CDC42BPA-211ENST00000466538 STRADAQ7RTN6 431 aa2.86□□□□□ -1.95
CDC42BPA-211ENST00000466538 ZNF502Q8TBZ5 544 aa2.86□□□□□ -1.95
CDC42BPA-211ENST00000466538 SLC7A13Q8TCU3 470 aa2.86□□□□□ -1.95
CDC42BPA-211ENST00000466538 C8orf44Q96CB5 159 aa2.86□□□□□ -1.95
CDC42BPA-211ENST00000466538 DNAJC19Q96DA6 116 aa2.86□□□□□ -1.95
CDC42BPA-211ENST00000466538 DNAJC1Q96KC8 554 aaKnown RBP2.86□□□□□ -1.95
CDC42BPA-211ENST00000466538 SERPINB12Q96P63 405 aa2.86□□□□□ -1.95
CDC42BPA-211ENST00000466538 LZTS2Q9BRK4 669 aa2.86□□□□□ -1.95
CDC42BPA-211ENST00000466538 HDHD3Q9BSH5 251 aaPredicted RBP2.86□□□□□ -1.95
CDC42BPA-211ENST00000466538 SLC25A39Q9BZJ4 359 aaPredicted RBP2.86□□□□□ -1.95
CDC42BPA-211ENST00000466538 IFI27L2Q9H2X8 130 aa2.86□□□□□ -1.95
CDC42BPA-211ENST00000466538 GEMIN7Q9H840 131 aaKnown RBP2.86□□□□□ -1.95
CDC42BPA-211ENST00000466538 TMEM165Q9HC07 324 aa2.86□□□□□ -1.95
CDC42BPA-211ENST00000466538 LYARQ9NX58 379 aaKnown RBP2.86□□□□□ -1.95
CDC42BPA-211ENST00000466538 GCNT4Q9P109 453 aa2.86□□□□□ -1.95
CDC42BPA-211ENST00000466538 CD84Q9UIB8 345 aa2.86□□□□□ -1.95
CDC42BPA-211ENST00000466538 KIAA1257Q9ULG3 409 aa2.86□□□□□ -1.95
CDC42BPA-211ENST00000466538 TDRD6O60522 2096 aaKnown RBP2.86□□□□□ -1.95
CDC42BPA-211ENST00000466538 TRBV9A0A0B4J1U6 114 aa2.85□□□□□ -1.95
CDC42BPA-211ENST00000466538 GLYATL1P3A0A0U1RQE8 302 aa2.85□□□□□ -1.95
CDC42BPA-211ENST00000466538 SMCO2A6NFE2 343 aa2.85□□□□□ -1.95
CDC42BPA-211ENST00000466538 WRBO00258 174 aa2.85□□□□□ -1.95
CDC42BPA-211ENST00000466538 KMOO15229 486 aa2.85□□□□□ -1.95
CDC42BPA-211ENST00000466538 CHST1O43916 411 aa2.85□□□□□ -1.95
CDC42BPA-211ENST00000466538 SRP72O76094 671 aaKnown RBP2.85□□□□□ -1.95
CDC42BPA-211ENST00000466538 UTS2O95399 124 aa2.85□□□□□ -1.95
CDC42BPA-211ENST00000466538 SERPINA5P05154 406 aa2.85□□□□□ -1.95
CDC42BPA-211ENST00000466538 CCNB1P14635 433 aa2.85□□□□□ -1.95
CDC42BPA-211ENST00000466538 ZNF30P17039 623 aa2.85□□□□□ -1.95
CDC42BPA-211ENST00000466538 CNR1P21554 472 aa2.85□□□□□ -1.95
CDC42BPA-211ENST00000466538 CXCL5P42830 114 aa2.85□□□□□ -1.95
CDC42BPA-211ENST00000466538 MNAT1P51948 309 aa2.85□□□□□ -1.95
CDC42BPA-211ENST00000466538 NUTF2P61970 127 aaKnown RBP2.85□□□□□ -1.95
CDC42BPA-211ENST00000466538 PAX5Q02548 391 aa2.85□□□□□ -1.95
CDC42BPA-211ENST00000466538 CAPRIN1Q14444 709 aaKnown RBP2.85□□□□□ -1.95
CDC42BPA-211ENST00000466538 PON3Q15166 354 aa2.85□□□□□ -1.95
CDC42BPA-211ENST00000466538 SF3A2Q15428 464 aaKnown RBP2.85□□□□□ -1.95
CDC42BPA-211ENST00000466538 HSDL1Q3SXM5 330 aa2.85□□□□□ -1.95
CDC42BPA-211ENST00000466538 ZNF493Q6ZR52 646 aa2.85□□□□□ -1.95
CDC42BPA-211ENST00000466538 PCP2Q8IVA1 136 aa2.85□□□□□ -1.95
CDC42BPA-211ENST00000466538 GABRG1Q8N1C3 465 aa2.85□□□□□ -1.95
CDC42BPA-211ENST00000466538 CCDC148Q8NFR7 591 aa2.85□□□□□ -1.95
CDC42BPA-211ENST00000466538 OR4S2Q8NH73 311 aa2.85□□□□□ -1.95
CDC42BPA-211ENST00000466538 C11orf70Q9BRQ4 267 aa2.85□□□□□ -1.95
CDC42BPA-211ENST00000466538 CDC42EP4Q9H3Q1 356 aaKnown RBP2.85□□□□□ -1.95
CDC42BPA-211ENST00000466538 AUNIPQ9H7T9 357 aa2.85□□□□□ -1.95
CDC42BPA-211ENST00000466538 SLCO1B3Q9NPD5 702 aa2.85□□□□□ -1.95
CDC42BPA-211ENST00000466538 ZNF331Q9NQX6 463 aaPredicted RBP2.85□□□□□ -1.95
CDC42BPA-211ENST00000466538 HRASLS2Q9NWW9 162 aa2.85□□□□□ -1.95
CDC42BPA-211ENST00000466538 COL22A1Q8NFW1 1626 aaPredicted RBP2.84□□□□□ -1.95
CDC42BPA-211ENST00000466538 ZNF816-ZNF321PA0A0X1KG74 233 aa2.84□□□□□ -1.95
CDC42BPA-211ENST00000466538 LYRM9A8MSI8 78 aa2.84□□□□□ -1.95
CDC42BPA-211ENST00000466538 H0YHG0 523 aa2.84□□□□□ -1.95
CDC42BPA-211ENST00000466538 EIF4E2O60573 245 aaKnown RBP2.84□□□□□ -1.95
CDC42BPA-211ENST00000466538 HUS1O60921 280 aa2.84□□□□□ -1.95
CDC42BPA-211ENST00000466538 ICOSLGO75144 302 aa2.84□□□□□ -1.95
CDC42BPA-211ENST00000466538 CTAG2O75638 210 aa2.84□□□□□ -1.95
CDC42BPA-211ENST00000466538 FGFR1OPO95684 399 aaKnown RBP2.84□□□□□ -1.95
CDC42BPA-211ENST00000466538 AIFM1O95831 613 aa2.84□□□□□ -1.95
CDC42BPA-211ENST00000466538 GTF2E2P29084 291 aaKnown RBP2.84□□□□□ -1.95
CDC42BPA-211ENST00000466538 GPX4P36969 197 aaPredicted RBP2.84□□□□□ -1.95
CDC42BPA-211ENST00000466538 ATP5OP48047 213 aa2.84□□□□□ -1.95
CDC42BPA-211ENST00000466538 MRPL19P49406 292 aaKnown RBP2.84□□□□□ -1.95
CDC42BPA-211ENST00000466538 STXBP1P61764 594 aaKnown RBP2.84□□□□□ -1.95
CDC42BPA-211ENST00000466538 MECOMQ03112 1051 aa2.84□□□□□ -1.95
CDC42BPA-211ENST00000466538 LIPEQ05469 1076 aa2.84□□□□□ -1.95
CDC42BPA-211ENST00000466538 RSPO1Q2MKA7 263 aaPredicted RBP2.84□□□□□ -1.95
CDC42BPA-211ENST00000466538 ALKBH6Q3KRA9 238 aa2.84□□□□□ -1.95
CDC42BPA-211ENST00000466538 XKR4Q5GH76 650 aa2.84□□□□□ -1.95
CDC42BPA-211ENST00000466538 PPM1LQ5SGD2 360 aa2.84□□□□□ -1.95
CDC42BPA-211ENST00000466538 THEM4Q5T1C6 240 aa2.84□□□□□ -1.95
CDC42BPA-211ENST00000466538 TMEM220Q6QAJ8 160 aa2.84□□□□□ -1.95
CDC42BPA-211ENST00000466538 IGFL2Q6UWQ7 119 aa2.84□□□□□ -1.95
CDC42BPA-211ENST00000466538 EIF3MQ7L2H7 374 aaKnown RBP2.84□□□□□ -1.95
CDC42BPA-211ENST00000466538 TMEM150AQ86TG1 271 aa2.84□□□□□ -1.95
CDC42BPA-211ENST00000466538 LINC01551Q86U37 167 aa2.84□□□□□ -1.95
CDC42BPA-211ENST00000466538 OAFQ86UD1 273 aa2.84□□□□□ -1.95
CDC42BPA-211ENST00000466538 MMAAQ8IVH4 418 aaKnown RBP2.84□□□□□ -1.95
CDC42BPA-211ENST00000466538 ZNF433Q8N7K0 673 aaPredicted RBP2.84□□□□□ -1.95
CDC42BPA-211ENST00000466538 PRELID2Q8N945 189 aa2.84□□□□□ -1.95
CDC42BPA-211ENST00000466538 OR10G4Q8NGN3 311 aa2.84□□□□□ -1.95
CDC42BPA-211ENST00000466538 SRSF12Q8WXF0 261 aaKnown RBP2.84□□□□□ -1.95
CDC42BPA-211ENST00000466538 TMEM158Q8WZ71 300 aa2.84□□□□□ -1.95
CDC42BPA-211ENST00000466538 FAM3DQ96BQ1 224 aa2.84□□□□□ -1.95
CDC42BPA-211ENST00000466538 PANX1Q96RD7 426 aa2.84□□□□□ -1.95
CDC42BPA-211ENST00000466538 ANP32EQ9BTT0 268 aa2.84□□□□□ -1.95
CDC42BPA-211ENST00000466538 PARP12Q9H0J9 701 aaKnown RBP2.84□□□□□ -1.95
CDC42BPA-211ENST00000466538 C20orf96Q9NUD7 363 aaPredicted RBP2.84□□□□□ -1.95
CDC42BPA-211ENST00000466538 CCDC59Q9P031 241 aaKnown RBP2.84□□□□□ -1.95
CDC42BPA-211ENST00000466538 ZNF629Q9UEG4 869 aaPredicted RBP2.84□□□□□ -1.95
CDC42BPA-211ENST00000466538 WSB1Q9Y6I7 421 aa2.84□□□□□ -1.95
CDC42BPA-211ENST00000466538 MAP3K15Q6ZN16 1313 aa2.84□□□□□ -1.96
CDC42BPA-211ENST00000466538 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.83□□□□□ -1.96
CDC42BPA-211ENST00000466538 SERTM2A0A1B0GWG4 89 aa2.83□□□□□ -1.96
CDC42BPA-211ENST00000466538 HIDE1A8MVS5 230 aa2.83□□□□□ -1.96
CDC42BPA-211ENST00000466538 F6UB75 175 aa2.83□□□□□ -1.96
CDC42BPA-211ENST00000466538 ERCC1P07992 297 aaPredicted RBP2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms