RNA–Protein interactions for RNA: ENST00000466017.1

VPS41-211, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-211ENST00000466017 HIST3H3Q16695 136 aa4.87□□□□□ -1.63
VPS41-211ENST00000466017 ZNF324BQ6AW86 544 aaPredicted RBP4.87□□□□□ -1.63
VPS41-211ENST00000466017 TMEM225Q6GV28 225 aa4.87□□□□□ -1.63
VPS41-211ENST00000466017 ZNF773Q6PK81 442 aa4.87□□□□□ -1.63
VPS41-211ENST00000466017 B3GNT6Q6ZMB0 384 aa4.87□□□□□ -1.63
VPS41-211ENST00000466017 ZBTB46Q86UZ6 589 aa4.87□□□□□ -1.63
VPS41-211ENST00000466017 MEX3DQ86XN8 651 aaKnown RBP4.87□□□□□ -1.63
VPS41-211ENST00000466017 SIAH3Q8IW03 269 aa4.87□□□□□ -1.63
VPS41-211ENST00000466017 PM20D2Q8IYS1 436 aa4.87□□□□□ -1.63
VPS41-211ENST00000466017 C10orf53Q8N6V4 93 aa4.87□□□□□ -1.63
VPS41-211ENST00000466017 TMEM99Q8N816 258 aa4.87□□□□□ -1.63
VPS41-211ENST00000466017 ZNF540Q8NDQ6 660 aa4.87□□□□□ -1.63
VPS41-211ENST00000466017 BPIFB6Q8NFQ5 453 aa4.87□□□□□ -1.63
VPS41-211ENST00000466017 TSPAN14Q8NG11 270 aa4.87□□□□□ -1.63
VPS41-211ENST00000466017 OR52E2Q8NGJ4 325 aa4.87□□□□□ -1.63
VPS41-211ENST00000466017 CNIH3Q8TBE1 160 aa4.87□□□□□ -1.63
VPS41-211ENST00000466017 ZPLD1Q8TCW7 415 aa4.87□□□□□ -1.63
VPS41-211ENST00000466017 GCDHQ92947 438 aaPredicted RBP4.87□□□□□ -1.63
VPS41-211ENST00000466017 PNPLA2Q96AD5 504 aa4.87□□□□□ -1.63
VPS41-211ENST00000466017 SLC25A36Q96CQ1 311 aa4.87□□□□□ -1.63
VPS41-211ENST00000466017 ZNF503Q96F45 646 aa4.87□□□□□ -1.63
VPS41-211ENST00000466017 WBP1Q96G27 269 aa4.87□□□□□ -1.63
VPS41-211ENST00000466017 WDYHV1Q96HA8 205 aa4.87□□□□□ -1.63
VPS41-211ENST00000466017 PLEKHA8Q96JA3 519 aa4.87□□□□□ -1.63
VPS41-211ENST00000466017 LRR1Q96L50 414 aa4.87□□□□□ -1.63
VPS41-211ENST00000466017 OR5B2Q96R09 309 aa4.87□□□□□ -1.63
VPS41-211ENST00000466017 IL4I1Q96RQ9 567 aa4.87□□□□□ -1.63
VPS41-211ENST00000466017 MYCBPQ99417 103 aaPredicted RBP4.87□□□□□ -1.63
VPS41-211ENST00000466017 MNTQ99583 582 aa4.87□□□□□ -1.63
VPS41-211ENST00000466017 TEAD3Q99594 435 aa4.87□□□□□ -1.63
VPS41-211ENST00000466017 TIMP4Q99727 224 aa4.87□□□□□ -1.63
VPS41-211ENST00000466017 TUBA1CQ9BQE3 449 aa4.87□□□□□ -1.63
VPS41-211ENST00000466017 ALG12Q9BV10 488 aa4.87□□□□□ -1.63
VPS41-211ENST00000466017 KATNB1Q9BVA0 655 aa4.87□□□□□ -1.63
VPS41-211ENST00000466017 RACGAP1Q9H0H5 632 aa4.87□□□□□ -1.63
VPS41-211ENST00000466017 TMPRSS5Q9H3S3 457 aa4.87□□□□□ -1.63
VPS41-211ENST00000466017 PRORYQ9H606 182 aa4.87□□□□□ -1.63
VPS41-211ENST00000466017 MARCH7Q9H992 704 aa4.87□□□□□ -1.63
VPS41-211ENST00000466017 ISYNA1Q9NPH2 558 aa4.87□□□□□ -1.63
VPS41-211ENST00000466017 HINT3Q9NQE9 182 aaKnown RBP4.87□□□□□ -1.63
VPS41-211ENST00000466017 KLHL1Q9NR64 748 aa4.87□□□□□ -1.63
VPS41-211ENST00000466017 INPP5EQ9NRR6 644 aa4.87□□□□□ -1.63
VPS41-211ENST00000466017 GLRX2Q9NS18 164 aa4.87□□□□□ -1.63
VPS41-211ENST00000466017 RASSF1Q9NS23 344 aa4.87□□□□□ -1.63
VPS41-211ENST00000466017 NDUFA13Q9P0J0 144 aa4.87□□□□□ -1.63
VPS41-211ENST00000466017 KLHL9Q9P2J3 617 aa4.87□□□□□ -1.63
VPS41-211ENST00000466017 B3GAT1Q9P2W7 334 aa4.87□□□□□ -1.63
VPS41-211ENST00000466017 B3GNT3Q9Y2A9 372 aa4.87□□□□□ -1.63
VPS41-211ENST00000466017 SPEGQ15772 3267 aa4.86□□□□□ -1.63
VPS41-211ENST00000466017 PRSS37A4D1T9 235 aa4.86□□□□□ -1.63
VPS41-211ENST00000466017 OR6C68A6NDL8 312 aa4.86□□□□□ -1.63
VPS41-211ENST00000466017 OR6C65A6NJZ3 312 aa4.86□□□□□ -1.63
VPS41-211ENST00000466017 RIIAD1A6NNX1 92 aa4.86□□□□□ -1.63
VPS41-211ENST00000466017 ZNF724A8MTY0 619 aa4.86□□□□□ -1.63
VPS41-211ENST00000466017 GPR171O14626 319 aa4.86□□□□□ -1.63
VPS41-211ENST00000466017 RNF13O43567 381 aa4.86□□□□□ -1.63
VPS41-211ENST00000466017 RGS10O43665 173 aa4.86□□□□□ -1.63
VPS41-211ENST00000466017 TRAF3IP2O43734 574 aaPredicted RBP4.86□□□□□ -1.63
VPS41-211ENST00000466017 XPNPEP2O43895 674 aa4.86□□□□□ -1.63
VPS41-211ENST00000466017 FAM20BO75063 409 aa4.86□□□□□ -1.63
VPS41-211ENST00000466017 TRMUO75648 421 aaKnown RBP4.86□□□□□ -1.63
VPS41-211ENST00000466017 ZNF432O94892 652 aa4.86□□□□□ -1.63
VPS41-211ENST00000466017 GLCEO94923 617 aa4.86□□□□□ -1.63
VPS41-211ENST00000466017 AKR7A3O95154 331 aa4.86□□□□□ -1.63
VPS41-211ENST00000466017 SLC2A10O95528 541 aa4.86□□□□□ -1.63
VPS41-211ENST00000466017 FADS2O95864 444 aaKnown RBP4.86□□□□□ -1.63
VPS41-211ENST00000466017 CLPTM1O96005 669 aa4.86□□□□□ -1.63
VPS41-211ENST00000466017 F10P00742 488 aa4.86□□□□□ -1.63
VPS41-211ENST00000466017 RENP00797 406 aa4.86□□□□□ -1.63
VPS41-211ENST00000466017 OR2T7P0C7T2 308 aa4.86□□□□□ -1.63
VPS41-211ENST00000466017 SMIM18P0DKX4 95 aa4.86□□□□□ -1.63
VPS41-211ENST00000466017 DBTP11182 482 aaKnown RBP4.86□□□□□ -1.63
VPS41-211ENST00000466017 ZNF43P17038 809 aa4.86□□□□□ -1.63
VPS41-211ENST00000466017 PCMT1P22061 227 aa4.86□□□□□ -1.63
VPS41-211ENST00000466017 ENPP1P22413 925 aa4.86□□□□□ -1.63
VPS41-211ENST00000466017 AHCYP23526 432 aa4.86□□□□□ -1.63
VPS41-211ENST00000466017 SHC1P29353 583 aa4.86□□□□□ -1.63
VPS41-211ENST00000466017 CRABP1P29762 137 aa4.86□□□□□ -1.63
VPS41-211ENST00000466017 FMO3P31513 532 aa4.86□□□□□ -1.63
VPS41-211ENST00000466017 PTGER4P35408 488 aa4.86□□□□□ -1.63
VPS41-211ENST00000466017 ACVR1BP36896 505 aa4.86□□□□□ -1.63
VPS41-211ENST00000466017 RPS19P39019 145 aaKnown RBP4.86□□□□□ -1.63
VPS41-211ENST00000466017 CAPZA2P47755 286 aa4.86□□□□□ -1.63
VPS41-211ENST00000466017 MTNR1AP48039 350 aa4.86□□□□□ -1.63
VPS41-211ENST00000466017 CDH11P55287 796 aa4.86□□□□□ -1.63
VPS41-211ENST00000466017 ERVK-25P63136 954 aa4.86□□□□□ -1.63
VPS41-211ENST00000466017 HSF2Q03933 536 aa4.86□□□□□ -1.63
VPS41-211ENST00000466017 ACSM1Q08AH1 577 aa4.86□□□□□ -1.63
VPS41-211ENST00000466017 CRMP1Q14194 572 aa4.86□□□□□ -1.63
VPS41-211ENST00000466017 PON3Q15166 354 aa4.86□□□□□ -1.63
VPS41-211ENST00000466017 TOMM20Q15388 145 aa4.86□□□□□ -1.63
VPS41-211ENST00000466017 ACKR1Q16570 336 aa4.86□□□□□ -1.63
VPS41-211ENST00000466017 LINC00303Q3SY05 128 aa4.86□□□□□ -1.63
VPS41-211ENST00000466017 NRN1LQ496H8 165 aa4.86□□□□□ -1.63
VPS41-211ENST00000466017 TEX30Q5JUR7 227 aa4.86□□□□□ -1.63
VPS41-211ENST00000466017 CLEC12AQ5QGZ9 265 aa4.86□□□□□ -1.63
VPS41-211ENST00000466017 THEM4Q5T1C6 240 aa4.86□□□□□ -1.63
VPS41-211ENST00000466017 SYT6Q5T7P8 510 aaPredicted RBP4.86□□□□□ -1.63
VPS41-211ENST00000466017 LINC01590Q5TEZ4 76 aa4.86□□□□□ -1.63
VPS41-211ENST00000466017 LCN1P1Q5VSP4 162 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms