RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 ANXA8P13928 327 aa17.67■□□□□ 0.42
SKA3-205ENST00000465471 HIST1H1CP16403 213 aaKnown RBP17.67■□□□□ 0.42
SKA3-205ENST00000465471 ZNF14P17017 642 aaPredicted RBP17.67■□□□□ 0.42
SKA3-205ENST00000465471 CAPZA2P47755 286 aa17.67■□□□□ 0.42
SKA3-205ENST00000465471 GABPB1Q06547 395 aaPredicted RBP17.67■□□□□ 0.42
SKA3-205ENST00000465471 ETFDHQ16134 617 aa17.67■□□□□ 0.42
SKA3-205ENST00000465471 CLEC12AQ5QGZ9 265 aa17.67■□□□□ 0.42
SKA3-205ENST00000465471 FAHD1Q6P587 224 aa17.67■□□□□ 0.42
SKA3-205ENST00000465471 C20orf204Q6ZNR8 217 aa17.67■□□□□ 0.42
SKA3-205ENST00000465471 LNX2Q8N448 690 aa17.67■□□□□ 0.42
SKA3-205ENST00000465471 ZNF611Q8N823 705 aa17.67■□□□□ 0.42
SKA3-205ENST00000465471 IGFBPL1Q8WX77 278 aa17.67■□□□□ 0.42
SKA3-205ENST00000465471 NEUROG1Q92886 237 aa17.67■□□□□ 0.42
SKA3-205ENST00000465471 RAB3IPQ96QF0 476 aaPredicted RBP17.67■□□□□ 0.42
SKA3-205ENST00000465471 SH3GL3Q99963 347 aa17.67■□□□□ 0.42
SKA3-205ENST00000465471 HEATR1Q9H583 2144 aaKnown RBP17.67■□□□□ 0.42
SKA3-205ENST00000465471 UBTD1Q9HAC8 227 aa17.67■□□□□ 0.42
SKA3-205ENST00000465471 TBC1D23Q9NUY8 699 aa17.67■□□□□ 0.42
SKA3-205ENST00000465471 H3BNX3 289 aa17.66■□□□□ 0.42
SKA3-205ENST00000465471 MMP7P09237 267 aaPredicted RBP17.66■□□□□ 0.42
SKA3-205ENST00000465471 CD79AP11912 226 aa17.66■□□□□ 0.42
SKA3-205ENST00000465471 PRKACGP22612 351 aa17.66■□□□□ 0.42
SKA3-205ENST00000465471 NAAAQ02083 359 aa17.66■□□□□ 0.42
SKA3-205ENST00000465471 ZNF362Q5T0B9 420 aaPredicted RBP17.66■□□□□ 0.42
SKA3-205ENST00000465471 FAM27BQ5VT28 67 aa17.66■□□□□ 0.42
SKA3-205ENST00000465471 OR4Q3Q8NH05 313 aa17.66■□□□□ 0.42
SKA3-205ENST00000465471 OR5K1Q8NHB7 308 aa17.66■□□□□ 0.42
SKA3-205ENST00000465471 PYDC1Q8WXC3 89 aa17.66■□□□□ 0.42
SKA3-205ENST00000465471 LRTOMTQ8WZ04 291 aa17.66■□□□□ 0.42
SKA3-205ENST00000465471 DDOQ99489 341 aa17.66■□□□□ 0.42
SKA3-205ENST00000465471 BDH2Q9BUT1 245 aa17.66■□□□□ 0.42
SKA3-205ENST00000465471 TSSK6Q9BXA6 273 aa17.66■□□□□ 0.42
SKA3-205ENST00000465471 CCDC168Q8NDH2 2452 aa17.66■□□□□ 0.42
SKA3-205ENST00000465471 RAF1P04049 648 aa17.65■□□□□ 0.42
SKA3-205ENST00000465471 PATE4P0C8F1 98 aa17.65■□□□□ 0.42
SKA3-205ENST00000465471 CD53P19397 219 aa17.65■□□□□ 0.42
SKA3-205ENST00000465471 GIPRP48546 466 aa17.65■□□□□ 0.42
SKA3-205ENST00000465471 IDH3GP51553 393 aaPredicted RBP17.65■□□□□ 0.42
SKA3-205ENST00000465471 ARHGDIAP52565 204 aa17.65■□□□□ 0.42
SKA3-205ENST00000465471 CDH11P55287 796 aa17.65■□□□□ 0.42
SKA3-205ENST00000465471 RAB1AP62820 205 aa17.65■□□□□ 0.42
SKA3-205ENST00000465471 PIGFQ07326 219 aa17.65■□□□□ 0.42
SKA3-205ENST00000465471 SLC36A2Q495M3 483 aa17.65■□□□□ 0.42
SKA3-205ENST00000465471 SLC36A3Q495N2 470 aa17.65■□□□□ 0.42
SKA3-205ENST00000465471 ZFP1Q6P2D0 407 aa17.65■□□□□ 0.42
SKA3-205ENST00000465471 LEG1Q6P5S2 330 aa17.65■□□□□ 0.42
SKA3-205ENST00000465471 B3GLCTQ6Y288 498 aa17.65■□□□□ 0.42
SKA3-205ENST00000465471 SLC16A14Q7RTX9 510 aa17.65■□□□□ 0.42
SKA3-205ENST00000465471 JAZF1Q86VZ6 243 aa17.65■□□□□ 0.42
SKA3-205ENST00000465471 ZNF584Q8IVC4 421 aa17.65■□□□□ 0.42
SKA3-205ENST00000465471 NPEPL1Q8NDH3 523 aa17.65■□□□□ 0.42
SKA3-205ENST00000465471 OR2T33Q8NG76 320 aa17.65■□□□□ 0.42
SKA3-205ENST00000465471 OR4K13Q8NH42 304 aa17.65■□□□□ 0.42
SKA3-205ENST00000465471 DNAJC9Q8WXX5 260 aa17.65■□□□□ 0.42
SKA3-205ENST00000465471 NMNAT3Q96T66 252 aa17.65■□□□□ 0.42
SKA3-205ENST00000465471 NUAK2Q9H093 628 aa17.65■□□□□ 0.42
SKA3-205ENST00000465471 GABARAPL1Q9H0R8 117 aa17.65■□□□□ 0.42
SKA3-205ENST00000465471 POLE4Q9NR33 117 aa17.65■□□□□ 0.42
SKA3-205ENST00000465471 FBXL3Q9UKT7 428 aa17.65■□□□□ 0.42
SKA3-205ENST00000465471 BAIAP2Q9UQB8 552 aa17.65■□□□□ 0.42
SKA3-205ENST00000465471 PLEKHA6Q9Y2H5 1048 aa17.65■□□□□ 0.42
SKA3-205ENST00000465471 DSCAMO60469 2012 aa17.65■□□□□ 0.42
SKA3-205ENST00000465471 OTOGQ6ZRI0 2925 aa17.65■□□□□ 0.42
SKA3-205ENST00000465471 IGLV1-36A0A0B4J1U3 117 aa17.64■□□□□ 0.41
SKA3-205ENST00000465471 ATP6V1G2-DDX39BF2Z307 99 aa17.64■□□□□ 0.41
SKA3-205ENST00000465471 DCTN6O00399 190 aa17.64■□□□□ 0.41
SKA3-205ENST00000465471 SLC16A7O60669 478 aa17.64■□□□□ 0.41
SKA3-205ENST00000465471 KHDRBS3O75525 346 aaKnown RBP17.64■□□□□ 0.41
SKA3-205ENST00000465471 RAB36O95755 333 aa17.64■□□□□ 0.41
SKA3-205ENST00000465471 SCG5P05408 212 aa17.64■□□□□ 0.41
SKA3-205ENST00000465471 CST2P09228 141 aa17.64■□□□□ 0.41
SKA3-205ENST00000465471 DANCRP0C864 163 aa17.64■□□□□ 0.41
SKA3-205ENST00000465471 NOS3P29474 1203 aa17.64■□□□□ 0.41
SKA3-205ENST00000465471 CALCRP30988 508 aa17.64■□□□□ 0.41
SKA3-205ENST00000465471 PTDSS1P48651 473 aaKnown RBP17.64■□□□□ 0.41
SKA3-205ENST00000465471 KHDRBS1Q07666 443 aaKnown RBP eCLIP17.64■□□□□ 0.41
SKA3-205ENST00000465471 SLC22A25Q6T423 547 aa17.64■□□□□ 0.41
SKA3-205ENST00000465471 AMIGO2Q86SJ2 522 aa17.64■□□□□ 0.41
SKA3-205ENST00000465471 HIPK1Q86Z02 1210 aa17.64■□□□□ 0.41
SKA3-205ENST00000465471 SDR9C7Q8NEX9 313 aa17.64■□□□□ 0.41
SKA3-205ENST00000465471 FBXW5Q969U6 566 aa17.64■□□□□ 0.41
SKA3-205ENST00000465471 MBD6Q96DN6 1003 aa17.64■□□□□ 0.41
SKA3-205ENST00000465471 CENPNQ96H22 339 aaPredicted RBP17.64■□□□□ 0.41
SKA3-205ENST00000465471 MS4A3Q96HJ5 214 aa17.64■□□□□ 0.41
SKA3-205ENST00000465471 RACGAP1Q9H0H5 632 aa17.64■□□□□ 0.41
SKA3-205ENST00000465471 EDARQ9UNE0 448 aa17.64■□□□□ 0.41
SKA3-205ENST00000465471 MOKQ9UQ07 419 aa17.64■□□□□ 0.41
SKA3-205ENST00000465471 MYO9AB2RTY4 2548 aa17.64■□□□□ 0.41
SKA3-205ENST00000465471 IGHV2OR16-5A0A0B4J2B6 119 aa17.63■□□□□ 0.41
SKA3-205ENST00000465471 A0A1W2PPL8 197 aa17.63■□□□□ 0.41
SKA3-205ENST00000465471 OR6C68A6NDL8 312 aa17.63■□□□□ 0.41
SKA3-205ENST00000465471 E7EQL1 145 aa17.63■□□□□ 0.41
SKA3-205ENST00000465471 CRYAAP02489 173 aa17.63■□□□□ 0.41
SKA3-205ENST00000465471 OSMP13725 252 aa17.63■□□□□ 0.41
SKA3-205ENST00000465471 MSR1P21757 451 aa17.63■□□□□ 0.41
SKA3-205ENST00000465471 LAP3P28838 519 aa17.63■□□□□ 0.41
SKA3-205ENST00000465471 CRABP1P29762 137 aa17.63■□□□□ 0.41
SKA3-205ENST00000465471 DAPP51397 102 aa17.63■□□□□ 0.41
SKA3-205ENST00000465471 NPRL3Q12980 569 aa17.63■□□□□ 0.41
SKA3-205ENST00000465471 ENDOGQ14249 297 aaKnown RBP17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms