RNA–Protein interactions for RNA: ENST00000465269.5

HDAC6-214, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,139 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-214ENST00000465269 NQO1P15559 274 aaKnown RBP12.48□□□□□ -0.41
HDAC6-214ENST00000465269 WNT5AP41221 380 aa12.48□□□□□ -0.41
HDAC6-214ENST00000465269 EGR3Q06889 387 aa12.48□□□□□ -0.41
HDAC6-214ENST00000465269 TMEM155Q4W5P6 130 aa12.48□□□□□ -0.41
HDAC6-214ENST00000465269 ZNF774Q6NX45 483 aa12.48□□□□□ -0.41
HDAC6-214ENST00000465269 BTNL3Q6UXE8 466 aa12.48□□□□□ -0.41
HDAC6-214ENST00000465269 LRRN1Q6UXK5 716 aa12.48□□□□□ -0.41
HDAC6-214ENST00000465269 SLC25A40Q8TBP6 338 aa12.48□□□□□ -0.41
HDAC6-214ENST00000465269 RAB40AQ8WXH6 277 aa12.48□□□□□ -0.41
HDAC6-214ENST00000465269 LRR1Q96L50 414 aa12.48□□□□□ -0.41
HDAC6-214ENST00000465269 SIGLEC11Q96RL6 698 aa12.48□□□□□ -0.41
HDAC6-214ENST00000465269 ARHGDIGQ99819 225 aa12.48□□□□□ -0.41
HDAC6-214ENST00000465269 SSBP3Q9BWW4 388 aaPredicted RBP12.48□□□□□ -0.41
HDAC6-214ENST00000465269 BCL2L14Q9BZR8 327 aa12.48□□□□□ -0.41
HDAC6-214ENST00000465269 NOX4Q9NPH5 578 aa12.48□□□□□ -0.41
HDAC6-214ENST00000465269 FBXL3Q9UKT7 428 aa12.48□□□□□ -0.41
HDAC6-214ENST00000465269 ZNF443Q9Y2A4 671 aaPredicted RBP12.48□□□□□ -0.41
HDAC6-214ENST00000465269 A0A087WUJ7 227 aa12.47□□□□□ -0.41
HDAC6-214ENST00000465269 FZD7O75084 574 aa12.47□□□□□ -0.41
HDAC6-214ENST00000465269 MPIG6BO95866 241 aa12.47□□□□□ -0.41
HDAC6-214ENST00000465269 SFTPBP07988 381 aa12.47□□□□□ -0.41
HDAC6-214ENST00000465269 CSNK1A1P48729 337 aa12.47□□□□□ -0.41
HDAC6-214ENST00000465269 CLDN8P56748 225 aa12.47□□□□□ -0.41
HDAC6-214ENST00000465269 GNB2P62879 340 aa12.47□□□□□ -0.41
HDAC6-214ENST00000465269 TNFAIP6P98066 277 aaPredicted RBP12.47□□□□□ -0.41
HDAC6-214ENST00000465269 MOGQ16653 247 aa12.47□□□□□ -0.41
HDAC6-214ENST00000465269 TBC1D28Q2M2D7 210 aa12.47□□□□□ -0.41
HDAC6-214ENST00000465269 RUNDC3AQ59EK9 446 aa12.47□□□□□ -0.41
HDAC6-214ENST00000465269 RPS26P11Q5JNZ5 115 aaPredicted RBP12.47□□□□□ -0.41
HDAC6-214ENST00000465269 FAM205BPQ63HN1 556 aa12.47□□□□□ -0.41
HDAC6-214ENST00000465269 HOMEZQ8IX15 550 aa12.47□□□□□ -0.41
HDAC6-214ENST00000465269 PEX5LQ8IYB4 626 aa12.47□□□□□ -0.41
HDAC6-214ENST00000465269 KIRREL3Q8IZU9 778 aa12.47□□□□□ -0.41
HDAC6-214ENST00000465269 LYG1Q8N1E2 194 aa12.47□□□□□ -0.41
HDAC6-214ENST00000465269 TMEM86BQ8N661 226 aa12.47□□□□□ -0.41
HDAC6-214ENST00000465269 CPEB3Q8NE35 698 aaKnown RBP12.47□□□□□ -0.41
HDAC6-214ENST00000465269 OR4K5Q8NGD3 323 aa12.47□□□□□ -0.41
HDAC6-214ENST00000465269 DYRK2Q92630 601 aa12.47□□□□□ -0.41
HDAC6-214ENST00000465269 TUBGCP3Q96CW5 907 aa12.47□□□□□ -0.41
HDAC6-214ENST00000465269 MARS2Q96GW9 593 aaKnown RBP12.47□□□□□ -0.41
HDAC6-214ENST00000465269 OR2J1Q9GZK6 312 aa12.47□□□□□ -0.41
HDAC6-214ENST00000465269 NANOGQ9H9S0 305 aa12.47□□□□□ -0.41
HDAC6-214ENST00000465269 NECAP2Q9NVZ3 263 aa12.47□□□□□ -0.41
HDAC6-214ENST00000465269 A0A096LPI6 279 aa12.46□□□□□ -0.41
HDAC6-214ENST00000465269 ZNF816-ZNF321PA0A0X1KG74 233 aa12.46□□□□□ -0.41
HDAC6-214ENST00000465269 LOC102725191A0A1B0GVB3 256 aa12.46□□□□□ -0.41
HDAC6-214ENST00000465269 ZNF726A6NNF4 738 aa12.46□□□□□ -0.41
HDAC6-214ENST00000465269 HDAC3O15379 428 aa12.46□□□□□ -0.41
HDAC6-214ENST00000465269 EDF1O60869 148 aaKnown RBP12.46□□□□□ -0.41
HDAC6-214ENST00000465269 SNAP29O95721 258 aa12.46□□□□□ -0.41
HDAC6-214ENST00000465269 SF3A3Q12874 501 aaKnown RBP eCLIP12.46□□□□□ -0.41
HDAC6-214ENST00000465269 FAM69AQ5T7M9 428 aa12.46□□□□□ -0.41
HDAC6-214ENST00000465269 GPR157Q5UAW9 335 aa12.46□□□□□ -0.41
HDAC6-214ENST00000465269 LRFN4Q6PJG9 635 aa12.46□□□□□ -0.41
HDAC6-214ENST00000465269 RFPL4BQ6ZWI9 263 aa12.46□□□□□ -0.41
HDAC6-214ENST00000465269 PIWIL3Q7Z3Z3 882 aaKnown RBP12.46□□□□□ -0.41
HDAC6-214ENST00000465269 MAVSQ7Z434 540 aa12.46□□□□□ -0.41
HDAC6-214ENST00000465269 LRRC34Q8IZ02 419 aa12.46□□□□□ -0.41
HDAC6-214ENST00000465269 ZNF283Q8N7M2 679 aa12.46□□□□□ -0.41
HDAC6-214ENST00000465269 ZSCAN4Q8NAM6 433 aaPredicted RBP12.46□□□□□ -0.41
HDAC6-214ENST00000465269 KLF14Q8TD94 323 aaPredicted RBP12.46□□□□□ -0.41
HDAC6-214ENST00000465269 SSMEM1Q8WWF3 244 aa12.46□□□□□ -0.41
HDAC6-214ENST00000465269 PCGF1Q9BSM1 259 aa12.46□□□□□ -0.41
HDAC6-214ENST00000465269 CDADC1Q9BWV3 514 aa12.46□□□□□ -0.41
HDAC6-214ENST00000465269 WDR55Q9H6Y2 383 aaPredicted RBP12.46□□□□□ -0.41
HDAC6-214ENST00000465269 AKTIPQ9H8T0 292 aa12.46□□□□□ -0.41
HDAC6-214ENST00000465269 FGFR1OP2Q9NVK5 253 aa12.46□□□□□ -0.41
HDAC6-214ENST00000465269 TMEM38BQ9NVV0 291 aa12.46□□□□□ -0.41
HDAC6-214ENST00000465269 KLHL14Q9P2G3 628 aa12.46□□□□□ -0.41
HDAC6-214ENST00000465269 IL20RAQ9UHF4 553 aa12.46□□□□□ -0.41
HDAC6-214ENST00000465269 GPR45Q9Y5Y3 372 aa12.46□□□□□ -0.41
HDAC6-214ENST00000465269 POMT1Q9Y6A1 747 aa12.46□□□□□ -0.41
HDAC6-214ENST00000465269 USH1CQ9Y6N9 552 aa12.46□□□□□ -0.41
HDAC6-214ENST00000465269 PRSS51A0A1B0GVH4 220 aa12.45□□□□□ -0.42
HDAC6-214ENST00000465269 TRPC5OSA6NMA1 111 aa12.45□□□□□ -0.42
HDAC6-214ENST00000465269 RPS2P15880 293 aaKnown RBP12.45□□□□□ -0.42
HDAC6-214ENST00000465269 EPHA3P29320 983 aa12.45□□□□□ -0.42
HDAC6-214ENST00000465269 CDKN2CP42773 168 aa12.45□□□□□ -0.42
HDAC6-214ENST00000465269 BIDP55957 195 aa12.45□□□□□ -0.42
HDAC6-214ENST00000465269 ZNF718Q3SXZ3 478 aa12.45□□□□□ -0.42
HDAC6-214ENST00000465269 LIN52Q52LA3 116 aa12.45□□□□□ -0.42
HDAC6-214ENST00000465269 NXNQ6DKJ4 435 aa12.45□□□□□ -0.42
HDAC6-214ENST00000465269 TMEM53Q6P2H8 277 aa12.45□□□□□ -0.42
HDAC6-214ENST00000465269 LRRC18Q8N456 261 aa12.45□□□□□ -0.42
HDAC6-214ENST00000465269 FITM2Q8N6M3 262 aa12.45□□□□□ -0.42
HDAC6-214ENST00000465269 VPS37AQ8NEZ2 397 aa12.45□□□□□ -0.42
HDAC6-214ENST00000465269 FAM71F1Q96KD3 344 aaPredicted RBP12.45□□□□□ -0.42
HDAC6-214ENST00000465269 MOGAT1Q96PD6 335 aa12.45□□□□□ -0.42
HDAC6-214ENST00000465269 NUDT16L1Q9BRJ7 211 aaKnown RBP12.45□□□□□ -0.42
HDAC6-214ENST00000465269 CCDC134Q9H6E4 229 aa12.45□□□□□ -0.42
HDAC6-214ENST00000465269 MEAF6Q9HAF1 191 aa12.45□□□□□ -0.42
HDAC6-214ENST00000465269 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.45□□□□□ -0.42
HDAC6-214ENST00000465269 LRCH1Q9Y2L9 728 aa12.45□□□□□ -0.42
HDAC6-214ENST00000465269 SIGLEC9Q9Y336 463 aa12.45□□□□□ -0.42
HDAC6-214ENST00000465269 TRAV36DV7A0A075B6V5 113 aa12.44□□□□□ -0.42
HDAC6-214ENST00000465269 KIR2DS1A0A191URI9 304 aa12.44□□□□□ -0.42
HDAC6-214ENST00000465269 C11orf98E9PRG8 122 aa12.44□□□□□ -0.42
HDAC6-214ENST00000465269 SDHDO14521 159 aa12.44□□□□□ -0.42
HDAC6-214ENST00000465269 CD55P08174 381 aa12.44□□□□□ -0.42
HDAC6-214ENST00000465269 ADH4P08319 380 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms