RNA–Protein interactions for RNA: ENST00000464454.1

CLK1-208, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 484 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-208ENST00000464454 PITPNC1Q9UKF7 332 aa2.63□□□□□ -1.99
CLK1-208ENST00000464454 RAB26Q9ULW5 256 aa2.63□□□□□ -1.99
CLK1-208ENST00000464454 ING4Q9UNL4 249 aa2.63□□□□□ -1.99
CLK1-208ENST00000464454 NACAE9PAV3 2078 aa2.62□□□□□ -1.99
CLK1-208ENST00000464454 AKNAQ7Z591 1439 aa2.62□□□□□ -1.99
CLK1-208ENST00000464454 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.62□□□□□ -1.99
CLK1-208ENST00000464454 A0A075B6Q4 140 aa2.62□□□□□ -1.99
CLK1-208ENST00000464454 CIB4A0PJX0 185 aa2.62□□□□□ -1.99
CLK1-208ENST00000464454 TCP11X1B4DZS4 312 aa2.62□□□□□ -1.99
CLK1-208ENST00000464454 F6UB75 175 aa2.62□□□□□ -1.99
CLK1-208ENST00000464454 DFNA5O60443 496 aa2.62□□□□□ -1.99
CLK1-208ENST00000464454 UTS2O95399 124 aa2.62□□□□□ -1.99
CLK1-208ENST00000464454 AIFM1O95831 613 aa2.62□□□□□ -1.99
CLK1-208ENST00000464454 TSPAN13O95857 204 aa2.62□□□□□ -1.99
CLK1-208ENST00000464454 FOLR1P15328 257 aa2.62□□□□□ -1.99
CLK1-208ENST00000464454 ZNF250P15622 560 aa2.62□□□□□ -1.99
CLK1-208ENST00000464454 HRH1P35367 487 aa2.62□□□□□ -1.99
CLK1-208ENST00000464454 UBE2AP49459 152 aa2.62□□□□□ -1.99
CLK1-208ENST00000464454 MNAT1P51948 309 aa2.62□□□□□ -1.99
CLK1-208ENST00000464454 NCBP2P52298 156 aaKnown RBP eCLIP2.62□□□□□ -1.99
CLK1-208ENST00000464454 ZNF136P52737 540 aa2.62□□□□□ -1.99
CLK1-208ENST00000464454 C21orf59P57076 290 aa2.62□□□□□ -1.99
CLK1-208ENST00000464454 RGS8P57771 180 aaPredicted RBP2.62□□□□□ -1.99
CLK1-208ENST00000464454 SLC7A9P82251 487 aa2.62□□□□□ -1.99
CLK1-208ENST00000464454 PAX5Q02548 391 aa2.62□□□□□ -1.99
CLK1-208ENST00000464454 TGM3Q08188 693 aa2.62□□□□□ -1.99
CLK1-208ENST00000464454 TCP10Q12799 353 aa2.62□□□□□ -1.99
CLK1-208ENST00000464454 PON3Q15166 354 aa2.62□□□□□ -1.99
CLK1-208ENST00000464454 AGBL2Q5U5Z8 902 aa2.62□□□□□ -1.99
CLK1-208ENST00000464454 Q6P435 159 aa2.62□□□□□ -1.99
CLK1-208ENST00000464454 CENPQQ7L2Z9 268 aaPredicted RBP2.62□□□□□ -1.99
CLK1-208ENST00000464454 OAFQ86UD1 273 aa2.62□□□□□ -1.99
CLK1-208ENST00000464454 FAM81AQ8TBF8 368 aa2.62□□□□□ -1.99
CLK1-208ENST00000464454 ZNF502Q8TBZ5 544 aa2.62□□□□□ -1.99
CLK1-208ENST00000464454 SLC7A13Q8TCU3 470 aa2.62□□□□□ -1.99
CLK1-208ENST00000464454 MCUR1Q96AQ8 359 aa2.62□□□□□ -1.99
CLK1-208ENST00000464454 FAM3DQ96BQ1 224 aa2.62□□□□□ -1.99
CLK1-208ENST00000464454 CEP170P1Q96L14 293 aa2.62□□□□□ -1.99
CLK1-208ENST00000464454 SERPINB12Q96P63 405 aa2.62□□□□□ -1.99
CLK1-208ENST00000464454 TGS1Q96RS0 853 aaKnown RBP2.62□□□□□ -1.99
CLK1-208ENST00000464454 SLC29A1Q99808 456 aa2.62□□□□□ -1.99
CLK1-208ENST00000464454 C20orf24Q9BUV8 137 aa2.62□□□□□ -1.99
CLK1-208ENST00000464454 OR51M1Q9H341 326 aa2.62□□□□□ -1.99
CLK1-208ENST00000464454 ANKRA2Q9H9E1 313 aa2.62□□□□□ -1.99
CLK1-208ENST00000464454 VPS37BQ9H9H4 285 aa2.62□□□□□ -1.99
CLK1-208ENST00000464454 PIKFYVEQ9Y2I7 2098 aa2.62□□□□□ -1.99
CLK1-208ENST00000464454 NINLQ9Y2I6 1382 aa2.61□□□□□ -1.99
CLK1-208ENST00000464454 TET2Q6N021 2002 aaPredicted RBP2.61□□□□□ -1.99
CLK1-208ENST00000464454 IGLV4-69A0A075B6H9 119 aa2.61□□□□□ -1.99
CLK1-208ENST00000464454 IGLV3-16A0A075B6K0 115 aa2.61□□□□□ -1.99
CLK1-208ENST00000464454 A0A096LNJ9 63 aa2.61□□□□□ -1.99
CLK1-208ENST00000464454 GLYATL1P3A0A0U1RQE8 302 aa2.61□□□□□ -1.99
CLK1-208ENST00000464454 ZNF816-ZNF321PA0A0X1KG74 233 aa2.61□□□□□ -1.99
CLK1-208ENST00000464454 SMCO2A6NFE2 343 aa2.61□□□□□ -1.99
CLK1-208ENST00000464454 C11orf94C9JXX5 98 aa2.61□□□□□ -1.99
CLK1-208ENST00000464454 CD5LO43866 347 aa2.61□□□□□ -1.99
CLK1-208ENST00000464454 CLPXO76031 633 aa2.61□□□□□ -1.99
CLK1-208ENST00000464454 RAB3DO95716 219 aa2.61□□□□□ -1.99
CLK1-208ENST00000464454 ZNF32P17041 273 aa2.61□□□□□ -1.99
CLK1-208ENST00000464454 EIF2S2P20042 333 aaKnown RBP2.61□□□□□ -1.99
CLK1-208ENST00000464454 AQP2P41181 271 aa2.61□□□□□ -1.99
CLK1-208ENST00000464454 SLC1A1P43005 524 aa2.61□□□□□ -1.99
CLK1-208ENST00000464454 SYKP43405 635 aa2.61□□□□□ -1.99
CLK1-208ENST00000464454 CYB561P49447 251 aa2.61□□□□□ -1.99
CLK1-208ENST00000464454 PRRX1P54821 245 aa2.61□□□□□ -1.99
CLK1-208ENST00000464454 CCNA1P78396 465 aa2.61□□□□□ -1.99
CLK1-208ENST00000464454 SPANXN2Q5MJ10 180 aa2.61□□□□□ -1.99
CLK1-208ENST00000464454 ANKRD22Q5VYY1 191 aa2.61□□□□□ -1.99
CLK1-208ENST00000464454 C22orf42Q6IC83 251 aa2.61□□□□□ -1.99
CLK1-208ENST00000464454 TEX43Q6ZNM6 134 aa2.61□□□□□ -1.99
CLK1-208ENST00000464454 HDDC2Q7Z4H3 204 aa2.61□□□□□ -1.99
CLK1-208ENST00000464454 Q8N976 141 aa2.61□□□□□ -1.99
CLK1-208ENST00000464454 OR4A4PQ8NGN8 299 aa2.61□□□□□ -1.99
CLK1-208ENST00000464454 OR4S2Q8NH73 311 aa2.61□□□□□ -1.99
CLK1-208ENST00000464454 ZNF596Q8TC21 504 aa2.61□□□□□ -1.99
CLK1-208ENST00000464454 FAM104AQ969W3 186 aa2.61□□□□□ -1.99
CLK1-208ENST00000464454 SLC17A9Q9BYT1 436 aa2.61□□□□□ -1.99
CLK1-208ENST00000464454 TPK1Q9H3S4 243 aa2.61□□□□□ -1.99
CLK1-208ENST00000464454 TMEM185BQ9H7F4 350 aa2.61□□□□□ -1.99
CLK1-208ENST00000464454 ZNF629Q9UEG4 869 aaPredicted RBP2.61□□□□□ -1.99
CLK1-208ENST00000464454 OR2AG2A6NM03 316 aa2.6□□□□□ -1.99
CLK1-208ENST00000464454 H0YHG0 523 aa2.6□□□□□ -1.99
CLK1-208ENST00000464454 SIRPB1O00241 398 aa2.6□□□□□ -1.99
CLK1-208ENST00000464454 NDUFAB1O14561 156 aa2.6□□□□□ -1.99
CLK1-208ENST00000464454 CDH16O75309 829 aa2.6□□□□□ -1.99
CLK1-208ENST00000464454 H6PDO95479 791 aa2.6□□□□□ -1.99
CLK1-208ENST00000464454 SERPINA5P05154 406 aa2.6□□□□□ -1.99
CLK1-208ENST00000464454 GNAO1P09471 354 aa2.6□□□□□ -1.99
CLK1-208ENST00000464454 CDKN2BP42772 138 aa2.6□□□□□ -1.99
CLK1-208ENST00000464454 CX3CR1P49238 355 aa2.6□□□□□ -1.99
CLK1-208ENST00000464454 RAB10P61026 200 aa2.6□□□□□ -1.99
CLK1-208ENST00000464454 MRPL23Q16540 153 aaKnown RBP2.6□□□□□ -1.99
CLK1-208ENST00000464454 POU2AF1Q16633 256 aa2.6□□□□□ -1.99
CLK1-208ENST00000464454 PPM1LQ5SGD2 360 aa2.6□□□□□ -1.99
CLK1-208ENST00000464454 LY6G6FQ5SQ64 297 aa2.6□□□□□ -1.99
CLK1-208ENST00000464454 HES5Q5TA89 166 aa2.6□□□□□ -1.99
CLK1-208ENST00000464454 REEP3Q6NUK4 255 aa2.6□□□□□ -1.99
CLK1-208ENST00000464454 SLC16A14Q7RTX9 510 aa2.6□□□□□ -1.99
CLK1-208ENST00000464454 IQCKQ8N0W5 287 aa2.6□□□□□ -1.99
CLK1-208ENST00000464454 STPG2Q8N412 459 aa2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms