RNA–Protein interactions for RNA: ENST00000463753.5

COL8A1-205, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL8A1, Length 2,964 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-205ENST00000463753 SLC25A43Q8WUT9 341 aaPredicted RBP3.28□□□□□ -1.88
COL8A1-205ENST00000463753 CHTF18Q8WVB6 975 aa3.28□□□□□ -1.88
COL8A1-205ENST00000463753 AUTS2Q8WXX7 1259 aa3.28□□□□□ -1.88
COL8A1-205ENST00000463753 PPCDCQ96CD2 204 aa3.28□□□□□ -1.88
COL8A1-205ENST00000463753 GALNT14Q96FL9 552 aa3.28□□□□□ -1.88
COL8A1-205ENST00000463753 ADGRG7Q96K78 797 aa3.28□□□□□ -1.88
COL8A1-205ENST00000463753 INTS14Q96SY0 518 aa3.28□□□□□ -1.88
COL8A1-205ENST00000463753 TBX5Q99593 518 aa3.28□□□□□ -1.88
COL8A1-205ENST00000463753 TBL1YQ9BQ87 522 aa3.28□□□□□ -1.88
COL8A1-205ENST00000463753 OR2J1Q9GZK6 312 aa3.28□□□□□ -1.88
COL8A1-205ENST00000463753 HIPK2Q9H2X6 1198 aa3.28□□□□□ -1.88
COL8A1-205ENST00000463753 FTSJ1Q9UET6 329 aa3.28□□□□□ -1.88
COL8A1-205ENST00000463753 TCFL5Q9UL49 500 aa3.28□□□□□ -1.88
COL8A1-205ENST00000463753 ZFP30Q9Y2G7 519 aa3.28□□□□□ -1.88
COL8A1-205ENST00000463753 AMDHD2Q9Y303 409 aa3.28□□□□□ -1.88
COL8A1-205ENST00000463753 EXOSC1Q9Y3B2 195 aaKnown RBP3.28□□□□□ -1.88
COL8A1-205ENST00000463753 ENPP4Q9Y6X5 453 aa3.28□□□□□ -1.88
COL8A1-205ENST00000463753 ZFHX2Q9C0A1 2572 aaPredicted RBP3.27□□□□□ -1.89
COL8A1-205ENST00000463753 MEIS3P1A6NDR6 274 aa3.27□□□□□ -1.89
COL8A1-205ENST00000463753 MGAT4DA6NG13 374 aa3.27□□□□□ -1.89
COL8A1-205ENST00000463753 UNC119BA6NIH7 251 aa3.27□□□□□ -1.89
COL8A1-205ENST00000463753 ZNF724A8MTY0 619 aa3.27□□□□□ -1.89
COL8A1-205ENST00000463753 ZNF705FA8MVS1 300 aaPredicted RBP3.27□□□□□ -1.89
COL8A1-205ENST00000463753 HEPACAM2A8MVW5 462 aa3.27□□□□□ -1.89
COL8A1-205ENST00000463753 SNRPGP15A8MWD9 76 aa3.27□□□□□ -1.89
COL8A1-205ENST00000463753 E9PQ18 207 aa3.27□□□□□ -1.89
COL8A1-205ENST00000463753 H7C4K7 107 aa3.27□□□□□ -1.89
COL8A1-205ENST00000463753 MANBAO00462 879 aa3.27□□□□□ -1.89
COL8A1-205ENST00000463753 MFNGO00587 321 aa3.27□□□□□ -1.89
COL8A1-205ENST00000463753 COCHO43405 550 aa3.27□□□□□ -1.89
COL8A1-205ENST00000463753 OR1F1O43749 312 aa3.27□□□□□ -1.89
COL8A1-205ENST00000463753 CILPO75339 1184 aa3.27□□□□□ -1.89
COL8A1-205ENST00000463753 OR2F2O95006 317 aa3.27□□□□□ -1.89
COL8A1-205ENST00000463753 KCNK5O95279 499 aa3.27□□□□□ -1.89
COL8A1-205ENST00000463753 GALTP07902 379 aa3.27□□□□□ -1.89
COL8A1-205ENST00000463753 CXCL1P09341 107 aa3.27□□□□□ -1.89
COL8A1-205ENST00000463753 ZNF705DP0CH99 300 aaPredicted RBP3.27□□□□□ -1.89
COL8A1-205ENST00000463753 ZNF705BP0CI00 300 aaPredicted RBP3.27□□□□□ -1.89
COL8A1-205ENST00000463753 STAG3L3P0CL85 134 aa3.27□□□□□ -1.89
COL8A1-205ENST00000463753 GIMD1P0DJR0 217 aa3.27□□□□□ -1.89
COL8A1-205ENST00000463753 OR12D1P0DN82 309 aa3.27□□□□□ -1.89
COL8A1-205ENST00000463753 TXNP10599 105 aaKnown RBP3.27□□□□□ -1.89
COL8A1-205ENST00000463753 PGAM2P15259 253 aa3.27□□□□□ -1.89
COL8A1-205ENST00000463753 DPP4P27487 766 aa3.27□□□□□ -1.89
COL8A1-205ENST00000463753 TSFMP43897 325 aaKnown RBP3.27□□□□□ -1.89
COL8A1-205ENST00000463753 RABIFP47224 123 aa3.27□□□□□ -1.89
COL8A1-205ENST00000463753 CAPZBP47756 277 aa3.27□□□□□ -1.89
COL8A1-205ENST00000463753 PRKAG1P54619 331 aa3.27□□□□□ -1.89
COL8A1-205ENST00000463753 ATP1B3P54709 279 aa3.27□□□□□ -1.89
COL8A1-205ENST00000463753 UCNP55089 124 aa3.27□□□□□ -1.89
COL8A1-205ENST00000463753 KLF3P57682 345 aaPredicted RBP3.27□□□□□ -1.89
COL8A1-205ENST00000463753 S100A10P60903 97 aa3.27□□□□□ -1.89
COL8A1-205ENST00000463753 RPS23P62266 143 aaKnown RBP3.27□□□□□ -1.89
COL8A1-205ENST00000463753 SELENOTP62341 195 aa3.27□□□□□ -1.89
COL8A1-205ENST00000463753 OR2F1Q13607 317 aa3.27□□□□□ -1.89
COL8A1-205ENST00000463753 KIAA0040Q15053 153 aa3.27□□□□□ -1.89
COL8A1-205ENST00000463753 RHEBQ15382 184 aa3.27□□□□□ -1.89
COL8A1-205ENST00000463753 SLC22A6Q4U2R8 563 aa3.27□□□□□ -1.89
COL8A1-205ENST00000463753 ATXN7L2Q5T6C5 722 aaPredicted RBP3.27□□□□□ -1.89
COL8A1-205ENST00000463753 KCTD11Q693B1 232 aa3.27□□□□□ -1.89
COL8A1-205ENST00000463753 NIPAL3Q6P499 406 aa3.27□□□□□ -1.89
COL8A1-205ENST00000463753 ARL9Q6T311 187 aa3.27□□□□□ -1.89
COL8A1-205ENST00000463753 ALKAL1Q6UXT8 129 aa3.27□□□□□ -1.89
COL8A1-205ENST00000463753 ERASQ7Z444 233 aa3.27□□□□□ -1.89
COL8A1-205ENST00000463753 SERPINA11Q86U17 422 aa3.27□□□□□ -1.89
COL8A1-205ENST00000463753 MEX3DQ86XN8 651 aaKnown RBP3.27□□□□□ -1.89
COL8A1-205ENST00000463753 ANGPTL5Q86XS5 388 aa3.27□□□□□ -1.89
COL8A1-205ENST00000463753 GABRG1Q8N1C3 465 aa3.27□□□□□ -1.89
COL8A1-205ENST00000463753 ARL14EPQ8N8R7 260 aaPredicted RBP3.27□□□□□ -1.89
COL8A1-205ENST00000463753 ST6GALNAC3Q8NDV1 305 aa3.27□□□□□ -1.89
COL8A1-205ENST00000463753 STEAP2Q8NFT2 490 aa3.27□□□□□ -1.89
COL8A1-205ENST00000463753 OR13C4Q8NGS5 318 aa3.27□□□□□ -1.89
COL8A1-205ENST00000463753 OR5K2Q8NHB8 316 aa3.27□□□□□ -1.89
COL8A1-205ENST00000463753 ARRDC2Q8TBH0 407 aa3.27□□□□□ -1.89
COL8A1-205ENST00000463753 ABHD3Q8WU67 409 aa3.27□□□□□ -1.89
COL8A1-205ENST00000463753 SPRYD4Q8WW59 207 aaPredicted RBP3.27□□□□□ -1.89
COL8A1-205ENST00000463753 KCTD13Q8WZ19 329 aa3.27□□□□□ -1.89
COL8A1-205ENST00000463753 MALSU1Q96EH3 234 aa3.27□□□□□ -1.89
COL8A1-205ENST00000463753 IMP4Q96G21 291 aaKnown RBP3.27□□□□□ -1.89
COL8A1-205ENST00000463753 APIPQ96GX9 242 aa3.27□□□□□ -1.89
COL8A1-205ENST00000463753 MRGPRX1Q96LB2 322 aa3.27□□□□□ -1.89
COL8A1-205ENST00000463753 WFIKKN1Q96NZ8 548 aa3.27□□□□□ -1.89
COL8A1-205ENST00000463753 OR8B4Q96RC9 309 aa3.27□□□□□ -1.89
COL8A1-205ENST00000463753 GPR87Q9BY21 358 aa3.27□□□□□ -1.89
COL8A1-205ENST00000463753 HAPLN2Q9GZV7 340 aa3.27□□□□□ -1.89
COL8A1-205ENST00000463753 SPATC1LQ9H0A9 340 aa3.27□□□□□ -1.89
COL8A1-205ENST00000463753 ARV1Q9H2C2 271 aa3.27□□□□□ -1.89
COL8A1-205ENST00000463753 EXO5Q9H790 373 aa3.27□□□□□ -1.89
COL8A1-205ENST00000463753 MARCH4Q9P2E8 410 aaPredicted RBP3.27□□□□□ -1.89
COL8A1-205ENST00000463753 TSPAN16Q9UKR8 245 aa3.27□□□□□ -1.89
COL8A1-205ENST00000463753 RNF150Q9ULK6 438 aa3.27□□□□□ -1.89
COL8A1-205ENST00000463753 SLC7A11Q9UPY5 501 aa3.27□□□□□ -1.89
COL8A1-205ENST00000463753 TIMM10BQ9Y5J6 103 aa3.27□□□□□ -1.89
COL8A1-205ENST00000463753 WIF1Q9Y5W5 379 aa3.27□□□□□ -1.89
COL8A1-205ENST00000463753 KIAA1217Q5T5P2 1943 aa3.27□□□□□ -1.89
COL8A1-205ENST00000463753 A0A087WV62 115 aa3.27□□□□□ -1.89
COL8A1-205ENST00000463753 RNF222A6NCQ9 220 aa3.27□□□□□ -1.89
COL8A1-205ENST00000463753 IQCF5A8MTL0 148 aa3.27□□□□□ -1.89
COL8A1-205ENST00000463753 IFNL4K9M1U5 179 aa3.27□□□□□ -1.89
COL8A1-205ENST00000463753 BHLHE40O14503 412 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms