RNA–Protein interactions for RNA: ENST00000462146.6

PDZRN3-203, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-203ENST00000462146 WNT2BQ93097 391 aa10.61□□□□□ -0.71
PDZRN3-203ENST00000462146 RBM18Q96H35 190 aaKnown RBP10.61□□□□□ -0.71
PDZRN3-203ENST00000462146 BMFQ96LC9 184 aa10.61□□□□□ -0.71
PDZRN3-203ENST00000462146 CRISPLD2Q9H0B8 497 aa10.61□□□□□ -0.71
PDZRN3-203ENST00000462146 SLC25A32Q9H2D1 315 aa10.61□□□□□ -0.71
PDZRN3-203ENST00000462146 TCEAL2Q9H3H9 227 aaPredicted RBP10.61□□□□□ -0.71
PDZRN3-203ENST00000462146 C1orf198Q9H425 327 aa10.61□□□□□ -0.71
PDZRN3-203ENST00000462146 SAV1Q9H4B6 383 aaPredicted RBP10.61□□□□□ -0.71
PDZRN3-203ENST00000462146 PLCL2Q9UPR0 1127 aa10.61□□□□□ -0.71
PDZRN3-203ENST00000462146 FARSAQ9Y285 508 aaKnown RBP10.61□□□□□ -0.71
PDZRN3-203ENST00000462146 TMEM212A6NML5 194 aa10.6□□□□□ -0.71
PDZRN3-203ENST00000462146 K7EQS6 105 aa10.6□□□□□ -0.71
PDZRN3-203ENST00000462146 TMEM127O75204 238 aa10.6□□□□□ -0.71
PDZRN3-203ENST00000462146 RAB3DO95716 219 aa10.6□□□□□ -0.71
PDZRN3-203ENST00000462146 PLGP00747 810 aaPredicted RBP10.6□□□□□ -0.71
PDZRN3-203ENST00000462146 AMY2AP04746 511 aa10.6□□□□□ -0.71
PDZRN3-203ENST00000462146 ASAH2BP0C7U1 165 aa10.6□□□□□ -0.71
PDZRN3-203ENST00000462146 MGMTP16455 207 aa10.6□□□□□ -0.71
PDZRN3-203ENST00000462146 ZNF28P17035 718 aa10.6□□□□□ -0.71
PDZRN3-203ENST00000462146 SQSTM1Q13501 440 aa10.6□□□□□ -0.71
PDZRN3-203ENST00000462146 NFATC4Q14934 902 aa10.6□□□□□ -0.71
PDZRN3-203ENST00000462146 SCGB2B2Q4G0G5 96 aa10.6□□□□□ -0.71
PDZRN3-203ENST00000462146 TMEM196Q5HYL7 178 aa10.6□□□□□ -0.71
PDZRN3-203ENST00000462146 ATPAF1Q5TC12 328 aaPredicted RBP10.6□□□□□ -0.71
PDZRN3-203ENST00000462146 CLRN3Q8NCR9 226 aa10.6□□□□□ -0.71
PDZRN3-203ENST00000462146 SEH1LQ96EE3 360 aa10.6□□□□□ -0.71
PDZRN3-203ENST00000462146 DCBLD2Q96PD2 775 aa10.6□□□□□ -0.71
PDZRN3-203ENST00000462146 ADAT1Q9BUB4 502 aaKnown RBP10.6□□□□□ -0.71
PDZRN3-203ENST00000462146 RPP25Q9BUL9 199 aaKnown RBP10.6□□□□□ -0.71
PDZRN3-203ENST00000462146 ELOVL3Q9HB03 270 aa10.6□□□□□ -0.71
PDZRN3-203ENST00000462146 PCDHB16Q9NRJ7 776 aa10.6□□□□□ -0.71
PDZRN3-203ENST00000462146 PCOLCE2Q9UKZ9 415 aa10.6□□□□□ -0.71
PDZRN3-203ENST00000462146 OR5H14A6NHG9 310 aa10.6□□□□□ -0.71
PDZRN3-203ENST00000462146 C11orf98E9PRG8 122 aa10.6□□□□□ -0.71
PDZRN3-203ENST00000462146 CDC40O60508 579 aaKnown RBP eCLIP10.6□□□□□ -0.71
PDZRN3-203ENST00000462146 SRPX2O60687 465 aaPredicted RBP10.6□□□□□ -0.71
PDZRN3-203ENST00000462146 UBBP0CG47 229 aa10.6□□□□□ -0.71
PDZRN3-203ENST00000462146 UBCP0CG48 685 aaKnown RBP10.6□□□□□ -0.71
PDZRN3-203ENST00000462146 ST6GAL1P15907 406 aa10.6□□□□□ -0.71
PDZRN3-203ENST00000462146 CENPAP49450 140 aa10.6□□□□□ -0.71
PDZRN3-203ENST00000462146 RPS27AP62979 156 aaKnown RBP10.6□□□□□ -0.71
PDZRN3-203ENST00000462146 UBA52P62987 128 aaKnown RBP10.6□□□□□ -0.71
PDZRN3-203ENST00000462146 MFGE8Q08431 387 aaPredicted RBP10.6□□□□□ -0.71
PDZRN3-203ENST00000462146 MEP1BQ16820 701 aa10.6□□□□□ -0.71
PDZRN3-203ENST00000462146 ZNF542PQ5EBM4 170 aa10.6□□□□□ -0.71
PDZRN3-203ENST00000462146 OR4S1Q8NGB4 309 aa10.6□□□□□ -0.71
PDZRN3-203ENST00000462146 OR1J4Q8NGS1 313 aa10.6□□□□□ -0.71
PDZRN3-203ENST00000462146 PHOSPHO1Q8TCT1 267 aa10.6□□□□□ -0.71
PDZRN3-203ENST00000462146 WDR92Q96MX6 357 aa10.6□□□□□ -0.71
PDZRN3-203ENST00000462146 INTS14Q96SY0 518 aa10.6□□□□□ -0.71
PDZRN3-203ENST00000462146 PELOQ9BRX2 385 aaKnown RBP10.6□□□□□ -0.71
PDZRN3-203ENST00000462146 TWSG1Q9GZX9 223 aa10.6□□□□□ -0.71
PDZRN3-203ENST00000462146 LHX6Q9UPM6 363 aa10.6□□□□□ -0.71
PDZRN3-203ENST00000462146 LOC100289279A0A1B0GTE1 492 aa10.59□□□□□ -0.71
PDZRN3-203ENST00000462146 SNAPC5O75971 98 aa10.59□□□□□ -0.71
PDZRN3-203ENST00000462146 HLA-DQA2P01906 255 aa10.59□□□□□ -0.71
PDZRN3-203ENST00000462146 GDI1P31150 447 aa10.59□□□□□ -0.71
PDZRN3-203ENST00000462146 KIR2DL1P43626 348 aaPredicted RBP10.59□□□□□ -0.71
PDZRN3-203ENST00000462146 RIPPLY1Q0D2K3 151 aa10.59□□□□□ -0.71
PDZRN3-203ENST00000462146 DHRS2Q13268 280 aa10.59□□□□□ -0.71
PDZRN3-203ENST00000462146 TAF13Q15543 124 aa10.59□□□□□ -0.71
PDZRN3-203ENST00000462146 NKPD1Q17RQ9 610 aa10.59□□□□□ -0.71
PDZRN3-203ENST00000462146 C1QL3Q5VWW1 255 aa10.59□□□□□ -0.71
PDZRN3-203ENST00000462146 OR2W3Q7Z3T1 314 aa10.59□□□□□ -0.71
PDZRN3-203ENST00000462146 MCATQ8IVS2 390 aaKnown RBP10.59□□□□□ -0.71
PDZRN3-203ENST00000462146 LINC00518Q8N0U6 118 aa10.59□□□□□ -0.71
PDZRN3-203ENST00000462146 TMEM185AQ8NFB2 350 aa10.59□□□□□ -0.71
PDZRN3-203ENST00000462146 OR51A2Q8NGJ7 313 aa10.59□□□□□ -0.71
PDZRN3-203ENST00000462146 RSC1A1Q92681 617 aa10.59□□□□□ -0.71
PDZRN3-203ENST00000462146 VRK1Q99986 396 aaPredicted RBP10.59□□□□□ -0.71
PDZRN3-203ENST00000462146 ZNF471Q9BX82 626 aaPredicted RBP10.59□□□□□ -0.71
PDZRN3-203ENST00000462146 NKX6-2Q9C056 277 aaPredicted RBP10.59□□□□□ -0.71
PDZRN3-203ENST00000462146 CLDN16Q9Y5I7 305 aa10.59□□□□□ -0.71
PDZRN3-203ENST00000462146 A0A0J9YY10 115 aa10.59□□□□□ -0.71
PDZRN3-203ENST00000462146 RNF222A6NCQ9 220 aa10.59□□□□□ -0.71
PDZRN3-203ENST00000462146 C2orf74A8MZ97 194 aa10.59□□□□□ -0.71
PDZRN3-203ENST00000462146 GPR31O00270 319 aa10.59□□□□□ -0.71
PDZRN3-203ENST00000462146 SLC17A2O00624 439 aa10.59□□□□□ -0.71
PDZRN3-203ENST00000462146 PMS2P2O95744 297 aa10.59□□□□□ -0.71
PDZRN3-203ENST00000462146 ZNF735P0CB33 412 aa10.59□□□□□ -0.71
PDZRN3-203ENST00000462146 STARP49675 285 aa10.59□□□□□ -0.71
PDZRN3-203ENST00000462146 ATP1B3P54709 279 aa10.59□□□□□ -0.71
PDZRN3-203ENST00000462146 ALG11Q2TAA5 492 aa10.59□□□□□ -0.71
PDZRN3-203ENST00000462146 TMEM88Q6PEY1 159 aa10.59□□□□□ -0.71
PDZRN3-203ENST00000462146 MOB3CQ70IA8 216 aa10.59□□□□□ -0.71
PDZRN3-203ENST00000462146 ZNF321PQ8N8H1 164 aa10.59□□□□□ -0.71
PDZRN3-203ENST00000462146 AVL9Q8NBF6 648 aa10.59□□□□□ -0.71
PDZRN3-203ENST00000462146 TAAR8Q969N4 342 aa10.59□□□□□ -0.71
PDZRN3-203ENST00000462146 G6PC3Q9BUM1 346 aa10.59□□□□□ -0.71
PDZRN3-203ENST00000462146 RTN4RQ9BZR6 473 aa10.59□□□□□ -0.71
PDZRN3-203ENST00000462146 OR10A5Q9H207 317 aa10.59□□□□□ -0.71
PDZRN3-203ENST00000462146 SFXN1Q9H9B4 322 aa10.59□□□□□ -0.71
PDZRN3-203ENST00000462146 HPF1Q9NWY4 346 aa10.59□□□□□ -0.71
PDZRN3-203ENST00000462146 TAS2R4Q9NYW5 299 aa10.59□□□□□ -0.71
PDZRN3-203ENST00000462146 KLK13Q9UKR3 277 aa10.59□□□□□ -0.71
PDZRN3-203ENST00000462146 NOP16Q9Y3C1 178 aaKnown RBP10.59□□□□□ -0.71
PDZRN3-203ENST00000462146 MRPS18BQ9Y676 258 aaKnown RBP10.59□□□□□ -0.71
PDZRN3-203ENST00000462146 TMEM131Q92545 1883 aa10.59□□□□□ -0.71
PDZRN3-203ENST00000462146 GON4LQ3T8J9 2241 aa10.59□□□□□ -0.71
PDZRN3-203ENST00000462146 FITM1A5D6W6 292 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms