RNA–Protein interactions for RNA: ENST00000462125.5

C9orf3-210, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 961 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-210ENST00000462125 NEU4Q8WWR8 484 aaPredicted RBP11.39□□□□□ -0.59
C9orf3-210ENST00000462125 HDAC2Q92769 488 aaKnown RBP11.39□□□□□ -0.59
C9orf3-210ENST00000462125 MRPL24Q96A35 216 aaKnown RBP11.39□□□□□ -0.59
C9orf3-210ENST00000462125 ASB9Q96DX5 294 aa11.39□□□□□ -0.59
C9orf3-210ENST00000462125 CLPTM1LQ96KA5 538 aa11.39□□□□□ -0.59
C9orf3-210ENST00000462125 FOXN4Q96NZ1 517 aa11.39□□□□□ -0.59
C9orf3-210ENST00000462125 KCNK17Q96T54 332 aa11.39□□□□□ -0.59
C9orf3-210ENST00000462125 ANKRD19PQ9H560 264 aa11.39□□□□□ -0.59
C9orf3-210ENST00000462125 SIAEQ9HAT2 523 aa11.39□□□□□ -0.59
C9orf3-210ENST00000462125 S100A14Q9HCY8 104 aa11.39□□□□□ -0.59
C9orf3-210ENST00000462125 ADA2Q9NZK5 511 aa11.39□□□□□ -0.59
C9orf3-210ENST00000462125 RHCGQ9UBD6 479 aa11.39□□□□□ -0.59
C9orf3-210ENST00000462125 ZNF346Q9UL40 294 aaKnown RBP11.39□□□□□ -0.59
C9orf3-210ENST00000462125 ABCA2Q9BZC7 2435 aa11.39□□□□□ -0.59
C9orf3-210ENST00000462125 MCIDASD6RGH6 385 aa11.38□□□□□ -0.59
C9orf3-210ENST00000462125 KRT36O76013 467 aa11.38□□□□□ -0.59
C9orf3-210ENST00000462125 PTHP01270 115 aa11.38□□□□□ -0.59
C9orf3-210ENST00000462125 MMP7P09237 267 aaPredicted RBP11.38□□□□□ -0.59
C9orf3-210ENST00000462125 NR4A2P43354 598 aa11.38□□□□□ -0.59
C9orf3-210ENST00000462125 SLC9A3P48764 834 aa11.38□□□□□ -0.59
C9orf3-210ENST00000462125 RPL27P61353 136 aaKnown RBP11.38□□□□□ -0.59
C9orf3-210ENST00000462125 MRPS34P82930 218 aaKnown RBP11.38□□□□□ -0.59
C9orf3-210ENST00000462125 MYBPC1Q00872 1141 aa11.38□□□□□ -0.59
C9orf3-210ENST00000462125 FLOT2Q14254 428 aa11.38□□□□□ -0.59
C9orf3-210ENST00000462125 SLC36A2Q495M3 483 aa11.38□□□□□ -0.59
C9orf3-210ENST00000462125 SLC25A47Q6Q0C1 308 aa11.38□□□□□ -0.59
C9orf3-210ENST00000462125 MBOAT2Q6ZWT7 520 aa11.38□□□□□ -0.59
C9orf3-210ENST00000462125 SLC16A14Q7RTX9 510 aa11.38□□□□□ -0.59
C9orf3-210ENST00000462125 HIPK1Q86Z02 1210 aa11.38□□□□□ -0.59
C9orf3-210ENST00000462125 ZCCHC24Q8N2G6 241 aaKnown RBP11.38□□□□□ -0.59
C9orf3-210ENST00000462125 FAM156AQ8NDB6 213 aa11.38□□□□□ -0.59
C9orf3-210ENST00000462125 FNDC8Q8TC99 324 aa11.38□□□□□ -0.59
C9orf3-210ENST00000462125 CCDC124Q96CT7 223 aaKnown RBP11.38□□□□□ -0.59
C9orf3-210ENST00000462125 HSH2DQ96JZ2 352 aa11.38□□□□□ -0.59
C9orf3-210ENST00000462125 KCTD14Q9BQ13 255 aaPredicted RBP11.38□□□□□ -0.59
C9orf3-210ENST00000462125 ALG12Q9BV10 488 aa11.38□□□□□ -0.59
C9orf3-210ENST00000462125 MRPL37Q9BZE1 423 aaKnown RBP11.38□□□□□ -0.59
C9orf3-210ENST00000462125 MS4A5Q9H3V2 200 aa11.38□□□□□ -0.59
C9orf3-210ENST00000462125 C1orf198Q9H425 327 aa11.38□□□□□ -0.59
C9orf3-210ENST00000462125 YAE1D1Q9NRH1 226 aa11.38□□□□□ -0.59
C9orf3-210ENST00000462125 UGT2A1Q9Y4X1 527 aa11.38□□□□□ -0.59
C9orf3-210ENST00000462125 ENPP4Q9Y6X5 453 aa11.38□□□□□ -0.59
C9orf3-210ENST00000462125 IGKV1D-43A0A0B4J1Z2 117 aa11.37□□□□□ -0.59
C9orf3-210ENST00000462125 SLC22A23A1A5C7 686 aa11.37□□□□□ -0.59
C9orf3-210ENST00000462125 SYNGR3O43761 229 aa11.37□□□□□ -0.59
C9orf3-210ENST00000462125 NR2C1P13056 603 aa11.37□□□□□ -0.59
C9orf3-210ENST00000462125 HSD17B1P14061 328 aa11.37□□□□□ -0.59
C9orf3-210ENST00000462125 NCK1P16333 377 aa11.37□□□□□ -0.59
C9orf3-210ENST00000462125 GIFP27352 417 aa11.37□□□□□ -0.59
C9orf3-210ENST00000462125 CTXN1P60606 82 aa11.37□□□□□ -0.59
C9orf3-210ENST00000462125 GALK2Q01415 458 aa11.37□□□□□ -0.59
C9orf3-210ENST00000462125 TRIM25Q14258 630 aaKnown RBP11.37□□□□□ -0.59
C9orf3-210ENST00000462125 THEM4Q5T1C6 240 aa11.37□□□□□ -0.59
C9orf3-210ENST00000462125 FAM27BQ5VT28 67 aa11.37□□□□□ -0.59
C9orf3-210ENST00000462125 GLYATQ6IB77 296 aa11.37□□□□□ -0.59
C9orf3-210ENST00000462125 TMEM53Q6P2H8 277 aa11.37□□□□□ -0.59
C9orf3-210ENST00000462125 TBPL2Q6SJ96 375 aa11.37□□□□□ -0.59
C9orf3-210ENST00000462125 OAFQ86UD1 273 aa11.37□□□□□ -0.59
C9orf3-210ENST00000462125 CDK20Q8IZL9 346 aa11.37□□□□□ -0.59
C9orf3-210ENST00000462125 ZNF786Q8N393 782 aa11.37□□□□□ -0.59
C9orf3-210ENST00000462125 ZNF540Q8NDQ6 660 aa11.37□□□□□ -0.59
C9orf3-210ENST00000462125 SLC30A7Q8NEW0 376 aa11.37□□□□□ -0.59
C9orf3-210ENST00000462125 OR51A7Q8NH64 312 aa11.37□□□□□ -0.59
C9orf3-210ENST00000462125 FAM162AQ96A26 154 aa11.37□□□□□ -0.59
C9orf3-210ENST00000462125 NABP1Q96AH0 204 aa11.37□□□□□ -0.59
C9orf3-210ENST00000462125 C7orf34Q96L11 122 aa11.37□□□□□ -0.59
C9orf3-210ENST00000462125 RBP7Q96R05 134 aa11.37□□□□□ -0.59
C9orf3-210ENST00000462125 GORASP2Q9H8Y8 452 aa11.37□□□□□ -0.59
C9orf3-210ENST00000462125 RNF121Q9H920 327 aa11.37□□□□□ -0.59
C9orf3-210ENST00000462125 NMNAT1Q9HAN9 279 aaPredicted RBP11.37□□□□□ -0.59
C9orf3-210ENST00000462125 DCAF13Q9NV06 445 aaKnown RBP11.37□□□□□ -0.59
C9orf3-210ENST00000462125 RPS6KA6Q9UK32 745 aa11.37□□□□□ -0.59
C9orf3-210ENST00000462125 YLPM1P49750 1951 aaKnown RBP11.37□□□□□ -0.59
C9orf3-210ENST00000462125 JMJD1CQ15652 2540 aa11.37□□□□□ -0.59
C9orf3-210ENST00000462125 A0A1W2PRQ8 180 aa11.36□□□□□ -0.59
C9orf3-210ENST00000462125 SH3PXD2BA1X283 911 aa11.36□□□□□ -0.59
C9orf3-210ENST00000462125 A8MV72 311 aaPredicted RBP11.36□□□□□ -0.59
C9orf3-210ENST00000462125 EFCAB9A8MZ26 197 aa11.36□□□□□ -0.59
C9orf3-210ENST00000462125 PTP4A3O75365 173 aa11.36□□□□□ -0.59
C9orf3-210ENST00000462125 SLC2A10O95528 541 aa11.36□□□□□ -0.59
C9orf3-210ENST00000462125 SNAP29O95721 258 aa11.36□□□□□ -0.59
C9orf3-210ENST00000462125 ERCC1P07992 297 aaPredicted RBP11.36□□□□□ -0.59
C9orf3-210ENST00000462125 ADRA2AP08913 450 aa11.36□□□□□ -0.59
C9orf3-210ENST00000462125 SAGP10523 405 aaPredicted RBP11.36□□□□□ -0.59
C9orf3-210ENST00000462125 DAOP14920 347 aa11.36□□□□□ -0.59
C9orf3-210ENST00000462125 ANPEPP15144 967 aa11.36□□□□□ -0.59
C9orf3-210ENST00000462125 RHCEP18577 417 aa11.36□□□□□ -0.59
C9orf3-210ENST00000462125 RPS23P62266 143 aaKnown RBP11.36□□□□□ -0.59
C9orf3-210ENST00000462125 CCNIQ14094 377 aa11.36□□□□□ -0.59
C9orf3-210ENST00000462125 DGCR6Q14129 220 aa11.36□□□□□ -0.59
C9orf3-210ENST00000462125 IQCCQ4KMZ1 466 aa11.36□□□□□ -0.59
C9orf3-210ENST00000462125 C6orf52Q5T4I8 152 aa11.36□□□□□ -0.59
C9orf3-210ENST00000462125 FAM205BPQ63HN1 556 aa11.36□□□□□ -0.59
C9orf3-210ENST00000462125 CYB5R2Q6BCY4 276 aa11.36□□□□□ -0.59
C9orf3-210ENST00000462125 ZNF730Q6ZMV8 503 aa11.36□□□□□ -0.59
C9orf3-210ENST00000462125 FOXL2NBQ6ZUU3 175 aa11.36□□□□□ -0.59
C9orf3-210ENST00000462125 CYP4Z1Q86W10 505 aa11.36□□□□□ -0.59
C9orf3-210ENST00000462125 MEX3DQ86XN8 651 aaKnown RBP11.36□□□□□ -0.59
C9orf3-210ENST00000462125 PAQR4Q8N4S7 273 aaPredicted RBP11.36□□□□□ -0.59
C9orf3-210ENST00000462125 ARIH2OSQ8N7S6 290 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 99.6 ms