RNA–Protein interactions for RNA: ENST00000461897.5

COL4A6-204, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,889 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-204ENST00000461897 UPK3AO75631 287 aa11.23□□□□□ -0.61
COL4A6-204ENST00000461897 TACSTD2P09758 323 aa11.23□□□□□ -0.61
COL4A6-204ENST00000461897 RPL4P36578 427 aaKnown RBP11.23□□□□□ -0.61
COL4A6-204ENST00000461897 P2RX1P51575 399 aa11.23□□□□□ -0.61
COL4A6-204ENST00000461897 CLDN6P56747 220 aa11.23□□□□□ -0.61
COL4A6-204ENST00000461897 PLCXD2Q0VAA5 305 aa11.23□□□□□ -0.61
COL4A6-204ENST00000461897 SKP2Q13309 424 aa11.23□□□□□ -0.61
COL4A6-204ENST00000461897 Q499Y3 187 aa11.23□□□□□ -0.61
COL4A6-204ENST00000461897 HES5Q5TA89 166 aa11.23□□□□□ -0.61
COL4A6-204ENST00000461897 STAC2Q6ZMT1 411 aa11.23□□□□□ -0.61
COL4A6-204ENST00000461897 NUP54Q7Z3B4 507 aa11.23□□□□□ -0.61
COL4A6-204ENST00000461897 SUMF1Q8NBK3 374 aa11.23□□□□□ -0.61
COL4A6-204ENST00000461897 C8orf44Q96CB5 159 aa11.23□□□□□ -0.61
COL4A6-204ENST00000461897 OMA1Q96E52 524 aa11.23□□□□□ -0.61
COL4A6-204ENST00000461897 MNTQ99583 582 aa11.23□□□□□ -0.61
COL4A6-204ENST00000461897 ALG12Q9BV10 488 aa11.23□□□□□ -0.61
COL4A6-204ENST00000461897 RTN4RQ9BZR6 473 aa11.23□□□□□ -0.61
COL4A6-204ENST00000461897 METTL17Q9H7H0 456 aaPredicted RBP11.23□□□□□ -0.61
COL4A6-204ENST00000461897 WDR54Q9H977 334 aa11.23□□□□□ -0.61
COL4A6-204ENST00000461897 LIN7BQ9HAP6 207 aa11.23□□□□□ -0.61
COL4A6-204ENST00000461897 SLC39A1Q9NY26 324 aa11.23□□□□□ -0.61
COL4A6-204ENST00000461897 MRTO4Q9UKD2 239 aaKnown RBP11.23□□□□□ -0.61
COL4A6-204ENST00000461897 MAB21L2Q9Y586 359 aa11.23□□□□□ -0.61
COL4A6-204ENST00000461897 PLSCR5A0PG75 271 aa11.22□□□□□ -0.61
COL4A6-204ENST00000461897 OR2M5A3KFT3 312 aa11.22□□□□□ -0.61
COL4A6-204ENST00000461897 ACOD1A6NK06 481 aa11.22□□□□□ -0.61
COL4A6-204ENST00000461897 HSPB2A8KAH6 182 aa11.22□□□□□ -0.61
COL4A6-204ENST00000461897 B4E171 279 aa11.22□□□□□ -0.61
COL4A6-204ENST00000461897 SCDO00767 359 aa11.22□□□□□ -0.61
COL4A6-204ENST00000461897 ZNF432O94892 652 aa11.22□□□□□ -0.61
COL4A6-204ENST00000461897 NDUFB6O95139 128 aa11.22□□□□□ -0.61
COL4A6-204ENST00000461897 CD14P08571 375 aa11.22□□□□□ -0.61
COL4A6-204ENST00000461897 UBL4AP11441 157 aa11.22□□□□□ -0.61
COL4A6-204ENST00000461897 HPGDP15428 266 aa11.22□□□□□ -0.61
COL4A6-204ENST00000461897 CSRP1P21291 193 aaKnown RBP11.22□□□□□ -0.61
COL4A6-204ENST00000461897 ENPP1P22413 925 aa11.22□□□□□ -0.61
COL4A6-204ENST00000461897 IL12BP29460 328 aa11.22□□□□□ -0.61
COL4A6-204ENST00000461897 TSPAN7P41732 249 aa11.22□□□□□ -0.61
COL4A6-204ENST00000461897 VEGFCP49767 419 aa11.22□□□□□ -0.61
COL4A6-204ENST00000461897 RAP2BP61225 183 aa11.22□□□□□ -0.61
COL4A6-204ENST00000461897 HSPB2Q16082 182 aa11.22□□□□□ -0.61
COL4A6-204ENST00000461897 CCDC157Q569K6 752 aa11.22□□□□□ -0.61
COL4A6-204ENST00000461897 ZNF626Q68DY1 528 aa11.22□□□□□ -0.61
COL4A6-204ENST00000461897 SFRP4Q6FHJ7 346 aaPredicted RBP11.22□□□□□ -0.61
COL4A6-204ENST00000461897 CBLN3Q6UW01 205 aa11.22□□□□□ -0.61
COL4A6-204ENST00000461897 LRRN1Q6UXK5 716 aa11.22□□□□□ -0.61
COL4A6-204ENST00000461897 C16orf47Q6ZP98 133 aaPredicted RBP11.22□□□□□ -0.61
COL4A6-204ENST00000461897 CPEB2Q7Z5Q1 589 aaKnown RBP11.22□□□□□ -0.61
COL4A6-204ENST00000461897 LRRTM1Q86UE6 522 aa11.22□□□□□ -0.61
COL4A6-204ENST00000461897 OR2T4Q8NH00 348 aa11.22□□□□□ -0.61
COL4A6-204ENST00000461897 THEM6Q8WUY1 208 aa11.22□□□□□ -0.61
COL4A6-204ENST00000461897 RASD2Q96D21 266 aa11.22□□□□□ -0.61
COL4A6-204ENST00000461897 CMKLR1Q99788 373 aa11.22□□□□□ -0.61
COL4A6-204ENST00000461897 GSX2Q9BZM3 304 aa11.22□□□□□ -0.61
COL4A6-204ENST00000461897 NARFLQ9H6Q4 476 aa11.22□□□□□ -0.61
COL4A6-204ENST00000461897 KIF25Q9UIL4 384 aa11.22□□□□□ -0.61
COL4A6-204ENST00000461897 FLVCR2Q9UPI3 526 aa11.22□□□□□ -0.61
COL4A6-204ENST00000461897 TRBV5-7A0A0A0MS05 114 aa11.21□□□□□ -0.61
COL4A6-204ENST00000461897 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.21□□□□□ -0.61
COL4A6-204ENST00000461897 PMS2P1A4D2B8 440 aa11.21□□□□□ -0.61
COL4A6-204ENST00000461897 M0R233 179 aa11.21□□□□□ -0.61
COL4A6-204ENST00000461897 ZNF354AO60765 605 aaPredicted RBP11.21□□□□□ -0.61
COL4A6-204ENST00000461897 CYC1P08574 325 aa11.21□□□□□ -0.61
COL4A6-204ENST00000461897 PNMTP11086 282 aa11.21□□□□□ -0.61
COL4A6-204ENST00000461897 ART1P52961 327 aa11.21□□□□□ -0.61
COL4A6-204ENST00000461897 ERVK-25P63136 954 aa11.21□□□□□ -0.61
COL4A6-204ENST00000461897 INSM1Q01101 510 aaPredicted RBP11.21□□□□□ -0.61
COL4A6-204ENST00000461897 BAMBIQ13145 260 aa11.21□□□□□ -0.61
COL4A6-204ENST00000461897 ALKBH1Q13686 389 aaKnown RBP11.21□□□□□ -0.61
COL4A6-204ENST00000461897 MFSD13AQ14CX5 517 aa11.21□□□□□ -0.61
COL4A6-204ENST00000461897 AANATQ16613 207 aa11.21□□□□□ -0.61
COL4A6-204ENST00000461897 EMC4Q5J8M3 183 aa11.21□□□□□ -0.61
COL4A6-204ENST00000461897 TMEM69Q5SWH9 247 aa11.21□□□□□ -0.61
COL4A6-204ENST00000461897 MTFR2Q6P444 385 aa11.21□□□□□ -0.61
COL4A6-204ENST00000461897 COMMD7Q86VX2 200 aa11.21□□□□□ -0.61
COL4A6-204ENST00000461897 CDC20BQ86Y33 519 aa11.21□□□□□ -0.61
COL4A6-204ENST00000461897 ADGRG3Q86Y34 549 aa11.21□□□□□ -0.61
COL4A6-204ENST00000461897 DND1Q8IYX4 353 aaKnown RBP11.21□□□□□ -0.61
COL4A6-204ENST00000461897 FTMTQ8N4E7 242 aa11.21□□□□□ -0.61
COL4A6-204ENST00000461897 OR6K6Q8NGW6 343 aa11.21□□□□□ -0.61
COL4A6-204ENST00000461897 SYNPRQ8TBG9 265 aa11.21□□□□□ -0.61
COL4A6-204ENST00000461897 LRRC20Q8TCA0 184 aa11.21□□□□□ -0.61
COL4A6-204ENST00000461897 PHOSPHO1Q8TCT1 267 aa11.21□□□□□ -0.61
COL4A6-204ENST00000461897 MR1Q95460 341 aa11.21□□□□□ -0.61
COL4A6-204ENST00000461897 ZNF524Q96C55 264 aa11.21□□□□□ -0.61
COL4A6-204ENST00000461897 LPAR4Q99677 370 aa11.21□□□□□ -0.61
COL4A6-204ENST00000461897 KLHDC3Q9BQ90 382 aa11.21□□□□□ -0.61
COL4A6-204ENST00000461897 SLITRK2Q9H156 845 aa11.21□□□□□ -0.61
COL4A6-204ENST00000461897 SLC25A18Q9H1K4 315 aa11.21□□□□□ -0.61
COL4A6-204ENST00000461897 OR10A4Q9H209 315 aa11.21□□□□□ -0.61
COL4A6-204ENST00000461897 NOX3Q9HBY0 568 aa11.21□□□□□ -0.61
COL4A6-204ENST00000461897 EXOSC3Q9NQT5 275 aaKnown RBP11.21□□□□□ -0.61
COL4A6-204ENST00000461897 MED9Q9NWA0 146 aa11.21□□□□□ -0.61
COL4A6-204ENST00000461897 MRM2Q9UI43 246 aaKnown RBP11.21□□□□□ -0.61
COL4A6-204ENST00000461897 NXT1Q9UKK6 140 aaKnown RBP11.21□□□□□ -0.61
COL4A6-204ENST00000461897 LOXL2Q9Y4K0 774 aa11.21□□□□□ -0.61
COL4A6-204ENST00000461897 B3GALT1Q9Y5Z6 326 aa11.21□□□□□ -0.61
COL4A6-204ENST00000461897 TMEM200CA6NKL6 621 aa11.21□□□□□ -0.62
COL4A6-204ENST00000461897 C17orf51A8MQB3 221 aa11.21□□□□□ -0.62
COL4A6-204ENST00000461897 ARPC1BO15143 372 aaKnown RBP11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms