RNA–Protein interactions for RNA: ENST00000459994.2

SDF4-204, Transcript of stromal cell derived factor 4, humanhuman

TSL 5

Gene SDF4, Length 604 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-204ENST00000459994 EFNB1P98172 346 aa13.67□□□□□ -0.22
SDF4-204ENST00000459994 MELKQ14680 651 aa13.67□□□□□ -0.22
SDF4-204ENST00000459994 SLC35F1Q5T1Q4 408 aa13.67□□□□□ -0.22
SDF4-204ENST00000459994 TMEM123Q8N131 208 aa13.67□□□□□ -0.22
SDF4-204ENST00000459994 DEPDC4Q8N2C3 294 aa13.67□□□□□ -0.22
SDF4-204ENST00000459994 TRUB1Q8WWH5 349 aaKnown RBP13.67□□□□□ -0.22
SDF4-204ENST00000459994 CYGBQ8WWM9 190 aa13.67□□□□□ -0.22
SDF4-204ENST00000459994 RASD2Q96D21 266 aa13.67□□□□□ -0.22
SDF4-204ENST00000459994 POM121Q96HA1 1249 aa13.67□□□□□ -0.22
SDF4-204ENST00000459994 LRR1Q96L50 414 aa13.67□□□□□ -0.22
SDF4-204ENST00000459994 OR2M2Q96R28 347 aa13.67□□□□□ -0.22
SDF4-204ENST00000459994 DDOQ99489 341 aa13.67□□□□□ -0.22
SDF4-204ENST00000459994 APOL4Q9BPW4 351 aa13.67□□□□□ -0.22
SDF4-204ENST00000459994 ALG12Q9BV10 488 aa13.67□□□□□ -0.22
SDF4-204ENST00000459994 MRPL13Q9BYD1 178 aaKnown RBP13.67□□□□□ -0.22
SDF4-204ENST00000459994 TVP23BQ9NYZ1 205 aa13.67□□□□□ -0.22
SDF4-204ENST00000459994 RAB26Q9ULW5 256 aa13.67□□□□□ -0.22
SDF4-204ENST00000459994 CR1P17927 2039 aa13.67□□□□□ -0.22
SDF4-204ENST00000459994 OR6C65A6NJZ3 312 aa13.66□□□□□ -0.22
SDF4-204ENST00000459994 RIIAD1A6NNX1 92 aa13.66□□□□□ -0.22
SDF4-204ENST00000459994 XKRYO14609 159 aa13.66□□□□□ -0.22
SDF4-204ENST00000459994 ARHGEF9O43307 516 aa13.66□□□□□ -0.22
SDF4-204ENST00000459994 SMPD2O60906 423 aa13.66□□□□□ -0.22
SDF4-204ENST00000459994 SLC43A1O75387 559 aa13.66□□□□□ -0.22
SDF4-204ENST00000459994 TRMUO75648 421 aaKnown RBP13.66□□□□□ -0.22
SDF4-204ENST00000459994 IGHG1P01857 330 aa13.66□□□□□ -0.22
SDF4-204ENST00000459994 IGHV1-2P23083 117 aa13.66□□□□□ -0.22
SDF4-204ENST00000459994 CDKN2AP42771 156 aaKnown RBP13.66□□□□□ -0.22
SDF4-204ENST00000459994 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.66□□□□□ -0.22
SDF4-204ENST00000459994 SNAPC1Q16533 368 aa13.66□□□□□ -0.22
SDF4-204ENST00000459994 MESTQ5EB52 335 aa13.66□□□□□ -0.22
SDF4-204ENST00000459994 NIPAL3Q6P499 406 aa13.66□□□□□ -0.22
SDF4-204ENST00000459994 USP51Q70EK9 711 aa13.66□□□□□ -0.22
SDF4-204ENST00000459994 JAZF1Q86VZ6 243 aa13.66□□□□□ -0.22
SDF4-204ENST00000459994 WDFY1Q8IWB7 410 aa13.66□□□□□ -0.22
SDF4-204ENST00000459994 NPEPL1Q8NDH3 523 aa13.66□□□□□ -0.22
SDF4-204ENST00000459994 OR52E2Q8NGJ4 325 aa13.66□□□□□ -0.22
SDF4-204ENST00000459994 OR8J1Q8NGP2 316 aa13.66□□□□□ -0.22
SDF4-204ENST00000459994 OR4K13Q8NH42 304 aa13.66□□□□□ -0.22
SDF4-204ENST00000459994 FNDC8Q8TC99 324 aa13.66□□□□□ -0.22
SDF4-204ENST00000459994 HDAC2Q92769 488 aaKnown RBP13.66□□□□□ -0.22
SDF4-204ENST00000459994 ZNF566Q969W8 418 aa13.66□□□□□ -0.22
SDF4-204ENST00000459994 PLEKHA8Q96JA3 519 aa13.66□□□□□ -0.22
SDF4-204ENST00000459994 KCNK17Q96T54 332 aa13.66□□□□□ -0.22
SDF4-204ENST00000459994 EMC6Q9BV81 110 aa13.66□□□□□ -0.22
SDF4-204ENST00000459994 OR10A4Q9H209 315 aa13.66□□□□□ -0.22
SDF4-204ENST00000459994 FN3KQ9H479 309 aa13.66□□□□□ -0.22
SDF4-204ENST00000459994 VSX1Q9NZR4 365 aaPredicted RBP13.66□□□□□ -0.22
SDF4-204ENST00000459994 HSPE1-MOB4S4R3N1 261 aa13.66□□□□□ -0.22
SDF4-204ENST00000459994 HEATR1Q9H583 2144 aaKnown RBP13.66□□□□□ -0.22
SDF4-204ENST00000459994 PRSS37A4D1T9 235 aa13.65□□□□□ -0.22
SDF4-204ENST00000459994 MPZL2O60487 215 aa13.65□□□□□ -0.22
SDF4-204ENST00000459994 PGA4P0DJD7 388 aa13.65□□□□□ -0.22
SDF4-204ENST00000459994 PGA3P0DJD8 388 aa13.65□□□□□ -0.22
SDF4-204ENST00000459994 NR2C1P13056 603 aa13.65□□□□□ -0.22
SDF4-204ENST00000459994 ZNF3P17036 446 aa13.65□□□□□ -0.22
SDF4-204ENST00000459994 SELENOPP49908 381 aa13.65□□□□□ -0.22
SDF4-204ENST00000459994 SNRPGP62308 76 aaKnown RBP13.65□□□□□ -0.22
SDF4-204ENST00000459994 RUNX1T1Q06455 604 aa13.65□□□□□ -0.22
SDF4-204ENST00000459994 CAMK2DQ13557 499 aa13.65□□□□□ -0.22
SDF4-204ENST00000459994 HIST3H3Q16695 136 aa13.65□□□□□ -0.22
SDF4-204ENST00000459994 NCMAPQ5T1S8 102 aa13.65□□□□□ -0.22
SDF4-204ENST00000459994 C6orf52Q5T4I8 152 aa13.65□□□□□ -0.22
SDF4-204ENST00000459994 ZNF691Q5VV52 312 aa13.65□□□□□ -0.22
SDF4-204ENST00000459994 Q6ZT83 130 aa13.65□□□□□ -0.22
SDF4-204ENST00000459994 PTCHD4Q6ZW05 846 aa13.65□□□□□ -0.22
SDF4-204ENST00000459994 BHLHA15Q7RTS1 189 aaPredicted RBP13.65□□□□□ -0.22
SDF4-204ENST00000459994 C20orf196Q8IYI0 205 aa13.65□□□□□ -0.22
SDF4-204ENST00000459994 SLC37A3Q8NCC5 494 aa13.65□□□□□ -0.22
SDF4-204ENST00000459994 SETD9Q8NE22 299 aa13.65□□□□□ -0.22
SDF4-204ENST00000459994 STEAP2Q8NFT2 490 aa13.65□□□□□ -0.22
SDF4-204ENST00000459994 FAM81AQ8TBF8 368 aa13.65□□□□□ -0.22
SDF4-204ENST00000459994 AKAP1Q92667 903 aaKnown RBP eCLIP13.65□□□□□ -0.22
SDF4-204ENST00000459994 KISS1RQ969F8 398 aaPredicted RBP13.65□□□□□ -0.22
SDF4-204ENST00000459994 TMEM54Q969K7 222 aa13.65□□□□□ -0.22
SDF4-204ENST00000459994 NMD3Q96D46 503 aaKnown RBP13.65□□□□□ -0.22
SDF4-204ENST00000459994 Q96MF0 132 aa13.65□□□□□ -0.22
SDF4-204ENST00000459994 LINC00470Q9BZP3 86 aa13.65□□□□□ -0.22
SDF4-204ENST00000459994 IMPAD1Q9NX62 359 aa13.65□□□□□ -0.22
SDF4-204ENST00000459994 NPAP1Q9NZP6 1156 aa13.65□□□□□ -0.22
SDF4-204ENST00000459994 SLC22A23A1A5C7 686 aa13.64□□□□□ -0.23
SDF4-204ENST00000459994 DPRXA6NFQ7 191 aa13.64□□□□□ -0.23
SDF4-204ENST00000459994 TRIM64A6NGJ6 449 aa13.64□□□□□ -0.23
SDF4-204ENST00000459994 TRIM64BA6NI03 449 aa13.64□□□□□ -0.23
SDF4-204ENST00000459994 HS3ST1O14792 307 aa13.64□□□□□ -0.23
SDF4-204ENST00000459994 PRKYO43930 277 aa13.64□□□□□ -0.23
SDF4-204ENST00000459994 SLC2A10O95528 541 aa13.64□□□□□ -0.23
SDF4-204ENST00000459994 RENP00797 406 aa13.64□□□□□ -0.23
SDF4-204ENST00000459994 IL32P24001 234 aa13.64□□□□□ -0.23
SDF4-204ENST00000459994 CSNK1A1P48729 337 aa13.64□□□□□ -0.23
SDF4-204ENST00000459994 PTH2RP49190 550 aa13.64□□□□□ -0.23
SDF4-204ENST00000459994 ZNF133P52736 654 aaPredicted RBP13.64□□□□□ -0.23
SDF4-204ENST00000459994 ITGADQ13349 1161 aa13.64□□□□□ -0.23
SDF4-204ENST00000459994 SLC25A30Q5SVS4 291 aa13.64□□□□□ -0.23
SDF4-204ENST00000459994 SHEQ5VZ18 495 aa13.64□□□□□ -0.23
SDF4-204ENST00000459994 LEG1Q6P5S2 330 aa13.64□□□□□ -0.23
SDF4-204ENST00000459994 C20orf204Q6ZNR8 217 aa13.64□□□□□ -0.23
SDF4-204ENST00000459994 ZNF100Q8IYN0 542 aa13.64□□□□□ -0.23
SDF4-204ENST00000459994 LRRC75A-AS1Q8N1F1 130 aa13.64□□□□□ -0.23
SDF4-204ENST00000459994 TCEANCQ8N8B7 351 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms