RNA–Protein interactions for RNA: ENST00000459727.5

HDAC3-202, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-202ENST00000459727 PLPP3O14495 311 aa7.98□□□□□ -1.13
HDAC3-202ENST00000459727 MAGEB4O15481 346 aaPredicted RBP7.98□□□□□ -1.13
HDAC3-202ENST00000459727 OIP5O43482 229 aa7.98□□□□□ -1.13
HDAC3-202ENST00000459727 SLC16A7O60669 478 aa7.98□□□□□ -1.13
HDAC3-202ENST00000459727 RP2O75695 350 aa7.98□□□□□ -1.13
HDAC3-202ENST00000459727 CRYZL1O95825 349 aa7.98□□□□□ -1.13
HDAC3-202ENST00000459727 CTSBP07858 339 aa7.98□□□□□ -1.13
HDAC3-202ENST00000459727 ERCC1P07992 297 aaPredicted RBP7.98□□□□□ -1.13
HDAC3-202ENST00000459727 SPARCP09486 303 aa7.98□□□□□ -1.13
HDAC3-202ENST00000459727 CD37P11049 281 aa7.98□□□□□ -1.13
HDAC3-202ENST00000459727 GABRA1P14867 456 aa7.98□□□□□ -1.13
HDAC3-202ENST00000459727 GLB1P16278 677 aa7.98□□□□□ -1.13
HDAC3-202ENST00000459727 ADRA2CP18825 462 aa7.98□□□□□ -1.13
HDAC3-202ENST00000459727 CXCL3P19876 107 aa7.98□□□□□ -1.13
HDAC3-202ENST00000459727 ABCD3P28288 659 aa7.98□□□□□ -1.13
HDAC3-202ENST00000459727 AGTR1P30556 359 aa7.98□□□□□ -1.13
HDAC3-202ENST00000459727 CCKBRP32239 447 aa7.98□□□□□ -1.13
HDAC3-202ENST00000459727 LTBRP36941 435 aa7.98□□□□□ -1.13
HDAC3-202ENST00000459727 DNASE1L1P49184 302 aa7.98□□□□□ -1.13
HDAC3-202ENST00000459727 POU3F4P49335 361 aa7.98□□□□□ -1.13
HDAC3-202ENST00000459727 GSK3AP49840 483 aa7.98□□□□□ -1.13
HDAC3-202ENST00000459727 NR0B1P51843 470 aaKnown RBP7.98□□□□□ -1.13
HDAC3-202ENST00000459727 GFERP55789 205 aa7.98□□□□□ -1.13
HDAC3-202ENST00000459727 BAMBIQ13145 260 aa7.98□□□□□ -1.13
HDAC3-202ENST00000459727 EIF3IQ13347 325 aaKnown RBP7.98□□□□□ -1.13
HDAC3-202ENST00000459727 ACKR1Q16570 336 aa7.98□□□□□ -1.13
HDAC3-202ENST00000459727 CLVS2Q5SYC1 327 aa7.98□□□□□ -1.13
HDAC3-202ENST00000459727 SFRP4Q6FHJ7 346 aaPredicted RBP7.98□□□□□ -1.13
HDAC3-202ENST00000459727 TMEM205Q6UW68 189 aa7.98□□□□□ -1.13
HDAC3-202ENST00000459727 ESPNLQ6ZVH7 1005 aa7.98□□□□□ -1.13
HDAC3-202ENST00000459727 RHOUQ7L0Q8 258 aa7.98□□□□□ -1.13
HDAC3-202ENST00000459727 NLRC3Q7RTR2 1065 aa7.98□□□□□ -1.13
HDAC3-202ENST00000459727 RABEPKQ7Z6M1 372 aa7.98□□□□□ -1.13
HDAC3-202ENST00000459727 ADGRE4PQ86SQ3 457 aa7.98□□□□□ -1.13
HDAC3-202ENST00000459727 SYT9Q86SS6 491 aa7.98□□□□□ -1.13
HDAC3-202ENST00000459727 C9orf40Q8IXQ3 194 aa7.98□□□□□ -1.13
HDAC3-202ENST00000459727 PM20D2Q8IYS1 436 aa7.98□□□□□ -1.13
HDAC3-202ENST00000459727 IZUMO1Q8IYV9 350 aa7.98□□□□□ -1.13
HDAC3-202ENST00000459727 ELMOD2Q8IZ81 293 aa7.98□□□□□ -1.13
HDAC3-202ENST00000459727 OR8H3Q8N146 312 aa7.98□□□□□ -1.13
HDAC3-202ENST00000459727 DTX3Q8N9I9 347 aa7.98□□□□□ -1.13
HDAC3-202ENST00000459727 ADPRHL1Q8NDY3 354 aa7.98□□□□□ -1.13
HDAC3-202ENST00000459727 OR5L2Q8NGL0 311 aa7.98□□□□□ -1.13
HDAC3-202ENST00000459727 OR8K3Q8NH51 312 aa7.98□□□□□ -1.13
HDAC3-202ENST00000459727 NUBPLQ8TB37 319 aa7.98□□□□□ -1.13
HDAC3-202ENST00000459727 SUN5Q8TC36 379 aa7.98□□□□□ -1.13
HDAC3-202ENST00000459727 FAM3DQ96BQ1 224 aa7.98□□□□□ -1.13
HDAC3-202ENST00000459727 DDIT4LQ96D03 193 aa7.98□□□□□ -1.13
HDAC3-202ENST00000459727 SHDQ96IW2 340 aa7.98□□□□□ -1.13
HDAC3-202ENST00000459727 DPYSL5Q9BPU6 564 aa7.98□□□□□ -1.13
HDAC3-202ENST00000459727 GINS4Q9BRT9 223 aa7.98□□□□□ -1.13
HDAC3-202ENST00000459727 PTDSS2Q9BVG9 487 aa7.98□□□□□ -1.13
HDAC3-202ENST00000459727 NUDT9Q9BW91 350 aa7.98□□□□□ -1.13
HDAC3-202ENST00000459727 GSX2Q9BZM3 304 aa7.98□□□□□ -1.13
HDAC3-202ENST00000459727 ANKRD10Q9NXR5 420 aa7.98□□□□□ -1.13
HDAC3-202ENST00000459727 GLTPQ9NZD2 209 aa7.98□□□□□ -1.13
HDAC3-202ENST00000459727 KLK11Q9UBX7 282 aa7.98□□□□□ -1.13
HDAC3-202ENST00000459727 CYB5R1Q9UHQ9 305 aa7.98□□□□□ -1.13
HDAC3-202ENST00000459727 NPIPA1Q9UND3 350 aa7.98□□□□□ -1.13
HDAC3-202ENST00000459727 KLHDC2Q9Y2U9 406 aa7.98□□□□□ -1.13
HDAC3-202ENST00000459727 SCN3AQ9NY46 2000 aa7.97□□□□□ -1.13
HDAC3-202ENST00000459727 TRAV8-7A0A075B6U6 113 aa7.97□□□□□ -1.13
HDAC3-202ENST00000459727 IGHV1OR21-1A0A087WYE8 117 aa7.97□□□□□ -1.13
HDAC3-202ENST00000459727 TVP23AA6NH52 213 aa7.97□□□□□ -1.13
HDAC3-202ENST00000459727 TMEM200CA6NKL6 621 aa7.97□□□□□ -1.13
HDAC3-202ENST00000459727 FAM171A2A8MVW0 826 aa7.97□□□□□ -1.13
HDAC3-202ENST00000459727 LEUTXA8MZ59 168 aa7.97□□□□□ -1.13
HDAC3-202ENST00000459727 PRR32B1ATL7 298 aa7.97□□□□□ -1.13
HDAC3-202ENST00000459727 IDSB3KWA1 339 aa7.97□□□□□ -1.13
HDAC3-202ENST00000459727 B8ZZF3 427 aa7.97□□□□□ -1.13
HDAC3-202ENST00000459727 F5H5P2 479 aa7.97□□□□□ -1.13
HDAC3-202ENST00000459727 FADS1O60427 444 aa7.97□□□□□ -1.13
HDAC3-202ENST00000459727 GMDSO60547 372 aa7.97□□□□□ -1.13
HDAC3-202ENST00000459727 PIAS2O75928 621 aa7.97□□□□□ -1.13
HDAC3-202ENST00000459727 PMS2P2O95744 297 aa7.97□□□□□ -1.13
HDAC3-202ENST00000459727 MAS1P04201 325 aa7.97□□□□□ -1.13
HDAC3-202ENST00000459727 ADRB1P08588 477 aa7.97□□□□□ -1.13
HDAC3-202ENST00000459727 GTF2F2P13984 249 aa7.97□□□□□ -1.13
HDAC3-202ENST00000459727 PNLIPP16233 465 aa7.97□□□□□ -1.13
HDAC3-202ENST00000459727 CSRP1P21291 193 aaKnown RBP7.97□□□□□ -1.13
HDAC3-202ENST00000459727 NFYAP23511 347 aaPredicted RBP7.97□□□□□ -1.13
HDAC3-202ENST00000459727 HTR2CP28335 458 aa7.97□□□□□ -1.13
HDAC3-202ENST00000459727 KIR3DL2P43630 455 aa7.97□□□□□ -1.13
HDAC3-202ENST00000459727 CSNK1EP49674 416 aaKnown RBP7.97□□□□□ -1.13
HDAC3-202ENST00000459727 ZP1P60852 638 aa7.97□□□□□ -1.13
HDAC3-202ENST00000459727 ACY1Q03154 408 aa7.97□□□□□ -1.13
HDAC3-202ENST00000459727 PUDPQ08623 228 aa7.97□□□□□ -1.13
HDAC3-202ENST00000459727 EXOSC2Q13868 293 aaKnown RBP7.97□□□□□ -1.13
HDAC3-202ENST00000459727 COL9A2Q14055 689 aaPredicted RBP7.97□□□□□ -1.13
HDAC3-202ENST00000459727 EIF2B1Q14232 305 aaKnown RBP7.97□□□□□ -1.13
HDAC3-202ENST00000459727 OPCMLQ14982 345 aa7.97□□□□□ -1.13
HDAC3-202ENST00000459727 PCK2Q16822 640 aa7.97□□□□□ -1.13
HDAC3-202ENST00000459727 LINC00303Q3SY05 128 aa7.97□□□□□ -1.13
HDAC3-202ENST00000459727 LGALSLQ3ZCW2 172 aaPredicted RBP7.97□□□□□ -1.13
HDAC3-202ENST00000459727 PHF19Q5T6S3 580 aa7.97□□□□□ -1.13
HDAC3-202ENST00000459727 TMEM225Q6GV28 225 aa7.97□□□□□ -1.13
HDAC3-202ENST00000459727 FAM166AQ6J272 317 aa7.97□□□□□ -1.13
HDAC3-202ENST00000459727 C3P1Q6ZMU1 363 aa7.97□□□□□ -1.13
HDAC3-202ENST00000459727 IDO2Q6ZQW0 420 aa7.97□□□□□ -1.13
HDAC3-202ENST00000459727 MARCH3Q86UD3 253 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms