RNA–Protein interactions for RNA: ENST00000456983.1

COL21A1-204, Transcript of collagen type XXI alpha 1 chain, human

TSL 3

Gene COL21A1, Length 480 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
COL21A1-204	ENST00000456983		A0A1W2PRG6	482 aa		4.12	□□□□□ -1.75
COL21A1-204	ENST00000456983	MBD3L4	A6NDZ8	208 aa	Predicted RBP	4.12	□□□□□ -1.75
COL21A1-204	ENST00000456983	MBD3L3	A6NE82	208 aa	Predicted RBP	4.12	□□□□□ -1.75
COL21A1-204	ENST00000456983	ARRDC5	A6NEK1	342 aa		4.12	□□□□□ -1.75
COL21A1-204	ENST00000456983	MBD3L5	A6NJ08	208 aa	Predicted RBP	4.12	□□□□□ -1.75
COL21A1-204	ENST00000456983	CD8B2	A6NJW9	211 aa		4.12	□□□□□ -1.75
COL21A1-204	ENST00000456983		H7C1C5	153 aa		4.12	□□□□□ -1.75
COL21A1-204	ENST00000456983		M0R129	80 aa		4.12	□□□□□ -1.75
COL21A1-204	ENST00000456983	PLPP3	O14495	311 aa		4.12	□□□□□ -1.75
COL21A1-204	ENST00000456983	SOCS2	O14508	198 aa		4.12	□□□□□ -1.75
COL21A1-204	ENST00000456983	LRRTM2	O43300	516 aa		4.12	□□□□□ -1.75
COL21A1-204	ENST00000456983	DNPH1	O43598	174 aa		4.12	□□□□□ -1.75
COL21A1-204	ENST00000456983	TRAF3IP2	O43734	574 aa	Predicted RBP	4.12	□□□□□ -1.75
COL21A1-204	ENST00000456983	EIF1B	O60739	113 aa	Known RBP	4.12	□□□□□ -1.75
COL21A1-204	ENST00000456983	CYTIP	O60759	359 aa		4.12	□□□□□ -1.75
COL21A1-204	ENST00000456983	MITF	O75030	526 aa	Predicted RBP	4.12	□□□□□ -1.75
COL21A1-204	ENST00000456983	NDUFB2	O95178	105 aa		4.12	□□□□□ -1.75
COL21A1-204	ENST00000456983	ATP6V1G2	O95670	118 aa		4.12	□□□□□ -1.75
COL21A1-204	ENST00000456983	HPR	P00739	348 aa		4.12	□□□□□ -1.75
COL21A1-204	ENST00000456983	ADA	P00813	363 aa		4.12	□□□□□ -1.75
COL21A1-204	ENST00000456983	IGHV3-9	P01782	118 aa		4.12	□□□□□ -1.75
COL21A1-204	ENST00000456983	IGFBP1	P08833	259 aa	Predicted RBP	4.12	□□□□□ -1.75
COL21A1-204	ENST00000456983	STS	P08842	583 aa		4.12	□□□□□ -1.75
COL21A1-204	ENST00000456983	ASAH2B	P0C7U1	165 aa		4.12	□□□□□ -1.75
COL21A1-204	ENST00000456983	HLA-DOB	P13765	273 aa		4.12	□□□□□ -1.75
COL21A1-204	ENST00000456983	PLA2G2A	P14555	144 aa		4.12	□□□□□ -1.75
COL21A1-204	ENST00000456983	FPR3	P25089	353 aa		4.12	□□□□□ -1.75
COL21A1-204	ENST00000456983	FKBP2	P26885	142 aa	Known RBP	4.12	□□□□□ -1.75
COL21A1-204	ENST00000456983	UQCRC1	P31930	480 aa		4.12	□□□□□ -1.75
COL21A1-204	ENST00000456983	PTGER4	P35408	488 aa		4.12	□□□□□ -1.75
COL21A1-204	ENST00000456983	CLK1	P49759	484 aa	Known RBP	4.12	□□□□□ -1.75
COL21A1-204	ENST00000456983	P2RY4	P51582	365 aa		4.12	□□□□□ -1.75
COL21A1-204	ENST00000456983	MAP2K6	P52564	334 aa		4.12	□□□□□ -1.75
COL21A1-204	ENST00000456983	CLDN17	P56750	224 aa		4.12	□□□□□ -1.75
COL21A1-204	ENST00000456983	PROK1	P58294	105 aa		4.12	□□□□□ -1.75
COL21A1-204	ENST00000456983	LCN6	P62502	163 aa		4.12	□□□□□ -1.75
COL21A1-204	ENST00000456983	RPS4X	P62701	263 aa	Known RBP	4.12	□□□□□ -1.75
COL21A1-204	ENST00000456983	ERVK-25	P63136	954 aa		4.12	□□□□□ -1.75
COL21A1-204	ENST00000456983	PRKCD	Q05655	676 aa		4.12	□□□□□ -1.75
COL21A1-204	ENST00000456983	CD47	Q08722	323 aa		4.12	□□□□□ -1.75
COL21A1-204	ENST00000456983	PMPCA	Q10713	525 aa		4.12	□□□□□ -1.75
COL21A1-204	ENST00000456983	TSPAN31	Q12999	210 aa		4.12	□□□□□ -1.75
COL21A1-204	ENST00000456983	KRR1	Q13601	381 aa	Known RBP	4.12	□□□□□ -1.75
COL21A1-204	ENST00000456983	GK3P	Q14409	553 aa		4.12	□□□□□ -1.75
COL21A1-204	ENST00000456983	MFSD13A	Q14CX5	517 aa		4.12	□□□□□ -1.75
COL21A1-204	ENST00000456983	RNPS1	Q15287	305 aa	Known RBP	4.12	□□□□□ -1.75
COL21A1-204	ENST00000456983	TAF11	Q15544	211 aa		4.12	□□□□□ -1.75
COL21A1-204	ENST00000456983	SLC36A3	Q495N2	470 aa		4.12	□□□□□ -1.75
COL21A1-204	ENST00000456983	ALG10	Q5BKT4	473 aa		4.12	□□□□□ -1.75
COL21A1-204	ENST00000456983	TMEM225	Q6GV28	225 aa		4.12	□□□□□ -1.75
COL21A1-204	ENST00000456983	ZNF770	Q6IQ21	691 aa	Predicted RBP	4.12	□□□□□ -1.75
COL21A1-204	ENST00000456983	NIPAL3	Q6P499	406 aa		4.12	□□□□□ -1.75
COL21A1-204	ENST00000456983	VWA1	Q6PCB0	445 aa		4.12	□□□□□ -1.75
COL21A1-204	ENST00000456983	SMARCD3	Q6STE5	483 aa		4.12	□□□□□ -1.75
COL21A1-204	ENST00000456983	KLHL17	Q6TDP4	642 aa		4.12	□□□□□ -1.75
COL21A1-204	ENST00000456983	SEM1	Q6ZVN7	128 aa		4.12	□□□□□ -1.75
COL21A1-204	ENST00000456983	H1FNT	Q75WM6	255 aa	Predicted RBP	4.12	□□□□□ -1.75
COL21A1-204	ENST00000456983	KIF18B	Q86Y91	864 aa		4.12	□□□□□ -1.75
COL21A1-204	ENST00000456983	CCDC71	Q8IV32	467 aa	Predicted RBP	4.12	□□□□□ -1.75
COL21A1-204	ENST00000456983	TUSC5	Q8IXB3	177 aa		4.12	□□□□□ -1.75
COL21A1-204	ENST00000456983	RNF113B	Q8IZP6	322 aa	Known RBP	4.12	□□□□□ -1.75
COL21A1-204	ENST00000456983	CBR4	Q8N4T8	237 aa		4.12	□□□□□ -1.75
COL21A1-204	ENST00000456983	SCAI	Q8N9R8	606 aa		4.12	□□□□□ -1.75
COL21A1-204	ENST00000456983	ADPRHL1	Q8NDY3	354 aa		4.12	□□□□□ -1.75
COL21A1-204	ENST00000456983	NOXO1	Q8NFA2	376 aa		4.12	□□□□□ -1.75
COL21A1-204	ENST00000456983	OR9K2	Q8NGE7	335 aa		4.12	□□□□□ -1.75
COL21A1-204	ENST00000456983	OR8D4	Q8NGM9	314 aa		4.12	□□□□□ -1.75
COL21A1-204	ENST00000456983	OR6S1	Q8NH40	331 aa		4.12	□□□□□ -1.75
COL21A1-204	ENST00000456983	MBD3L2	Q8NHZ7	208 aa	Predicted RBP	4.12	□□□□□ -1.75
COL21A1-204	ENST00000456983	ZPLD1	Q8TCW7	415 aa		4.12	□□□□□ -1.75
COL21A1-204	ENST00000456983	MAGEE2	Q8TD90	523 aa	Predicted RBP	4.12	□□□□□ -1.75
COL21A1-204	ENST00000456983	RASD2	Q96D21	266 aa		4.12	□□□□□ -1.75
COL21A1-204	ENST00000456983	SAMD8	Q96LT4	415 aa		4.12	□□□□□ -1.75
COL21A1-204	ENST00000456983	ZNF570	Q96NI8	536 aa		4.12	□□□□□ -1.75
COL21A1-204	ENST00000456983	TSPAN32	Q96QS1	320 aa		4.12	□□□□□ -1.75
COL21A1-204	ENST00000456983	FEV	Q99581	238 aa		4.12	□□□□□ -1.75
COL21A1-204	ENST00000456983	PSD2	Q9BQI7	771 aa		4.12	□□□□□ -1.75
COL21A1-204	ENST00000456983	TTYH2	Q9BSA4	534 aa		4.12	□□□□□ -1.75
COL21A1-204	ENST00000456983	WAC	Q9BTA9	647 aa		4.12	□□□□□ -1.75
COL21A1-204	ENST00000456983	C9orf16	Q9BUW7	83 aa		4.12	□□□□□ -1.75
COL21A1-204	ENST00000456983	EMC6	Q9BV81	110 aa		4.12	□□□□□ -1.75
COL21A1-204	ENST00000456983	KATNB1	Q9BVA0	655 aa		4.12	□□□□□ -1.75
COL21A1-204	ENST00000456983	IFT27	Q9BW83	186 aa		4.12	□□□□□ -1.75
COL21A1-204	ENST00000456983	PLA2G12A	Q9BZM1	189 aa		4.12	□□□□□ -1.75
COL21A1-204	ENST00000456983	UCK2	Q9BZX2	261 aa		4.12	□□□□□ -1.75
COL21A1-204	ENST00000456983	GABARAPL1	Q9H0R8	117 aa		4.12	□□□□□ -1.75
COL21A1-204	ENST00000456983	OR52D1	Q9H346	318 aa		4.12	□□□□□ -1.75
COL21A1-204	ENST00000456983	FN3K	Q9H479	309 aa		4.12	□□□□□ -1.75
COL21A1-204	ENST00000456983	DCLRE1B	Q9H816	532 aa		4.12	□□□□□ -1.75
COL21A1-204	ENST00000456983	RNF122	Q9H9V4	155 aa		4.12	□□□□□ -1.75
COL21A1-204	ENST00000456983	PAPOLB	Q9NRJ5	636 aa	Known RBP	4.12	□□□□□ -1.75
COL21A1-204	ENST00000456983	INIP	Q9NRY2	104 aa		4.12	□□□□□ -1.75
COL21A1-204	ENST00000456983	MRPL39	Q9NYK5	338 aa	Known RBP	4.12	□□□□□ -1.75
COL21A1-204	ENST00000456983	B3GAT1	Q9P2W7	334 aa		4.12	□□□□□ -1.75
COL21A1-204	ENST00000456983	MGAT4B	Q9UQ53	548 aa		4.12	□□□□□ -1.75
COL21A1-204	ENST00000456983	RASD1	Q9Y272	281 aa		4.12	□□□□□ -1.75
COL21A1-204	ENST00000456983	TRAPPC4	Q9Y296	219 aa		4.12	□□□□□ -1.75
COL21A1-204	ENST00000456983	POFUT2	Q9Y2G5	429 aa		4.12	□□□□□ -1.75
COL21A1-204	ENST00000456983	ZNF835	Q9Y2P0	537 aa		4.12	□□□□□ -1.75
COL21A1-204	ENST00000456983	MEMO1	Q9Y316	297 aa		4.12	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms