RNA–Protein interactions for RNA: ENST00000456953.5

SNHG17-208, Transcript of small nucleolar RNA host gene 17, human

TSL 3 BASIC

Gene SNHG17, Length 546 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNHG17-208	ENST00000456953	PNMT	P11086	282 aa		11.2	□□□□□ -0.62
SNHG17-208	ENST00000456953	RPS4Y1	P22090	263 aa	Known RBP	11.2	□□□□□ -0.62
SNHG17-208	ENST00000456953	SELENOV	P59797	346 aa		11.2	□□□□□ -0.62
SNHG17-208	ENST00000456953	LCN2	P80188	198 aa		11.2	□□□□□ -0.62
SNHG17-208	ENST00000456953	ARMCX4	Q5H9R4	360 aa		11.2	□□□□□ -0.62
SNHG17-208	ENST00000456953	WBP2NL	Q6ICG8	309 aa		11.2	□□□□□ -0.62
SNHG17-208	ENST00000456953	PGM2L1	Q6PCE3	622 aa		11.2	□□□□□ -0.62
SNHG17-208	ENST00000456953	VRK2	Q86Y07	508 aa		11.2	□□□□□ -0.62
SNHG17-208	ENST00000456953	KDM8	Q8N371	416 aa		11.2	□□□□□ -0.62
SNHG17-208	ENST00000456953	SMYD1	Q8NB12	490 aa		11.2	□□□□□ -0.62
SNHG17-208	ENST00000456953	BHLHE22	Q8NFJ8	381 aa	Predicted RBP	11.2	□□□□□ -0.62
SNHG17-208	ENST00000456953	MFSD8	Q8NHS3	518 aa		11.2	□□□□□ -0.62
SNHG17-208	ENST00000456953	RASSF5	Q8WWW0	418 aa		11.2	□□□□□ -0.62
SNHG17-208	ENST00000456953	LZIC	Q8WZA0	190 aa		11.2	□□□□□ -0.62
SNHG17-208	ENST00000456953	TAMM41	Q96BW9	452 aa		11.2	□□□□□ -0.62
SNHG17-208	ENST00000456953	TPD52L3	Q96J77	140 aa		11.2	□□□□□ -0.62
SNHG17-208	ENST00000456953	NSMCE2	Q96MF7	247 aa		11.2	□□□□□ -0.62
SNHG17-208	ENST00000456953	OR2M2	Q96R28	347 aa		11.2	□□□□□ -0.62
SNHG17-208	ENST00000456953	NKIRAS2	Q9NYR9	191 aa		11.2	□□□□□ -0.62
SNHG17-208	ENST00000456953	ZNF69	Q9UC07	566 aa		11.2	□□□□□ -0.62
SNHG17-208	ENST00000456953	SLC7A8	Q9UHI5	535 aa		11.2	□□□□□ -0.62
SNHG17-208	ENST00000456953	RPS6KA6	Q9UK32	745 aa		11.2	□□□□□ -0.62
SNHG17-208	ENST00000456953	FBXL3	Q9UKT7	428 aa		11.2	□□□□□ -0.62
SNHG17-208	ENST00000456953	ZNF443	Q9Y2A4	671 aa	Predicted RBP	11.2	□□□□□ -0.62
SNHG17-208	ENST00000456953	WIPI2	Q9Y4P8	454 aa		11.2	□□□□□ -0.62
SNHG17-208	ENST00000456953	MMP24	Q9Y5R2	645 aa		11.2	□□□□□ -0.62
SNHG17-208	ENST00000456953	SLC22A23	A1A5C7	686 aa		11.19	□□□□□ -0.62
SNHG17-208	ENST00000456953	FTCDNL1	E5RQL4	147 aa		11.19	□□□□□ -0.62
SNHG17-208	ENST00000456953	AKAP8	O43823	692 aa	Known RBP	11.19	□□□□□ -0.62
SNHG17-208	ENST00000456953	MFN2	O95140	757 aa		11.19	□□□□□ -0.62
SNHG17-208	ENST00000456953	AHSA1	O95433	338 aa		11.19	□□□□□ -0.62
SNHG17-208	ENST00000456953	MDK	P21741	143 aa	Predicted RBP	11.19	□□□□□ -0.62
SNHG17-208	ENST00000456953	PRKAR1B	P31321	381 aa		11.19	□□□□□ -0.62
SNHG17-208	ENST00000456953	PTDSS1	P48651	473 aa	Known RBP	11.19	□□□□□ -0.62
SNHG17-208	ENST00000456953	COPZ1	P61923	177 aa		11.19	□□□□□ -0.62
SNHG17-208	ENST00000456953	PIGF	Q07326	219 aa		11.19	□□□□□ -0.62
SNHG17-208	ENST00000456953	TRAP1	Q12931	704 aa	Known RBP	11.19	□□□□□ -0.62
SNHG17-208	ENST00000456953	C1D	Q13901	141 aa	Known RBP	11.19	□□□□□ -0.62
SNHG17-208	ENST00000456953	FLOT2	Q14254	428 aa		11.19	□□□□□ -0.62
SNHG17-208	ENST00000456953	CYBRD1	Q53TN4	286 aa		11.19	□□□□□ -0.62
SNHG17-208	ENST00000456953	C1orf146	Q5VVC0	180 aa		11.19	□□□□□ -0.62
SNHG17-208	ENST00000456953	CYP2R1	Q6VVX0	501 aa		11.19	□□□□□ -0.62
SNHG17-208	ENST00000456953	ZNF627	Q7L945	461 aa		11.19	□□□□□ -0.62
SNHG17-208	ENST00000456953	WDFY1	Q8IWB7	410 aa		11.19	□□□□□ -0.62
SNHG17-208	ENST00000456953	TMEM123	Q8N131	208 aa		11.19	□□□□□ -0.62
SNHG17-208	ENST00000456953	CADM2	Q8N3J6	435 aa		11.19	□□□□□ -0.62
SNHG17-208	ENST00000456953	STK35	Q8TDR2	534 aa		11.19	□□□□□ -0.62
SNHG17-208	ENST00000456953	SNX33	Q8WV41	574 aa		11.19	□□□□□ -0.62
SNHG17-208	ENST00000456953	RAB1C	Q92928	201 aa		11.19	□□□□□ -0.62
SNHG17-208	ENST00000456953	OXGR1	Q96P68	337 aa		11.19	□□□□□ -0.62
SNHG17-208	ENST00000456953	GAL3ST1	Q99999	423 aa		11.19	□□□□□ -0.62
SNHG17-208	ENST00000456953	MMP27	Q9H306	513 aa		11.19	□□□□□ -0.62
SNHG17-208	ENST00000456953	GORASP2	Q9H8Y8	452 aa		11.19	□□□□□ -0.62
SNHG17-208	ENST00000456953	PDP1	Q9P0J1	537 aa	Predicted RBP	11.19	□□□□□ -0.62
SNHG17-208	ENST00000456953	TAAR3P	Q9P1P4	343 aa		11.19	□□□□□ -0.62
SNHG17-208	ENST00000456953	ACTR3B	Q9P1U1	418 aa		11.19	□□□□□ -0.62
SNHG17-208	ENST00000456953	B3GAT1	Q9P2W7	334 aa		11.19	□□□□□ -0.62
SNHG17-208	ENST00000456953	BAG5	Q9UL15	447 aa		11.19	□□□□□ -0.62
SNHG17-208	ENST00000456953	ARHGAP32	A7KAX9	2087 aa		11.19	□□□□□ -0.62
SNHG17-208	ENST00000456953	CDHR4	A6H8M9	788 aa		11.18	□□□□□ -0.62
SNHG17-208	ENST00000456953		M0R3G1	203 aa		11.18	□□□□□ -0.62
SNHG17-208	ENST00000456953	TRAF3IP2	O43734	574 aa	Predicted RBP	11.18	□□□□□ -0.62
SNHG17-208	ENST00000456953	ALX3	O95076	343 aa		11.18	□□□□□ -0.62
SNHG17-208	ENST00000456953	RAB36	O95755	333 aa		11.18	□□□□□ -0.62
SNHG17-208	ENST00000456953	GTF2E2	P29084	291 aa	Known RBP	11.18	□□□□□ -0.62
SNHG17-208	ENST00000456953	ACAA2	P42765	397 aa	Known RBP	11.18	□□□□□ -0.62
SNHG17-208	ENST00000456953	GIPR	P48546	466 aa		11.18	□□□□□ -0.62
SNHG17-208	ENST00000456953	KLF3	P57682	345 aa	Predicted RBP	11.18	□□□□□ -0.62
SNHG17-208	ENST00000456953	MS4A2	Q01362	244 aa		11.18	□□□□□ -0.62
SNHG17-208	ENST00000456953	SLC9A3R2	Q15599	337 aa		11.18	□□□□□ -0.62
SNHG17-208	ENST00000456953	HFE	Q30201	348 aa		11.18	□□□□□ -0.62
SNHG17-208	ENST00000456953	ALKBH6	Q3KRA9	238 aa		11.18	□□□□□ -0.62
SNHG17-208	ENST00000456953	DHRS4L2	Q6PKH6	230 aa		11.18	□□□□□ -0.62
SNHG17-208	ENST00000456953	ZNF813	Q6ZN06	617 aa		11.18	□□□□□ -0.62
SNHG17-208	ENST00000456953	ZNF836	Q6ZNA1	936 aa		11.18	□□□□□ -0.62
SNHG17-208	ENST00000456953	FKBP9P1	Q75LS8	142 aa		11.18	□□□□□ -0.62
SNHG17-208	ENST00000456953	BCL6B	Q8N143	479 aa	Predicted RBP	11.18	□□□□□ -0.62
SNHG17-208	ENST00000456953	DEFB108B	Q8NET1	73 aa		11.18	□□□□□ -0.62
SNHG17-208	ENST00000456953	WFDC12	Q8WWY7	111 aa		11.18	□□□□□ -0.62
SNHG17-208	ENST00000456953	TMIGD2	Q96BF3	282 aa		11.18	□□□□□ -0.62
SNHG17-208	ENST00000456953	SLC25A36	Q96CQ1	311 aa		11.18	□□□□□ -0.62
SNHG17-208	ENST00000456953	ZNF48	Q96MX3	618 aa	Predicted RBP	11.18	□□□□□ -0.62
SNHG17-208	ENST00000456953	RLIM	Q9NVW2	624 aa		11.18	□□□□□ -0.62
SNHG17-208	ENST00000456953	SLCO1C1	Q9NYB5	712 aa		11.18	□□□□□ -0.62
SNHG17-208	ENST00000456953	SAMD4A	Q9UPU9	718 aa	Known RBP	11.18	□□□□□ -0.62
SNHG17-208	ENST00000456953	POMP	Q9Y244	141 aa		11.18	□□□□□ -0.62
SNHG17-208	ENST00000456953		V9GYQ6	96 aa		11.18	□□□□□ -0.62
SNHG17-208	ENST00000456953	IGLV3-9	A0A075B6K5	115 aa		11.17	□□□□□ -0.62
SNHG17-208	ENST00000456953		A0A1B0GUS0	222 aa		11.17	□□□□□ -0.62
SNHG17-208	ENST00000456953	LOC102725191	A0A1B0GVB3	256 aa		11.17	□□□□□ -0.62
SNHG17-208	ENST00000456953		M0QZ24	198 aa		11.17	□□□□□ -0.62
SNHG17-208	ENST00000456953	ACOT8	O14734	319 aa		11.17	□□□□□ -0.62
SNHG17-208	ENST00000456953	TPST1	O60507	370 aa		11.17	□□□□□ -0.62
SNHG17-208	ENST00000456953	FOXH1	O75593	365 aa		11.17	□□□□□ -0.62
SNHG17-208	ENST00000456953	KNG1	P01042	644 aa		11.17	□□□□□ -0.62
SNHG17-208	ENST00000456953	GKN3P	P0CG01	181 aa		11.17	□□□□□ -0.62
SNHG17-208	ENST00000456953	NQO1	P15559	274 aa	Known RBP	11.17	□□□□□ -0.62
SNHG17-208	ENST00000456953	ZNF250	P15622	560 aa		11.17	□□□□□ -0.62
SNHG17-208	ENST00000456953	ATP6V1B2	P21281	511 aa		11.17	□□□□□ -0.62
SNHG17-208	ENST00000456953	CRYBA2	P53672	197 aa		11.17	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms