RNA–Protein interactions for RNA: ENST00000456367.5

PCDH9-203, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 5,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-203ENST00000456367 SIRT5Q9NXA8 310 aa4.6□□□□□ -1.67
PCDH9-203ENST00000456367 PPP1R14DQ9NXH3 145 aa4.6□□□□□ -1.67
PCDH9-203ENST00000456367 RBPJLQ9UBG7 517 aa4.6□□□□□ -1.67
PCDH9-203ENST00000456367 METTL1Q9UBP6 276 aaKnown RBP4.6□□□□□ -1.67
PCDH9-203ENST00000456367 PLAGL1Q9UM63 463 aa4.6□□□□□ -1.67
PCDH9-203ENST00000456367 RHBDD3Q9Y3P4 386 aa4.6□□□□□ -1.67
PCDH9-203ENST00000456367 TOGARAM1Q9Y4F4 1720 aa4.6□□□□□ -1.67
PCDH9-203ENST00000456367 SCN4AP35499 1836 aa4.6□□□□□ -1.67
PCDH9-203ENST00000456367 FIGNL2A6NMB9 653 aa4.6□□□□□ -1.67
PCDH9-203ENST00000456367 CCSO14618 274 aa4.6□□□□□ -1.67
PCDH9-203ENST00000456367 PTGESO14684 152 aa4.6□□□□□ -1.67
PCDH9-203ENST00000456367 PLSCR1O15162 318 aa4.6□□□□□ -1.67
PCDH9-203ENST00000456367 ST8SIA5O15466 376 aa4.6□□□□□ -1.67
PCDH9-203ENST00000456367 NME2P1O60361 137 aa4.6□□□□□ -1.67
PCDH9-203ENST00000456367 CD3DP04234 171 aa4.6□□□□□ -1.67
PCDH9-203ENST00000456367 LIMS3P0CW19 117 aa4.6□□□□□ -1.67
PCDH9-203ENST00000456367 LIMS4P0CW20 117 aa4.6□□□□□ -1.67
PCDH9-203ENST00000456367 AADACP22760 399 aa4.6□□□□□ -1.67
PCDH9-203ENST00000456367 CSNK1A1P48729 337 aa4.6□□□□□ -1.67
PCDH9-203ENST00000456367 DHPSP49366 369 aaPredicted RBP4.6□□□□□ -1.67
PCDH9-203ENST00000456367 FXYD4P59646 89 aa4.6□□□□□ -1.67
PCDH9-203ENST00000456367 ACTR1AP61163 376 aa4.6□□□□□ -1.67
PCDH9-203ENST00000456367 HTRA3P83110 453 aa4.6□□□□□ -1.67
PCDH9-203ENST00000456367 NFATC4Q14934 902 aa4.6□□□□□ -1.67
PCDH9-203ENST00000456367 PDGFRLQ15198 375 aa4.6□□□□□ -1.67
PCDH9-203ENST00000456367 RAB30Q15771 203 aa4.6□□□□□ -1.67
PCDH9-203ENST00000456367 NHLRC3Q5JS37 347 aa4.6□□□□□ -1.67
PCDH9-203ENST00000456367 LRRC73Q5JTD7 316 aa4.6□□□□□ -1.67
PCDH9-203ENST00000456367 GLYATL3Q5SZD4 288 aa4.6□□□□□ -1.67
PCDH9-203ENST00000456367 MRPL2Q5T653 305 aaKnown RBP4.6□□□□□ -1.67
PCDH9-203ENST00000456367 NSUN5P2Q63ZY6 315 aa4.6□□□□□ -1.67
PCDH9-203ENST00000456367 FAM180BQ6P0A1 224 aa4.6□□□□□ -1.67
PCDH9-203ENST00000456367 BTNL8Q6UX41 500 aa4.6□□□□□ -1.67
PCDH9-203ENST00000456367 VITQ6UXI7 678 aa4.6□□□□□ -1.67
PCDH9-203ENST00000456367 REC114Q7Z4M0 266 aa4.6□□□□□ -1.67
PCDH9-203ENST00000456367 HMGN2P46Q86SG4 172 aa4.6□□□□□ -1.67
PCDH9-203ENST00000456367 MCEMP1Q8IX19 187 aa4.6□□□□□ -1.67
PCDH9-203ENST00000456367 MSRB3Q8IXL7 192 aa4.6□□□□□ -1.67
PCDH9-203ENST00000456367 ZNF383Q8NA42 475 aa4.6□□□□□ -1.67
PCDH9-203ENST00000456367 ZNF439Q8NDP4 499 aa4.6□□□□□ -1.67
PCDH9-203ENST00000456367 ANKRD9Q96BM1 317 aaPredicted RBP4.6□□□□□ -1.67
PCDH9-203ENST00000456367 HHIPL1Q96JK4 782 aa4.6□□□□□ -1.67
PCDH9-203ENST00000456367 FAM210BQ96KR6 192 aa4.6□□□□□ -1.67
PCDH9-203ENST00000456367 AMDHD1Q96NU7 426 aa4.6□□□□□ -1.67
PCDH9-203ENST00000456367 TNFRSF13CQ96RJ3 184 aa4.6□□□□□ -1.67
PCDH9-203ENST00000456367 SELENOIQ9C0D9 397 aa4.6□□□□□ -1.67
PCDH9-203ENST00000456367 CTDSP1Q9GZU7 261 aa4.6□□□□□ -1.67
PCDH9-203ENST00000456367 OR10A2Q9H208 303 aa4.6□□□□□ -1.67
PCDH9-203ENST00000456367 FOXJ3Q9UPW0 622 aa4.6□□□□□ -1.67
PCDH9-203ENST00000456367 GOLT1BQ9Y3E0 138 aa4.6□□□□□ -1.67
PCDH9-203ENST00000456367 TMED3Q9Y3Q3 217 aa4.6□□□□□ -1.67
PCDH9-203ENST00000456367 SLC5A10A0PJK1 596 aa4.6□□□□□ -1.67
PCDH9-203ENST00000456367 HEPACAM2A8MVW5 462 aa4.6□□□□□ -1.67
PCDH9-203ENST00000456367 TMEM189-UBE2V1I3L0A0 370 aa4.6□□□□□ -1.67
PCDH9-203ENST00000456367 GFYI3L273 518 aa4.6□□□□□ -1.67
PCDH9-203ENST00000456367 TERTO14746 1132 aaKnown RBP4.6□□□□□ -1.67
PCDH9-203ENST00000456367 MBTPS2O43462 519 aa4.6□□□□□ -1.67
PCDH9-203ENST00000456367 TRAF3IP2O43734 574 aaPredicted RBP4.6□□□□□ -1.67
PCDH9-203ENST00000456367 USP2O75604 605 aaPredicted RBP4.6□□□□□ -1.67
PCDH9-203ENST00000456367 LEFTY1O75610 366 aa4.6□□□□□ -1.67
PCDH9-203ENST00000456367 HLA-DOBP13765 273 aa4.6□□□□□ -1.67
PCDH9-203ENST00000456367 PTNP21246 168 aa4.6□□□□□ -1.67
PCDH9-203ENST00000456367 BCKDHBP21953 392 aa4.6□□□□□ -1.67
PCDH9-203ENST00000456367 TRHRP34981 398 aaPredicted RBP4.6□□□□□ -1.67
PCDH9-203ENST00000456367 GABRA2P47869 451 aa4.6□□□□□ -1.67
PCDH9-203ENST00000456367 HNRNPA3P51991 378 aaKnown RBP4.6□□□□□ -1.67
PCDH9-203ENST00000456367 SEC13P55735 322 aa4.6□□□□□ -1.67
PCDH9-203ENST00000456367 PFN3P60673 137 aa4.6□□□□□ -1.67
PCDH9-203ENST00000456367 NHLH2Q02577 135 aa4.6□□□□□ -1.67
PCDH9-203ENST00000456367 PDZD11Q5EBL8 140 aa4.6□□□□□ -1.67
PCDH9-203ENST00000456367 TFAP2EQ6VUC0 442 aa4.6□□□□□ -1.67
PCDH9-203ENST00000456367 STAC2Q6ZMT1 411 aa4.6□□□□□ -1.67
PCDH9-203ENST00000456367 MEX3BQ6ZN04 569 aaKnown RBP4.6□□□□□ -1.67
PCDH9-203ENST00000456367 GRINAQ7Z429 371 aa4.6□□□□□ -1.67
PCDH9-203ENST00000456367 ZNF429Q86V71 674 aa4.6□□□□□ -1.67
PCDH9-203ENST00000456367 DND1Q8IYX4 353 aaKnown RBP4.6□□□□□ -1.67
PCDH9-203ENST00000456367 CPXM2Q8N436 756 aa4.6□□□□□ -1.67
PCDH9-203ENST00000456367 FAM24BQ8N5W8 94 aa4.6□□□□□ -1.67
PCDH9-203ENST00000456367 OR14C36Q8NHC7 312 aa4.6□□□□□ -1.67
PCDH9-203ENST00000456367 RXFP4Q8TDU9 374 aa4.6□□□□□ -1.67
PCDH9-203ENST00000456367 TM4SF18Q96CE8 201 aa4.6□□□□□ -1.67
PCDH9-203ENST00000456367 DDIT4LQ96D03 193 aa4.6□□□□□ -1.67
PCDH9-203ENST00000456367 NAA11Q9BSU3 229 aaPredicted RBP4.6□□□□□ -1.67
PCDH9-203ENST00000456367 BARHL1Q9BZE3 327 aa4.6□□□□□ -1.67
PCDH9-203ENST00000456367 METTL9Q9H1A3 318 aa4.6□□□□□ -1.67
PCDH9-203ENST00000456367 HIPK2Q9H2X6 1198 aa4.6□□□□□ -1.67
PCDH9-203ENST00000456367 PARP11Q9NR21 331 aa4.6□□□□□ -1.67
PCDH9-203ENST00000456367 TDP1Q9NUW8 608 aa4.6□□□□□ -1.67
PCDH9-203ENST00000456367 NECAP2Q9NVZ3 263 aa4.6□□□□□ -1.67
PCDH9-203ENST00000456367 BET1LQ9NYM9 111 aa4.6□□□□□ -1.67
PCDH9-203ENST00000456367 KCNIP1Q9NZI2 227 aa4.6□□□□□ -1.67
PCDH9-203ENST00000456367 LPAR3Q9UBY5 353 aa4.6□□□□□ -1.67
PCDH9-203ENST00000456367 ZNF230Q9UIE0 474 aaPredicted RBP4.6□□□□□ -1.67
PCDH9-203ENST00000456367 MRPS28Q9Y2Q9 187 aaKnown RBP4.6□□□□□ -1.67
PCDH9-203ENST00000456367 LAMB1P07942 1786 aa4.59□□□□□ -1.67
PCDH9-203ENST00000456367 NPIPB15A6NHN6 443 aaPredicted RBP4.59□□□□□ -1.67
PCDH9-203ENST00000456367 VSTM2BA6NLU5 285 aa4.59□□□□□ -1.67
PCDH9-203ENST00000456367 ZNF729A6NN14 1252 aaPredicted RBP4.59□□□□□ -1.67
PCDH9-203ENST00000456367 SLC17A2O00624 439 aa4.59□□□□□ -1.67
PCDH9-203ENST00000456367 SLC31A2O15432 143 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms