RNA–Protein interactions for RNA: ENST00000455661.5

PTPRE-204, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 2

Gene PTPRE, Length 2,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-204ENST00000455661 IFI6P09912 130 aa12.42□□□□□ -0.42
PTPRE-204ENST00000455661 APEHP13798 732 aaKnown RBP12.42□□□□□ -0.42
PTPRE-204ENST00000455661 ABOP16442 354 aa12.42□□□□□ -0.42
PTPRE-204ENST00000455661 SDHAP31040 664 aa12.42□□□□□ -0.42
PTPRE-204ENST00000455661 POLR2GP62487 172 aaKnown RBP eCLIP12.42□□□□□ -0.42
PTPRE-204ENST00000455661 ADAM8P78325 824 aa12.42□□□□□ -0.42
PTPRE-204ENST00000455661 DEFB103AP81534 67 aa12.42□□□□□ -0.42
PTPRE-204ENST00000455661 ELOCQ15369 112 aa12.42□□□□□ -0.42
PTPRE-204ENST00000455661 ALG10Q5BKT4 473 aa12.42□□□□□ -0.42
PTPRE-204ENST00000455661 IL34Q6ZMJ4 242 aa12.42□□□□□ -0.42
PTPRE-204ENST00000455661 RNF44Q7L0R7 432 aa12.42□□□□□ -0.42
PTPRE-204ENST00000455661 CACUL1Q86Y37 369 aa12.42□□□□□ -0.42
PTPRE-204ENST00000455661 ZNF584Q8IVC4 421 aa12.42□□□□□ -0.42
PTPRE-204ENST00000455661 BAP18Q8IXM2 172 aa12.42□□□□□ -0.42
PTPRE-204ENST00000455661 ETFBKMTQ8IXQ9 262 aa12.42□□□□□ -0.42
PTPRE-204ENST00000455661 EXD3Q8N9H8 876 aa12.42□□□□□ -0.42
PTPRE-204ENST00000455661 C4orf45Q96LM5 186 aa12.42□□□□□ -0.42
PTPRE-204ENST00000455661 OR2A5Q96R48 311 aa12.42□□□□□ -0.42
PTPRE-204ENST00000455661 CRB3Q9BUF7 120 aa12.42□□□□□ -0.42
PTPRE-204ENST00000455661 TMEM100Q9NV29 134 aa12.42□□□□□ -0.42
PTPRE-204ENST00000455661 UQCC1Q9NVA1 299 aa12.42□□□□□ -0.42
PTPRE-204ENST00000455661 INSL6Q9Y581 213 aa12.42□□□□□ -0.42
PTPRE-204ENST00000455661 SCN2AQ99250 2005 aa12.41□□□□□ -0.42
PTPRE-204ENST00000455661 PDE4DIPQ5VU43 2346 aa12.41□□□□□ -0.42
PTPRE-204ENST00000455661 SGCEO43556 437 aa12.41□□□□□ -0.42
PTPRE-204ENST00000455661 CSN2P05814 226 aa12.41□□□□□ -0.42
PTPRE-204ENST00000455661 GLAP06280 429 aa12.41□□□□□ -0.42
PTPRE-204ENST00000455661 GUSBP08236 651 aa12.41□□□□□ -0.42
PTPRE-204ENST00000455661 LIPCP11150 499 aa12.41□□□□□ -0.42
PTPRE-204ENST00000455661 ZNF28P17035 718 aa12.41□□□□□ -0.42
PTPRE-204ENST00000455661 ALOX5APP20292 161 aa12.41□□□□□ -0.42
PTPRE-204ENST00000455661 ZBTB25P24278 435 aa12.41□□□□□ -0.42
PTPRE-204ENST00000455661 PNLIPRP2P54317 469 aa12.41□□□□□ -0.42
PTPRE-204ENST00000455661 SKP1P63208 163 aa12.41□□□□□ -0.42
PTPRE-204ENST00000455661 IL13RA1P78552 427 aa12.41□□□□□ -0.42
PTPRE-204ENST00000455661 NAAAQ02083 359 aa12.41□□□□□ -0.42
PTPRE-204ENST00000455661 ALG11Q2TAA5 492 aa12.41□□□□□ -0.42
PTPRE-204ENST00000455661 PLEKHN1Q494U1 663 aaPredicted RBP12.41□□□□□ -0.42
PTPRE-204ENST00000455661 NKAPLQ5M9Q1 402 aa12.41□□□□□ -0.42
PTPRE-204ENST00000455661 DPY19L4Q7Z388 723 aa12.41□□□□□ -0.42
PTPRE-204ENST00000455661 OR4K17Q8NGC6 315 aa12.41□□□□□ -0.42
PTPRE-204ENST00000455661 OR13C8Q8NGS7 320 aa12.41□□□□□ -0.42
PTPRE-204ENST00000455661 NANPQ8TBE9 248 aa12.41□□□□□ -0.42
PTPRE-204ENST00000455661 MITD1Q8WV92 249 aa12.41□□□□□ -0.42
PTPRE-204ENST00000455661 CTHRC1Q96CG8 243 aa12.41□□□□□ -0.42
PTPRE-204ENST00000455661 SLC41A2Q96JW4 573 aa12.41□□□□□ -0.42
PTPRE-204ENST00000455661 LRRC3BQ96PB8 259 aa12.41□□□□□ -0.42
PTPRE-204ENST00000455661 SLC6A7Q99884 636 aa12.41□□□□□ -0.42
PTPRE-204ENST00000455661 GAL3ST1Q99999 423 aa12.41□□□□□ -0.42
PTPRE-204ENST00000455661 SRMSQ9H3Y6 488 aa12.41□□□□□ -0.42
PTPRE-204ENST00000455661 GRHPRQ9UBQ7 328 aa12.41□□□□□ -0.42
PTPRE-204ENST00000455661 CKLFQ9UBR5 152 aa12.41□□□□□ -0.42
PTPRE-204ENST00000455661 EEF1E1-BLOC1S5C9J1V9 151 aa12.4□□□□□ -0.42
PTPRE-204ENST00000455661 F8VVB4 439 aa12.4□□□□□ -0.42
PTPRE-204ENST00000455661 F8VWA3 439 aa12.4□□□□□ -0.42
PTPRE-204ENST00000455661 SCAMP1O15126 338 aa12.4□□□□□ -0.42
PTPRE-204ENST00000455661 OR10H2O60403 315 aa12.4□□□□□ -0.42
PTPRE-204ENST00000455661 F12P00748 615 aaPredicted RBP12.4□□□□□ -0.42
PTPRE-204ENST00000455661 RENP00797 406 aa12.4□□□□□ -0.42
PTPRE-204ENST00000455661 CSTAP01040 98 aa12.4□□□□□ -0.42
PTPRE-204ENST00000455661 IGKV1D-16P01601 117 aa12.4□□□□□ -0.42
PTPRE-204ENST00000455661 S100A8P05109 93 aa12.4□□□□□ -0.42
PTPRE-204ENST00000455661 SMIM6P0DI80 62 aa12.4□□□□□ -0.42
PTPRE-204ENST00000455661 PGAM2P15259 253 aa12.4□□□□□ -0.42
PTPRE-204ENST00000455661 HTR2CP28335 458 aa12.4□□□□□ -0.42
PTPRE-204ENST00000455661 TACR3P29371 465 aa12.4□□□□□ -0.42
PTPRE-204ENST00000455661 KIR3DL2P43630 455 aa12.4□□□□□ -0.42
PTPRE-204ENST00000455661 SRSF3P84103 164 aaKnown RBP12.4□□□□□ -0.42
PTPRE-204ENST00000455661 PSG6Q00889 435 aa12.4□□□□□ -0.42
PTPRE-204ENST00000455661 ENPP2Q13822 863 aa12.4□□□□□ -0.42
PTPRE-204ENST00000455661 FAM53BQ14153 422 aa12.4□□□□□ -0.42
PTPRE-204ENST00000455661 ZNF141Q15928 474 aa12.4□□□□□ -0.42
PTPRE-204ENST00000455661 WDR38Q5JTN6 314 aa12.4□□□□□ -0.42
PTPRE-204ENST00000455661 PARGQ86W56 976 aa12.4□□□□□ -0.42
PTPRE-204ENST00000455661 PLPP7Q8NBV4 271 aa12.4□□□□□ -0.42
PTPRE-204ENST00000455661 TMEM52Q8NDY8 209 aa12.4□□□□□ -0.42
PTPRE-204ENST00000455661 SLC30A7Q8NEW0 376 aa12.4□□□□□ -0.42
PTPRE-204ENST00000455661 ZNF587Q96SQ5 575 aaPredicted RBP12.4□□□□□ -0.42
PTPRE-204ENST00000455661 VSIG4Q9Y279 399 aa12.4□□□□□ -0.42
PTPRE-204ENST00000455661 A0A0A6YYH2 397 aa12.4□□□□□ -0.42
PTPRE-204ENST00000455661 C9orf170A2RU37 121 aa12.4□□□□□ -0.42
PTPRE-204ENST00000455661 A6NJ64 397 aa12.4□□□□□ -0.42
PTPRE-204ENST00000455661 FABP1P07148 127 aa12.4□□□□□ -0.42
PTPRE-204ENST00000455661 ZNF806P0C7X5 589 aa12.4□□□□□ -0.42
PTPRE-204ENST00000455661 PSMB6P28072 239 aa12.4□□□□□ -0.42
PTPRE-204ENST00000455661 CXADRP78310 365 aa12.4□□□□□ -0.42
PTPRE-204ENST00000455661 PJVKQ0ZLH3 352 aa12.4□□□□□ -0.42
PTPRE-204ENST00000455661 PPP1R1AQ13522 171 aa12.4□□□□□ -0.42
PTPRE-204ENST00000455661 PEA15Q15121 130 aa12.4□□□□□ -0.42
PTPRE-204ENST00000455661 NKPD1Q17RQ9 610 aa12.4□□□□□ -0.42
PTPRE-204ENST00000455661 IGSF11Q5DX21 431 aa12.4□□□□□ -0.42
PTPRE-204ENST00000455661 RNASE10Q5GAN6 216 aaKnown RBP12.4□□□□□ -0.42
PTPRE-204ENST00000455661 FAM166AQ6J272 317 aa12.4□□□□□ -0.42
PTPRE-204ENST00000455661 PAPD4Q6PIY7 484 aaKnown RBP12.4□□□□□ -0.42
PTPRE-204ENST00000455661 KCTD9Q7L273 389 aa12.4□□□□□ -0.42
PTPRE-204ENST00000455661 ZSCAN1Q8NBB4 408 aa12.4□□□□□ -0.42
PTPRE-204ENST00000455661 OR4N2Q8NGD1 307 aa12.4□□□□□ -0.42
PTPRE-204ENST00000455661 OR6S1Q8NH40 331 aa12.4□□□□□ -0.42
PTPRE-204ENST00000455661 DCUN1D4Q92564 292 aa12.4□□□□□ -0.42
PTPRE-204ENST00000455661 INTS14Q96SY0 518 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms