RNA–Protein interactions for RNA: ENST00000453847.2

HMGN3P1-201, Transcript of high mobility group nucleosomal binding domain 3 pseudogene 1, humanhuman

BASIC

Gene HMGN3P1, Length 193 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3P1-201ENST00000453847 CD274Q9NZQ7 290 aa3.04□□□□□ -1.92
HMGN3P1-201ENST00000453847 ST3GAL6Q9Y274 331 aa3.04□□□□□ -1.92
HMGN3P1-201ENST00000453847 YARS2Q9Y2Z4 477 aaKnown RBP3.04□□□□□ -1.92
HMGN3P1-201ENST00000453847 NEUROG3Q9Y4Z2 214 aa3.04□□□□□ -1.92
HMGN3P1-201ENST00000453847 KPTNQ9Y664 436 aa3.04□□□□□ -1.92
HMGN3P1-201ENST00000453847 CAMTA1Q9Y6Y1 1673 aa3.04□□□□□ -1.92
HMGN3P1-201ENST00000453847 A0A0J9YXY3 114 aa3.03□□□□□ -1.92
HMGN3P1-201ENST00000453847 PSMB11A5LHX3 300 aa3.03□□□□□ -1.92
HMGN3P1-201ENST00000453847 SMKR1H3BMG3 65 aa3.03□□□□□ -1.92
HMGN3P1-201ENST00000453847 BCL2L11O43521 198 aa3.03□□□□□ -1.92
HMGN3P1-201ENST00000453847 DPM1O60762 260 aa3.03□□□□□ -1.92
HMGN3P1-201ENST00000453847 AQP8O94778 261 aa3.03□□□□□ -1.92
HMGN3P1-201ENST00000453847 UTS2O95399 124 aa3.03□□□□□ -1.92
HMGN3P1-201ENST00000453847 DCNP07585 359 aaKnown RBP3.03□□□□□ -1.92
HMGN3P1-201ENST00000453847 TACSTD2P09758 323 aa3.03□□□□□ -1.92
HMGN3P1-201ENST00000453847 RHOXF2BP0C7M4 288 aa3.03□□□□□ -1.92
HMGN3P1-201ENST00000453847 UBTFL6P0CB48 400 aaPredicted RBP3.03□□□□□ -1.92
HMGN3P1-201ENST00000453847 CMA1P23946 247 aa3.03□□□□□ -1.92
HMGN3P1-201ENST00000453847 COX7A1P24310 79 aa3.03□□□□□ -1.92
HMGN3P1-201ENST00000453847 LONP1P36776 959 aaKnown RBP3.03□□□□□ -1.92
HMGN3P1-201ENST00000453847 GPR4P46093 362 aa3.03□□□□□ -1.92
HMGN3P1-201ENST00000453847 RND2P52198 227 aa3.03□□□□□ -1.92
HMGN3P1-201ENST00000453847 UGT2B15P54855 530 aa3.03□□□□□ -1.92
HMGN3P1-201ENST00000453847 FGF8P55075 233 aaPredicted RBP3.03□□□□□ -1.92
HMGN3P1-201ENST00000453847 ZNF45Q02386 682 aa3.03□□□□□ -1.92
HMGN3P1-201ENST00000453847 AQP6Q13520 282 aa3.03□□□□□ -1.92
HMGN3P1-201ENST00000453847 KIAA0087Q14695 138 aa3.03□□□□□ -1.92
HMGN3P1-201ENST00000453847 TSC22D1Q15714 1073 aa3.03□□□□□ -1.92
HMGN3P1-201ENST00000453847 HIGD2BQ4VC39 106 aa3.03□□□□□ -1.92
HMGN3P1-201ENST00000453847 C9orf129Q5T035 196 aaKnown RBP3.03□□□□□ -1.92
HMGN3P1-201ENST00000453847 C6orf183Q5T699 404 aa3.03□□□□□ -1.92
HMGN3P1-201ENST00000453847 MARC1Q5VT66 337 aa3.03□□□□□ -1.92
HMGN3P1-201ENST00000453847 LCN12Q6JVE5 192 aa3.03□□□□□ -1.92
HMGN3P1-201ENST00000453847 IL34Q6ZMJ4 242 aa3.03□□□□□ -1.92
HMGN3P1-201ENST00000453847 LINC00173Q6ZV60 143 aa3.03□□□□□ -1.92
HMGN3P1-201ENST00000453847 TMEM135Q86UB9 458 aa3.03□□□□□ -1.92
HMGN3P1-201ENST00000453847 CBLN2Q8IUK8 224 aa3.03□□□□□ -1.92
HMGN3P1-201ENST00000453847 TMEM61Q8N0U2 210 aa3.03□□□□□ -1.92
HMGN3P1-201ENST00000453847 FAM58AQ8N1B3 248 aa3.03□□□□□ -1.92
HMGN3P1-201ENST00000453847 PNKDQ8N490 385 aa3.03□□□□□ -1.92
HMGN3P1-201ENST00000453847 TRAM1L1Q8N609 369 aa3.03□□□□□ -1.92
HMGN3P1-201ENST00000453847 INO80EQ8NBZ0 244 aaPredicted RBP3.03□□□□□ -1.92
HMGN3P1-201ENST00000453847 OR51F2Q8NH61 342 aa3.03□□□□□ -1.92
HMGN3P1-201ENST00000453847 ZNF596Q8TC21 504 aa3.03□□□□□ -1.92
HMGN3P1-201ENST00000453847 TCP10LQ8TDR4 215 aa3.03□□□□□ -1.92
HMGN3P1-201ENST00000453847 PIH1D2Q8WWB5 315 aa3.03□□□□□ -1.92
HMGN3P1-201ENST00000453847 RHOXF2Q9BQY4 288 aa3.03□□□□□ -1.92
HMGN3P1-201ENST00000453847 CHRNA10Q9GZZ6 450 aa3.03□□□□□ -1.92
HMGN3P1-201ENST00000453847 TMEM38AQ9H6F2 299 aa3.03□□□□□ -1.92
HMGN3P1-201ENST00000453847 CD209Q9NNX6 404 aa3.03□□□□□ -1.92
HMGN3P1-201ENST00000453847 SH2D2AQ9NP31 389 aa3.03□□□□□ -1.92
HMGN3P1-201ENST00000453847 CCL28Q9NRJ3 127 aa3.03□□□□□ -1.92
HMGN3P1-201ENST00000453847 ZNF275Q9NSD4 429 aaPredicted RBP3.03□□□□□ -1.92
HMGN3P1-201ENST00000453847 SAMSN1Q9NSI8 373 aaKnown RBP3.03□□□□□ -1.92
HMGN3P1-201ENST00000453847 VNN3Q9NY84 501 aa3.03□□□□□ -1.92
HMGN3P1-201ENST00000453847 BTNL2Q9UIR0 455 aa3.03□□□□□ -1.92
HMGN3P1-201ENST00000453847 ASF1AQ9Y294 204 aa3.03□□□□□ -1.92
HMGN3P1-201ENST00000453847 GOLT1BQ9Y3E0 138 aa3.03□□□□□ -1.92
HMGN3P1-201ENST00000453847 CEMIPQ8WUJ3 1361 aa3.02□□□□□ -1.93
HMGN3P1-201ENST00000453847 FAM168BA1KXE4 195 aa3.02□□□□□ -1.93
HMGN3P1-201ENST00000453847 SLC22A20A6NK97 555 aa3.02□□□□□ -1.93
HMGN3P1-201ENST00000453847 ZNF879B4DU55 563 aa3.02□□□□□ -1.93
HMGN3P1-201ENST00000453847 DYNC1I1O14576 645 aa3.02□□□□□ -1.93
HMGN3P1-201ENST00000453847 SRP72O76094 671 aaKnown RBP3.02□□□□□ -1.93
HMGN3P1-201ENST00000453847 FARS2O95363 451 aaKnown RBP3.02□□□□□ -1.93
HMGN3P1-201ENST00000453847 FGFR1OPO95684 399 aaKnown RBP3.02□□□□□ -1.93
HMGN3P1-201ENST00000453847 C6orf47O95873 294 aa3.02□□□□□ -1.93
HMGN3P1-201ENST00000453847 KRT16P08779 473 aa3.02□□□□□ -1.93
HMGN3P1-201ENST00000453847 GABRR2P28476 465 aa3.02□□□□□ -1.93
HMGN3P1-201ENST00000453847 RFC3P40938 356 aa3.02□□□□□ -1.93
HMGN3P1-201ENST00000453847 GPR1P46091 355 aa3.02□□□□□ -1.93
HMGN3P1-201ENST00000453847 PSMD4P55036 377 aaKnown RBP3.02□□□□□ -1.93
HMGN3P1-201ENST00000453847 TAS2R19P59542 299 aa3.02□□□□□ -1.93
HMGN3P1-201ENST00000453847 STXBP1P61764 594 aaKnown RBP3.02□□□□□ -1.93
HMGN3P1-201ENST00000453847 RPS21P63220 83 aaKnown RBP3.02□□□□□ -1.93
HMGN3P1-201ENST00000453847 SP4Q02446 784 aa3.02□□□□□ -1.93
HMGN3P1-201ENST00000453847 MXD1Q05195 221 aa3.02□□□□□ -1.93
HMGN3P1-201ENST00000453847 SIGLEC14Q08ET2 396 aa3.02□□□□□ -1.93
HMGN3P1-201ENST00000453847 CYTH1Q15438 398 aa3.02□□□□□ -1.93
HMGN3P1-201ENST00000453847 ARRDC1Q8N5I2 433 aa3.02□□□□□ -1.93
HMGN3P1-201ENST00000453847 MDS2Q8NDY4 140 aa3.02□□□□□ -1.93
HMGN3P1-201ENST00000453847 TMEM104Q8NE00 496 aa3.02□□□□□ -1.93
HMGN3P1-201ENST00000453847 OR2L2Q8NH16 312 aa3.02□□□□□ -1.93
HMGN3P1-201ENST00000453847 RHOXF1Q8NHV9 184 aa3.02□□□□□ -1.93
HMGN3P1-201ENST00000453847 ISOC2Q96AB3 205 aa3.02□□□□□ -1.93
HMGN3P1-201ENST00000453847 APH1AQ96BI3 265 aa3.02□□□□□ -1.93
HMGN3P1-201ENST00000453847 FOXN4Q96NZ1 517 aa3.02□□□□□ -1.93
HMGN3P1-201ENST00000453847 FOXC2Q99958 501 aa3.02□□□□□ -1.93
HMGN3P1-201ENST00000453847 PRRG3Q9BZD7 231 aa3.02□□□□□ -1.93
HMGN3P1-201ENST00000453847 POLR2J2Q9GZM3 115 aaKnown RBP3.02□□□□□ -1.93
HMGN3P1-201ENST00000453847 POLR2J3Q9H1A7 115 aaKnown RBP3.02□□□□□ -1.93
HMGN3P1-201ENST00000453847 DEFB129Q9H1M3 183 aa3.02□□□□□ -1.93
HMGN3P1-201ENST00000453847 RANBP3Q9H6Z4 567 aaPredicted RBP3.02□□□□□ -1.93
HMGN3P1-201ENST00000453847 RPF2Q9H7B2 306 aaKnown RBP3.02□□□□□ -1.93
HMGN3P1-201ENST00000453847 SIAEQ9HAT2 523 aa3.02□□□□□ -1.93
HMGN3P1-201ENST00000453847 LZTFL1Q9NQ48 299 aa3.02□□□□□ -1.93
HMGN3P1-201ENST00000453847 CTPS2Q9NRF8 586 aa3.02□□□□□ -1.93
HMGN3P1-201ENST00000453847 ZNF107Q9UII5 783 aaPredicted RBP3.02□□□□□ -1.93
HMGN3P1-201ENST00000453847 F11RQ9Y624 299 aaKnown RBP3.02□□□□□ -1.93
HMGN3P1-201ENST00000453847 DENND4AQ7Z401 1863 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms