RNA–Protein interactions for RNA: ENST00000453441.1

COL28A1-205, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 2

Gene COL28A1, Length 700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-205ENST00000453441 MRPS34P82930 218 aaKnown RBP7.64□□□□□ -1.19
COL28A1-205ENST00000453441 PPP2R2BQ00005 443 aa7.64□□□□□ -1.19
COL28A1-205ENST00000453441 CD47Q08722 323 aa7.64□□□□□ -1.19
COL28A1-205ENST00000453441 PPA1Q15181 289 aa7.64□□□□□ -1.19
COL28A1-205ENST00000453441 CEACAM16Q2WEN9 425 aa7.64□□□□□ -1.19
COL28A1-205ENST00000453441 C3orf36Q3SXR2 165 aa7.64□□□□□ -1.19
COL28A1-205ENST00000453441 TBRG1Q3YBR2 411 aa7.64□□□□□ -1.19
COL28A1-205ENST00000453441 SLC36A3Q495N2 470 aa7.64□□□□□ -1.19
COL28A1-205ENST00000453441 MESTQ5EB52 335 aa7.64□□□□□ -1.19
COL28A1-205ENST00000453441 KDM4DQ6B0I6 523 aa7.64□□□□□ -1.19
COL28A1-205ENST00000453441 AMIGO2Q86SJ2 522 aa7.64□□□□□ -1.19
COL28A1-205ENST00000453441 IGFN1Q86VF2 1251 aa7.64□□□□□ -1.19
COL28A1-205ENST00000453441 FAM169BQ8N8A8 192 aa7.64□□□□□ -1.19
COL28A1-205ENST00000453441 ICA1LQ8NDH6 482 aa7.64□□□□□ -1.19
COL28A1-205ENST00000453441 HDAC2Q92769 488 aaKnown RBP7.64□□□□□ -1.19
COL28A1-205ENST00000453441 BCL2L2Q92843 193 aaPredicted RBP7.64□□□□□ -1.19
COL28A1-205ENST00000453441 MCHR2Q969V1 340 aa7.64□□□□□ -1.19
COL28A1-205ENST00000453441 FOXB1Q99853 325 aa7.64□□□□□ -1.19
COL28A1-205ENST00000453441 NIPSNAP1Q9BPW8 284 aa7.64□□□□□ -1.19
COL28A1-205ENST00000453441 TSSK6Q9BXA6 273 aa7.64□□□□□ -1.19
COL28A1-205ENST00000453441 EGLN3Q9H6Z9 239 aa7.64□□□□□ -1.19
COL28A1-205ENST00000453441 DCLRE1BQ9H816 532 aa7.64□□□□□ -1.19
COL28A1-205ENST00000453441 SLC25A19Q9HC21 320 aa7.64□□□□□ -1.19
COL28A1-205ENST00000453441 SLC17A5Q9NRA2 495 aa7.64□□□□□ -1.19
COL28A1-205ENST00000453441 KRT84Q9NSB2 600 aa7.64□□□□□ -1.19
COL28A1-205ENST00000453441 USE1Q9NZ43 259 aa7.64□□□□□ -1.19
COL28A1-205ENST00000453441 REV1Q9UBZ9 1251 aa7.64□□□□□ -1.19
COL28A1-205ENST00000453441 OAZ3Q9UMX2 235 aa7.64□□□□□ -1.19
COL28A1-205ENST00000453441 ADAM18Q9Y3Q7 739 aa7.64□□□□□ -1.19
COL28A1-205ENST00000453441 ADGRG4Q8IZF6 3080 aa7.64□□□□□ -1.19
COL28A1-205ENST00000453441 HECTD1Q9ULT8 2610 aa7.63□□□□□ -1.19
COL28A1-205ENST00000453441 H0YHG0 523 aa7.63□□□□□ -1.19
COL28A1-205ENST00000453441 SOCS2O14508 198 aa7.63□□□□□ -1.19
COL28A1-205ENST00000453441 RRP9O43818 475 aaKnown RBP7.63□□□□□ -1.19
COL28A1-205ENST00000453441 KHDRBS3O75525 346 aaKnown RBP7.63□□□□□ -1.19
COL28A1-205ENST00000453441 UBL3O95164 117 aa7.63□□□□□ -1.19
COL28A1-205ENST00000453441 BAG2O95816 211 aa7.63□□□□□ -1.19
COL28A1-205ENST00000453441 TP53P04637 393 aaPredicted RBP7.63□□□□□ -1.19
COL28A1-205ENST00000453441 OR8G3PP0DMU2 310 aa7.63□□□□□ -1.19
COL28A1-205ENST00000453441 ZNF3P17036 446 aa7.63□□□□□ -1.19
COL28A1-205ENST00000453441 PAICSP22234 425 aaKnown RBP7.63□□□□□ -1.19
COL28A1-205ENST00000453441 PRKACGP22612 351 aa7.63□□□□□ -1.19
COL28A1-205ENST00000453441 CRYGSP22914 178 aa7.63□□□□□ -1.19
COL28A1-205ENST00000453441 IGFBP5P24593 272 aa7.63□□□□□ -1.19
COL28A1-205ENST00000453441 GIPRP48546 466 aa7.63□□□□□ -1.19
COL28A1-205ENST00000453441 ALDH3A2P51648 485 aa7.63□□□□□ -1.19
COL28A1-205ENST00000453441 CRISP1P54107 249 aa7.63□□□□□ -1.19
COL28A1-205ENST00000453441 ARF1P84077 181 aaKnown RBP7.63□□□□□ -1.19
COL28A1-205ENST00000453441 DAG1Q14118 895 aa7.63□□□□□ -1.19
COL28A1-205ENST00000453441 PGGHGQ32M88 737 aa7.63□□□□□ -1.19
COL28A1-205ENST00000453441 BEX5Q5H9J7 111 aa7.63□□□□□ -1.19
COL28A1-205ENST00000453441 CLEC12AQ5QGZ9 265 aa7.63□□□□□ -1.19
COL28A1-205ENST00000453441 LRFN4Q6PJG9 635 aa7.63□□□□□ -1.19
COL28A1-205ENST00000453441 SLC25A47Q6Q0C1 308 aa7.63□□□□□ -1.19
COL28A1-205ENST00000453441 ZNF813Q6ZN06 617 aa7.63□□□□□ -1.19
COL28A1-205ENST00000453441 FOXL2NBQ6ZUU3 175 aa7.63□□□□□ -1.19
COL28A1-205ENST00000453441 ZNF771Q7L3S4 317 aaPredicted RBP7.63□□□□□ -1.19
COL28A1-205ENST00000453441 HS3ST5Q8IZT8 346 aa7.63□□□□□ -1.19
COL28A1-205ENST00000453441 Q8N3U1 123 aa7.63□□□□□ -1.19
COL28A1-205ENST00000453441 PACRGLQ8N7B6 248 aa7.63□□□□□ -1.19
COL28A1-205ENST00000453441 OR8D4Q8NGM9 314 aa7.63□□□□□ -1.19
COL28A1-205ENST00000453441 OR2T4Q8NH00 348 aa7.63□□□□□ -1.19
COL28A1-205ENST00000453441 EME1Q96AY2 570 aa7.63□□□□□ -1.19
COL28A1-205ENST00000453441 RDH12Q96NR8 316 aa7.63□□□□□ -1.19
COL28A1-205ENST00000453441 WFIKKN1Q96NZ8 548 aa7.63□□□□□ -1.19
COL28A1-205ENST00000453441 SLC38A2Q96QD8 506 aa7.63□□□□□ -1.19
COL28A1-205ENST00000453441 GABARAPL3Q9BY60 117 aa7.63□□□□□ -1.19
COL28A1-205ENST00000453441 RACGAP1Q9H0H5 632 aa7.63□□□□□ -1.19
COL28A1-205ENST00000453441 SEMA6AQ9H2E6 1030 aa7.63□□□□□ -1.19
COL28A1-205ENST00000453441 KCNN2Q9H2S1 579 aa7.63□□□□□ -1.19
COL28A1-205ENST00000453441 C1orf198Q9H425 327 aa7.63□□□□□ -1.19
COL28A1-205ENST00000453441 ESRP2Q9H6T0 727 aaKnown RBP7.63□□□□□ -1.19
COL28A1-205ENST00000453441 SIAEQ9HAT2 523 aa7.63□□□□□ -1.19
COL28A1-205ENST00000453441 CMC2Q9NRP2 79 aa7.63□□□□□ -1.19
COL28A1-205ENST00000453441 TMEM38BQ9NVV0 291 aa7.63□□□□□ -1.19
COL28A1-205ENST00000453441 CRIM1Q9NZV1 1036 aa7.63□□□□□ -1.19
COL28A1-205ENST00000453441 FKBP7Q9Y680 259 aa7.63□□□□□ -1.19
COL28A1-205ENST00000453441 FLNBO75369 2602 aaKnown RBP7.62□□□□□ -1.19
COL28A1-205ENST00000453441 SAC3D1A6NKF1 404 aa7.62□□□□□ -1.19
COL28A1-205ENST00000453441 SOX14O95416 240 aa7.62□□□□□ -1.19
COL28A1-205ENST00000453441 ALPLP05186 524 aa7.62□□□□□ -1.19
COL28A1-205ENST00000453441 ANPEPP15144 967 aa7.62□□□□□ -1.19
COL28A1-205ENST00000453441 HIST1H1CP16403 213 aaKnown RBP7.62□□□□□ -1.19
COL28A1-205ENST00000453441 POU1F1P28069 291 aa7.62□□□□□ -1.19
COL28A1-205ENST00000453441 ARR3P36575 388 aa7.62□□□□□ -1.19
COL28A1-205ENST00000453441 PTDSS1P48651 473 aaKnown RBP7.62□□□□□ -1.19
COL28A1-205ENST00000453441 DAPP51397 102 aa7.62□□□□□ -1.19
COL28A1-205ENST00000453441 SLC25A1P53007 311 aa7.62□□□□□ -1.19
COL28A1-205ENST00000453441 PCBD1P61457 104 aa7.62□□□□□ -1.19
COL28A1-205ENST00000453441 ELF3P78545 371 aaPredicted RBP7.62□□□□□ -1.19
COL28A1-205ENST00000453441 CDK5Q00535 292 aa7.62□□□□□ -1.19
COL28A1-205ENST00000453441 MYBPC1Q00872 1141 aa7.62□□□□□ -1.19
COL28A1-205ENST00000453441 GLO1Q04760 184 aa7.62□□□□□ -1.19
COL28A1-205ENST00000453441 RUNX1T1Q06455 604 aa7.62□□□□□ -1.19
COL28A1-205ENST00000453441 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.62□□□□□ -1.19
COL28A1-205ENST00000453441 LGALS3BPQ08380 585 aa7.62□□□□□ -1.19
COL28A1-205ENST00000453441 GINS1Q14691 196 aa7.62□□□□□ -1.19
COL28A1-205ENST00000453441 RCN1Q15293 331 aa7.62□□□□□ -1.19
COL28A1-205ENST00000453441 TAB1Q15750 504 aa7.62□□□□□ -1.19
COL28A1-205ENST00000453441 SLC36A2Q495M3 483 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms