RNA–Protein interactions for RNA: ENST00000453259.2

LYSMD3-202, Transcript of LysM domain containing 3, humanhuman

TSL 3

Gene LYSMD3, Length 553 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-202ENST00000453259 ZNF362Q5T0B9 420 aaPredicted RBP12.09□□□□□ -0.47
LYSMD3-202ENST00000453259 C10orf128Q5T292 105 aa12.09□□□□□ -0.47
LYSMD3-202ENST00000453259 CROCCP2Q86T23 111 aa12.09□□□□□ -0.47
LYSMD3-202ENST00000453259 COMTD1Q86VU5 262 aa12.09□□□□□ -0.47
LYSMD3-202ENST00000453259 ARMC8Q8IUR7 673 aa12.09□□□□□ -0.47
LYSMD3-202ENST00000453259 NFKBIDQ8NI38 313 aa12.09□□□□□ -0.47
LYSMD3-202ENST00000453259 MARS2Q96GW9 593 aaKnown RBP12.09□□□□□ -0.47
LYSMD3-202ENST00000453259 MPP4Q96JB8 637 aa12.09□□□□□ -0.47
LYSMD3-202ENST00000453259 SIAEQ9HAT2 523 aa12.09□□□□□ -0.47
LYSMD3-202ENST00000453259 TUBG2Q9NRH3 451 aa12.09□□□□□ -0.47
LYSMD3-202ENST00000453259 TAS2R5Q9NYW4 299 aa12.09□□□□□ -0.47
LYSMD3-202ENST00000453259 NPTNQ9Y639 398 aa12.09□□□□□ -0.47
LYSMD3-202ENST00000453259 CACNG2Q9Y698 323 aa12.09□□□□□ -0.47
LYSMD3-202ENST00000453259 C11orf98E9PRG8 122 aa12.08□□□□□ -0.48
LYSMD3-202ENST00000453259 TPST1O60507 370 aa12.08□□□□□ -0.48
LYSMD3-202ENST00000453259 IGHV2-70P01814 119 aa12.08□□□□□ -0.48
LYSMD3-202ENST00000453259 HIST1H2ABP04908 130 aa12.08□□□□□ -0.48
LYSMD3-202ENST00000453259 CCL2P13500 99 aa12.08□□□□□ -0.48
LYSMD3-202ENST00000453259 TNFRSF1AP19438 455 aa12.08□□□□□ -0.48
LYSMD3-202ENST00000453259 MAKP20794 623 aa12.08□□□□□ -0.48
LYSMD3-202ENST00000453259 CLRN1P58418 232 aa12.08□□□□□ -0.48
LYSMD3-202ENST00000453259 HIST3H2AQ7L7L0 130 aa12.08□□□□□ -0.48
LYSMD3-202ENST00000453259 ICA1LQ8NDH6 482 aa12.08□□□□□ -0.48
LYSMD3-202ENST00000453259 NOXO1Q8NFA2 376 aa12.08□□□□□ -0.48
LYSMD3-202ENST00000453259 IPCEF1Q8WWN9 437 aaPredicted RBP12.08□□□□□ -0.48
LYSMD3-202ENST00000453259 HIST1H2ACQ93077 130 aa12.08□□□□□ -0.48
LYSMD3-202ENST00000453259 C1orf147Q96MC9 270 aaPredicted RBP12.08□□□□□ -0.48
LYSMD3-202ENST00000453259 RSPO3Q9BXY4 272 aaPredicted RBP12.08□□□□□ -0.48
LYSMD3-202ENST00000453259 MRPL13Q9BYD1 178 aaKnown RBP12.08□□□□□ -0.48
LYSMD3-202ENST00000453259 OR51B6Q9H340 312 aa12.08□□□□□ -0.48
LYSMD3-202ENST00000453259 PATZ1Q9HBE1 687 aaKnown RBP12.08□□□□□ -0.48
LYSMD3-202ENST00000453259 UBAP1Q9NZ09 502 aa12.08□□□□□ -0.48
LYSMD3-202ENST00000453259 ZNF69Q9UC07 566 aa12.08□□□□□ -0.48
LYSMD3-202ENST00000453259 INSIG2Q9Y5U4 225 aa12.08□□□□□ -0.48
LYSMD3-202ENST00000453259 TANC2Q9HCD6 1990 aa12.08□□□□□ -0.48
LYSMD3-202ENST00000453259 A0A1W2PRG6 482 aa12.07□□□□□ -0.48
LYSMD3-202ENST00000453259 NPIPB13A6NJU9 1138 aa12.07□□□□□ -0.48
LYSMD3-202ENST00000453259 NPIPB4C9JG80 1138 aa12.07□□□□□ -0.48
LYSMD3-202ENST00000453259 LRRN3E7EW58 273 aa12.07□□□□□ -0.48
LYSMD3-202ENST00000453259 IFNL4K9M1U5 179 aa12.07□□□□□ -0.48
LYSMD3-202ENST00000453259 SPRY3O43610 288 aa12.07□□□□□ -0.48
LYSMD3-202ENST00000453259 TPST2O60704 377 aa12.07□□□□□ -0.48
LYSMD3-202ENST00000453259 ASAH2BP0C7U1 165 aa12.07□□□□□ -0.48
LYSMD3-202ENST00000453259 GPX2P18283 190 aa12.07□□□□□ -0.48
LYSMD3-202ENST00000453259 TNFSF4P23510 183 aa12.07□□□□□ -0.48
LYSMD3-202ENST00000453259 ZFP36P26651 326 aaKnown RBP12.07□□□□□ -0.48
LYSMD3-202ENST00000453259 SLC6A9P48067 706 aa12.07□□□□□ -0.48
LYSMD3-202ENST00000453259 DAP3P51398 398 aaKnown RBP12.07□□□□□ -0.48
LYSMD3-202ENST00000453259 STX1BP61266 288 aa12.07□□□□□ -0.48
LYSMD3-202ENST00000453259 VSNL1P62760 191 aa12.07□□□□□ -0.48
LYSMD3-202ENST00000453259 GLO1Q04760 184 aa12.07□□□□□ -0.48
LYSMD3-202ENST00000453259 SCARB2Q14108 478 aa12.07□□□□□ -0.48
LYSMD3-202ENST00000453259 TNFAIP8L3Q5GJ75 292 aa12.07□□□□□ -0.48
LYSMD3-202ENST00000453259 PABPC1L2AQ5JQF8 200 aa12.07□□□□□ -0.48
LYSMD3-202ENST00000453259 CEP85LQ5SZL2 805 aa12.07□□□□□ -0.48
LYSMD3-202ENST00000453259 FAM205BPQ63HN1 556 aa12.07□□□□□ -0.48
LYSMD3-202ENST00000453259 LEG1Q6P5S2 330 aa12.07□□□□□ -0.48
LYSMD3-202ENST00000453259 TTC33Q6PID6 262 aaPredicted RBP12.07□□□□□ -0.48
LYSMD3-202ENST00000453259 ARL9Q6T311 187 aa12.07□□□□□ -0.48
LYSMD3-202ENST00000453259 MUC20Q8N307 709 aaPredicted RBP12.07□□□□□ -0.48
LYSMD3-202ENST00000453259 HIPK4Q8NE63 616 aa12.07□□□□□ -0.48
LYSMD3-202ENST00000453259 KLF14Q8TD94 323 aaPredicted RBP12.07□□□□□ -0.48
LYSMD3-202ENST00000453259 MCHR2Q969V1 340 aa12.07□□□□□ -0.48
LYSMD3-202ENST00000453259 POM121L2Q96KW2 1035 aa12.07□□□□□ -0.48
LYSMD3-202ENST00000453259 MCHR1Q99705 422 aa12.07□□□□□ -0.48
LYSMD3-202ENST00000453259 ZNF426Q9BUY5 554 aa12.07□□□□□ -0.48
LYSMD3-202ENST00000453259 MS4A7Q9GZW8 240 aaPredicted RBP12.07□□□□□ -0.48
LYSMD3-202ENST00000453259 KCNK9Q9NPC2 374 aa12.07□□□□□ -0.48
LYSMD3-202ENST00000453259 CCNB1IP1Q9NPC3 277 aa12.07□□□□□ -0.48
LYSMD3-202ENST00000453259 SLC25A37Q9NYZ2 338 aa12.07□□□□□ -0.48
LYSMD3-202ENST00000453259 OR5V1Q9UGF6 321 aa12.07□□□□□ -0.48
LYSMD3-202ENST00000453259 KLHL21Q9UJP4 597 aa12.07□□□□□ -0.48
LYSMD3-202ENST00000453259 ANGPT4Q9Y264 503 aa12.07□□□□□ -0.48
LYSMD3-202ENST00000453259 LRCH1Q9Y2L9 728 aa12.07□□□□□ -0.48
LYSMD3-202ENST00000453259 ZSCAN5BA6NJL1 495 aa12.06□□□□□ -0.48
LYSMD3-202ENST00000453259 EVPLLA8MZ36 301 aa12.06□□□□□ -0.48
LYSMD3-202ENST00000453259 ZNF500O60304 480 aaPredicted RBP12.06□□□□□ -0.48
LYSMD3-202ENST00000453259 IGF2P01344 180 aa12.06□□□□□ -0.48
LYSMD3-202ENST00000453259 GDI2P50395 445 aaKnown RBP12.06□□□□□ -0.48
LYSMD3-202ENST00000453259 ARHGDIAP52565 204 aa12.06□□□□□ -0.48
LYSMD3-202ENST00000453259 BPIFB3P59826 476 aa12.06□□□□□ -0.48
LYSMD3-202ENST00000453259 MPP2Q14168 576 aa12.06□□□□□ -0.48
LYSMD3-202ENST00000453259 SLC9A3R2Q15599 337 aa12.06□□□□□ -0.48
LYSMD3-202ENST00000453259 ESCO2Q56NI9 601 aa12.06□□□□□ -0.48
LYSMD3-202ENST00000453259 KLF17Q5JT82 389 aaPredicted RBP12.06□□□□□ -0.48
LYSMD3-202ENST00000453259 WDR93Q6P2C0 686 aa12.06□□□□□ -0.48
LYSMD3-202ENST00000453259 SLC2A7Q6PXP3 512 aa12.06□□□□□ -0.48
LYSMD3-202ENST00000453259 NANOGNBQ7Z5D8 188 aa12.06□□□□□ -0.48
LYSMD3-202ENST00000453259 LRRC28Q86X40 367 aaPredicted RBP12.06□□□□□ -0.48
LYSMD3-202ENST00000453259 ALDH16A1Q8IZ83 802 aa12.06□□□□□ -0.48
LYSMD3-202ENST00000453259 ZNF101Q8IZC7 436 aa12.06□□□□□ -0.48
LYSMD3-202ENST00000453259 ZNF283Q8N7M2 679 aa12.06□□□□□ -0.48
LYSMD3-202ENST00000453259 OR9I1Q8NGQ6 314 aa12.06□□□□□ -0.48
LYSMD3-202ENST00000453259 VANGL1Q8TAA9 524 aaPredicted RBP12.06□□□□□ -0.48
LYSMD3-202ENST00000453259 FNDC8Q8TC99 324 aa12.06□□□□□ -0.48
LYSMD3-202ENST00000453259 SAMD8Q96LT4 415 aa12.06□□□□□ -0.48
LYSMD3-202ENST00000453259 ARHGDIGQ99819 225 aa12.06□□□□□ -0.48
LYSMD3-202ENST00000453259 ELOVL3Q9HB03 270 aa12.06□□□□□ -0.48
LYSMD3-202ENST00000453259 TMEM106BQ9NUM4 274 aa12.06□□□□□ -0.48
LYSMD3-202ENST00000453259 VWFP04275 2813 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms