RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 STK36Q9NRP7 1315 aa3.78□□□□□ -1.8
HMGB3P21-201ENST00000452483 TRBV5-3A0A0A0MS03 114 aa3.78□□□□□ -1.8
HMGB3P21-201ENST00000452483 A0A0G2JK05 382 aa3.78□□□□□ -1.8
HMGB3P21-201ENST00000452483 LOC101059948A0A1B0GTJ6 334 aa3.78□□□□□ -1.8
HMGB3P21-201ENST00000452483 A0A1B0GU03 582 aa3.78□□□□□ -1.8
HMGB3P21-201ENST00000452483 A0A1B0GV72 72 aa3.78□□□□□ -1.8
HMGB3P21-201ENST00000452483 ANKRD20A5PA0PJZ0 165 aa3.78□□□□□ -1.8
HMGB3P21-201ENST00000452483 PRSS44E7EML9 344 aa3.78□□□□□ -1.8
HMGB3P21-201ENST00000452483 H7C2Y5 167 aa3.78□□□□□ -1.8
HMGB3P21-201ENST00000452483 J3QLI3 93 aa3.78□□□□□ -1.8
HMGB3P21-201ENST00000452483 PSMD12O00232 456 aaPredicted RBP3.78□□□□□ -1.8
HMGB3P21-201ENST00000452483 CDC7O00311 574 aa3.78□□□□□ -1.8
HMGB3P21-201ENST00000452483 PFDN6O15212 129 aa3.78□□□□□ -1.8
HMGB3P21-201ENST00000452483 SIGLEC5O15389 551 aa3.78□□□□□ -1.8
HMGB3P21-201ENST00000452483 MPZL2O60487 215 aa3.78□□□□□ -1.8
HMGB3P21-201ENST00000452483 CLDN11O75508 207 aa3.78□□□□□ -1.8
HMGB3P21-201ENST00000452483 EEDO75530 441 aaKnown RBP3.78□□□□□ -1.8
HMGB3P21-201ENST00000452483 GLSO94925 669 aaPredicted RBP3.78□□□□□ -1.8
HMGB3P21-201ENST00000452483 CTDNEP1O95476 244 aa3.78□□□□□ -1.8
HMGB3P21-201ENST00000452483 ISG15P05161 165 aa3.78□□□□□ -1.8
HMGB3P21-201ENST00000452483 CCDC166P0CW27 439 aa3.78□□□□□ -1.8
HMGB3P21-201ENST00000452483 FGF3P11487 239 aaPredicted RBP3.78□□□□□ -1.8
HMGB3P21-201ENST00000452483 ZNF35P13682 527 aa3.78□□□□□ -1.8
HMGB3P21-201ENST00000452483 CSNK2A2P19784 350 aaPredicted RBP3.78□□□□□ -1.8
HMGB3P21-201ENST00000452483 CELP19835 753 aa3.78□□□□□ -1.8
HMGB3P21-201ENST00000452483 COX5AP20674 150 aa3.78□□□□□ -1.8
HMGB3P21-201ENST00000452483 ATP6V1B2P21281 511 aa3.78□□□□□ -1.8
HMGB3P21-201ENST00000452483 PROZP22891 400 aa3.78□□□□□ -1.8
HMGB3P21-201ENST00000452483 SAA4P35542 130 aa3.78□□□□□ -1.8
HMGB3P21-201ENST00000452483 OR3A2P47893 321 aa3.78□□□□□ -1.8
HMGB3P21-201ENST00000452483 ERFP50548 548 aa3.78□□□□□ -1.8
HMGB3P21-201ENST00000452483 FBXW4P57775 412 aa3.78□□□□□ -1.8
HMGB3P21-201ENST00000452483 RPL31P62899 125 aaKnown RBP3.78□□□□□ -1.8
HMGB3P21-201ENST00000452483 PAFAH1B2P68402 229 aa3.78□□□□□ -1.8
HMGB3P21-201ENST00000452483 HMGCS1Q01581 520 aa3.78□□□□□ -1.8
HMGB3P21-201ENST00000452483 OXA1LQ15070 435 aa3.78□□□□□ -1.8
HMGB3P21-201ENST00000452483 PGGHGQ32M88 737 aa3.78□□□□□ -1.8
HMGB3P21-201ENST00000452483 TMEM176BQ3YBM2 270 aaPredicted RBP3.78□□□□□ -1.8
HMGB3P21-201ENST00000452483 CCDC58Q4VC31 144 aa3.78□□□□□ -1.8
HMGB3P21-201ENST00000452483 OR10J3Q5JRS4 329 aa3.78□□□□□ -1.8
HMGB3P21-201ENST00000452483 SPANXN4Q5MJ08 99 aa3.78□□□□□ -1.8
HMGB3P21-201ENST00000452483 HES5Q5TA89 166 aa3.78□□□□□ -1.8
HMGB3P21-201ENST00000452483 RESP18Q5W5W9 173 aa3.78□□□□□ -1.8
HMGB3P21-201ENST00000452483 TRNP1Q6NT89 227 aa3.78□□□□□ -1.8
HMGB3P21-201ENST00000452483 ZNF544Q6NX49 715 aa3.78□□□□□ -1.8
HMGB3P21-201ENST00000452483 FAM131AQ6UXB0 335 aa3.78□□□□□ -1.8
HMGB3P21-201ENST00000452483 RBMS3Q6XE24 437 aaKnown RBP3.78□□□□□ -1.8
HMGB3P21-201ENST00000452483 ZNF782Q6ZMW2 699 aaPredicted RBP3.78□□□□□ -1.8
HMGB3P21-201ENST00000452483 ZNF793Q6ZN11 406 aa3.78□□□□□ -1.8
HMGB3P21-201ENST00000452483 Q6ZNX1 250 aa3.78□□□□□ -1.8
HMGB3P21-201ENST00000452483 ASB18Q6ZVZ8 466 aa3.78□□□□□ -1.8
HMGB3P21-201ENST00000452483 TMED4Q7Z7H5 227 aa3.78□□□□□ -1.8
HMGB3P21-201ENST00000452483 MRPL52Q86TS9 123 aaKnown RBP3.78□□□□□ -1.8
HMGB3P21-201ENST00000452483 FAM71AQ8IYT1 594 aa3.78□□□□□ -1.8
HMGB3P21-201ENST00000452483 VKORC1L1Q8N0U8 176 aa3.78□□□□□ -1.8
HMGB3P21-201ENST00000452483 PUSL1Q8N0Z8 303 aaKnown RBP3.78□□□□□ -1.8
HMGB3P21-201ENST00000452483 STK40Q8N2I9 435 aa3.78□□□□□ -1.8
HMGB3P21-201ENST00000452483 WDR31Q8NA23 367 aa3.78□□□□□ -1.8
HMGB3P21-201ENST00000452483 DUSP18Q8NEJ0 188 aa3.78□□□□□ -1.8
HMGB3P21-201ENST00000452483 PXT1Q8NFP0 134 aa3.78□□□□□ -1.8
HMGB3P21-201ENST00000452483 OR5L1Q8NGL2 311 aa3.78□□□□□ -1.8
HMGB3P21-201ENST00000452483 OR2V1Q8NHB1 315 aa3.78□□□□□ -1.8
HMGB3P21-201ENST00000452483 FAM45AQ8TCE6 357 aa3.78□□□□□ -1.8
HMGB3P21-201ENST00000452483 TBCKQ8TEA7 893 aa3.78□□□□□ -1.8
HMGB3P21-201ENST00000452483 TMEM174Q8WUU8 243 aa3.78□□□□□ -1.8
HMGB3P21-201ENST00000452483 TFB1MQ8WVM0 346 aaKnown RBP3.78□□□□□ -1.8
HMGB3P21-201ENST00000452483 DNASE2BQ8WZ79 361 aa3.78□□□□□ -1.8
HMGB3P21-201ENST00000452483 MRPS31Q92665 395 aaKnown RBP3.78□□□□□ -1.8
HMGB3P21-201ENST00000452483 ANKRD9Q96BM1 317 aaPredicted RBP3.78□□□□□ -1.8
HMGB3P21-201ENST00000452483 TESCQ96BS2 214 aa3.78□□□□□ -1.8
HMGB3P21-201ENST00000452483 HSFY1Q96LI6 401 aa3.78□□□□□ -1.8
HMGB3P21-201ENST00000452483 Q96MT0 163 aa3.78□□□□□ -1.8
HMGB3P21-201ENST00000452483 BBC3Q96PG8 261 aaPredicted RBP3.78□□□□□ -1.8
HMGB3P21-201ENST00000452483 OR5B12Q96R08 314 aa3.78□□□□□ -1.8
HMGB3P21-201ENST00000452483 PHB2Q99623 299 aa3.78□□□□□ -1.8
HMGB3P21-201ENST00000452483 UBE2ZQ9H832 354 aaPredicted RBP3.78□□□□□ -1.8
HMGB3P21-201ENST00000452483 TMEM27Q9HBJ8 222 aa3.78□□□□□ -1.8
HMGB3P21-201ENST00000452483 SPANXB1Q9NS25 103 aaPredicted RBP3.78□□□□□ -1.8
HMGB3P21-201ENST00000452483 CMTM6Q9NX76 183 aa3.78□□□□□ -1.8
HMGB3P21-201ENST00000452483 THUMPD1Q9NXG2 353 aaKnown RBP3.78□□□□□ -1.8
HMGB3P21-201ENST00000452483 VNN3Q9NY84 501 aa3.78□□□□□ -1.8
HMGB3P21-201ENST00000452483 C11orf21Q9P2W6 132 aa3.78□□□□□ -1.8
HMGB3P21-201ENST00000452483 LGALS13Q9UHV8 139 aa3.78□□□□□ -1.8
HMGB3P21-201ENST00000452483 AGO1Q9UL18 857 aaKnown RBP3.78□□□□□ -1.8
HMGB3P21-201ENST00000452483 EIF3AQ14152 1382 aaKnown RBP3.77□□□□□ -1.81
HMGB3P21-201ENST00000452483 TNRQ92752 1358 aa3.77□□□□□ -1.81
HMGB3P21-201ENST00000452483 WDR17Q8IZU2 1322 aa3.77□□□□□ -1.81
HMGB3P21-201ENST00000452483 GAGE12JA6NER3 117 aa3.77□□□□□ -1.81
HMGB3P21-201ENST00000452483 SRRM3A6NNA2 597 aaPredicted RBP3.77□□□□□ -1.81
HMGB3P21-201ENST00000452483 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.77□□□□□ -1.81
HMGB3P21-201ENST00000452483 FGF16O43320 207 aa3.77□□□□□ -1.81
HMGB3P21-201ENST00000452483 DUSP11O75319 330 aaKnown RBP3.77□□□□□ -1.81
HMGB3P21-201ENST00000452483 GATBO75879 557 aaKnown RBP3.77□□□□□ -1.81
HMGB3P21-201ENST00000452483 HPP00738 406 aa3.77□□□□□ -1.81
HMGB3P21-201ENST00000452483 IFNA16P05015 189 aa3.77□□□□□ -1.81
HMGB3P21-201ENST00000452483 C2P06681 752 aa3.77□□□□□ -1.81
HMGB3P21-201ENST00000452483 EGR2P11161 476 aaPredicted RBP3.77□□□□□ -1.81
HMGB3P21-201ENST00000452483 FUT3P21217 361 aa3.77□□□□□ -1.81
HMGB3P21-201ENST00000452483 LMO1P25800 156 aa3.77□□□□□ -1.81
HMGB3P21-201ENST00000452483 IL12AP29459 219 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms